RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 IRX5P78411 483 aaPredicted RBP6.66□□□□□ -1.34
COPS3-211ENST00000495640 ARHGEF1Q92888 912 aaKnown RBP6.66□□□□□ -1.34
COPS3-211ENST00000495640 TMEM106CQ9BVX2 250 aa6.64□□□□□ -1.35
COPS3-211ENST00000495640 TESPA1A2RU30 521 aaPredicted RBP6.63□□□□□ -1.35
COPS3-211ENST00000495640 BRPF1P55201 1214 aaPredicted RBP6.63□□□□□ -1.35
COPS3-211ENST00000495640 EFCAB3Q8N7B9 438 aa6.63□□□□□ -1.35
COPS3-211ENST00000495640 NCKAP5LQ9HCH0 1330 aa6.62□□□□□ -1.35
COPS3-211ENST00000495640 ST18O60284 1047 aa6.62□□□□□ -1.35
COPS3-211ENST00000495640 E2F4Q16254 413 aa6.62□□□□□ -1.35
COPS3-211ENST00000495640 ZC3H15Q8WU90 426 aaKnown RBP6.62□□□□□ -1.35
COPS3-211ENST00000495640 PHF8Q9UPP1 1060 aa6.62□□□□□ -1.35
COPS3-211ENST00000495640 SOX12O15370 315 aa6.61□□□□□ -1.35
COPS3-211ENST00000495640 NLRP6P59044 892 aa6.61□□□□□ -1.35
COPS3-211ENST00000495640 CDAN1Q8IWY9 1227 aa6.61□□□□□ -1.35
COPS3-211ENST00000495640 SLAIN1Q8ND83 568 aa6.61□□□□□ -1.35
COPS3-211ENST00000495640 SEMA3EO15041 775 aa6.6□□□□□ -1.35
COPS3-211ENST00000495640 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
COPS3-211ENST00000495640 CABP2Q9NPB3 220 aa6.6□□□□□ -1.35
COPS3-211ENST00000495640 MS4A4AQ96JQ5 239 aa6.59□□□□□ -1.35
COPS3-211ENST00000495640 PLCG2P16885 1265 aa6.58□□□□□ -1.36
COPS3-211ENST00000495640 MFSD10Q14728 455 aa6.58□□□□□ -1.36
COPS3-211ENST00000495640 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
COPS3-211ENST00000495640 CRISPLD2Q9H0B8 497 aa6.57□□□□□ -1.36
COPS3-211ENST00000495640 OCEL1Q9H607 264 aa6.56□□□□□ -1.36
COPS3-211ENST00000495640 ZMYND10O75800 440 aa6.55□□□□□ -1.36
COPS3-211ENST00000495640 PDCD7Q8N8D1 485 aaKnown RBP6.55□□□□□ -1.36
COPS3-211ENST00000495640 SLC24A3Q9HC58 644 aa6.55□□□□□ -1.36
COPS3-211ENST00000495640 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
COPS3-211ENST00000495640 LARP6Q9BRS8 491 aaKnown RBP6.53□□□□□ -1.36
COPS3-211ENST00000495640 PDE4AP27815 886 aa6.52□□□□□ -1.37
COPS3-211ENST00000495640 ARXQ96QS3 562 aa6.52□□□□□ -1.37
COPS3-211ENST00000495640 NEUROD2Q15784 382 aa6.51□□□□□ -1.37
COPS3-211ENST00000495640 TMEM121BQ9BXQ6 578 aaPredicted RBP6.51□□□□□ -1.37
COPS3-211ENST00000495640 BARGINQ6ZT62 677 aa6.5□□□□□ -1.37
COPS3-211ENST00000495640 C14orf37Q86TY3 774 aa6.5□□□□□ -1.37
COPS3-211ENST00000495640 DDX27Q96GQ7 796 aaKnown RBP6.5□□□□□ -1.37
COPS3-211ENST00000495640 MMRN1Q13201 1228 aa6.49□□□□□ -1.37
COPS3-211ENST00000495640 ILDR1Q86SU0 546 aaPredicted RBP6.49□□□□□ -1.37
COPS3-211ENST00000495640 SPNS2Q8IVW8 549 aa6.49□□□□□ -1.37
COPS3-211ENST00000495640 MARVELD3Q96A59 401 aa6.48□□□□□ -1.37
COPS3-211ENST00000495640 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.48□□□□□ -1.37
COPS3-211ENST00000495640 POTEB3A0JP26 581 aa6.47□□□□□ -1.37
COPS3-211ENST00000495640 SMYD5Q6GMV2 418 aa6.47□□□□□ -1.37
COPS3-211ENST00000495640 POTEBQ6S5H4 581 aa6.47□□□□□ -1.37
COPS3-211ENST00000495640 MLLT3P42568 568 aaPredicted RBP6.45□□□□□ -1.38
COPS3-211ENST00000495640 SNPHO15079 494 aa6.44□□□□□ -1.38
COPS3-211ENST00000495640 RBM26Q5T8P6 1007 aaKnown RBP6.44□□□□□ -1.38
COPS3-211ENST00000495640 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
COPS3-211ENST00000495640 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
COPS3-211ENST00000495640 PPP1R15BQ5SWA1 713 aa6.42□□□□□ -1.38
COPS3-211ENST00000495640 GPHNQ9NQX3 736 aaPredicted RBP6.42□□□□□ -1.38
COPS3-211ENST00000495640 EMILIN3Q9NT22 766 aa6.42□□□□□ -1.38
COPS3-211ENST00000495640 DPY19L2Q6NUT2 758 aa6.41□□□□□ -1.38
COPS3-211ENST00000495640 GPIHBP1Q8IV16 184 aa6.41□□□□□ -1.38
COPS3-211ENST00000495640 AK7Q96M32 723 aa6.41□□□□□ -1.38
COPS3-211ENST00000495640 GPBP1L1Q9HC44 474 aaPredicted RBP6.41□□□□□ -1.38
COPS3-211ENST00000495640 GOLGA2Q08379 1002 aa6.4□□□□□ -1.38
COPS3-211ENST00000495640 C3orf67Q6ZVT6 689 aa6.4□□□□□ -1.38
COPS3-211ENST00000495640 L3MBTL3Q96JM7 780 aaPredicted RBP6.4□□□□□ -1.38
COPS3-211ENST00000495640 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.4□□□□□ -1.38
COPS3-211ENST00000495640 GPR37O15354 613 aa6.39□□□□□ -1.39
COPS3-211ENST00000495640 EMP3P54852 163 aa6.39□□□□□ -1.39
COPS3-211ENST00000495640 MKRN3Q13064 507 aaKnown RBP6.39□□□□□ -1.39
COPS3-211ENST00000495640 PDIA6Q15084 440 aa6.39□□□□□ -1.39
COPS3-211ENST00000495640 DPYSL4O14531 572 aa6.38□□□□□ -1.39
COPS3-211ENST00000495640 HOXB3P14651 431 aaPredicted RBP6.38□□□□□ -1.39
COPS3-211ENST00000495640 DSG2Q14126 1118 aa6.38□□□□□ -1.39
COPS3-211ENST00000495640 HS3ST6Q96QI5 342 aa6.38□□□□□ -1.39
COPS3-211ENST00000495640 TRIM66O15016 1216 aa6.37□□□□□ -1.39
COPS3-211ENST00000495640 HOMEZQ8IX15 550 aa6.37□□□□□ -1.39
COPS3-211ENST00000495640 KDM4CQ9H3R0 1056 aa6.37□□□□□ -1.39
COPS3-211ENST00000495640 SPDYE16A6NNV3 312 aaPredicted RBP6.36□□□□□ -1.39
COPS3-211ENST00000495640 FOXK1P85037 733 aa6.36□□□□□ -1.39
COPS3-211ENST00000495640 FAM205CA6NFA0 338 aa6.35□□□□□ -1.39
COPS3-211ENST00000495640 PDE4DQ08499 809 aa6.35□□□□□ -1.39
COPS3-211ENST00000495640 MICALL2Q8IY33 904 aa6.35□□□□□ -1.39
COPS3-211ENST00000495640 SUPT5HO00267 1087 aaKnown RBP6.34□□□□□ -1.39
COPS3-211ENST00000495640 KIF3CO14782 793 aa6.33□□□□□ -1.4
COPS3-211ENST00000495640 KRI1Q8N9T8 703 aaKnown RBP6.33□□□□□ -1.4
COPS3-211ENST00000495640 IL27Q8NEV9 243 aa6.33□□□□□ -1.4
COPS3-211ENST00000495640 DAXXQ9UER7 740 aaPredicted RBP6.33□□□□□ -1.4
COPS3-211ENST00000495640 BOLA1Q9Y3E2 137 aa6.32□□□□□ -1.4
COPS3-211ENST00000495640 HOXB1P14653 301 aaPredicted RBP6.3□□□□□ -1.4
COPS3-211ENST00000495640 C2orf72A6NCS6 295 aa6.29□□□□□ -1.4
COPS3-211ENST00000495640 TMEM92Q6UXU6 159 aa6.29□□□□□ -1.4
COPS3-211ENST00000495640 PLPP6Q8IY26 295 aa6.29□□□□□ -1.4
COPS3-211ENST00000495640 TMC2Q8TDI7 906 aa6.29□□□□□ -1.4
COPS3-211ENST00000495640 FAM117AQ9C073 453 aa6.29□□□□□ -1.4
COPS3-211ENST00000495640 MINK1Q8N4C8 1332 aaPredicted RBP6.28□□□□□ -1.4
COPS3-211ENST00000495640 PLEKHG3A1L390 1219 aa6.28□□□□□ -1.4
COPS3-211ENST00000495640 OSBPP22059 807 aa6.28□□□□□ -1.4
COPS3-211ENST00000495640 MAP2K5Q13163 448 aa6.28□□□□□ -1.4
COPS3-211ENST00000495640 AMHR2Q16671 573 aa6.28□□□□□ -1.4
COPS3-211ENST00000495640 CCDC102AQ96A19 550 aa6.27□□□□□ -1.41
COPS3-211ENST00000495640 ZMYND15Q9H091 742 aa6.27□□□□□ -1.41
COPS3-211ENST00000495640 IRF6O14896 467 aa6.26□□□□□ -1.41
COPS3-211ENST00000495640 PTGER2P43116 358 aa6.26□□□□□ -1.41
COPS3-211ENST00000495640 PARP9Q8IXQ6 854 aa6.26□□□□□ -1.41
COPS3-211ENST00000495640 FECHP22830 423 aa6.25□□□□□ -1.41
COPS3-211ENST00000495640 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms