RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 ARID4BQ4LE39 1312 aaPredicted RBP22.99■■□□□ 1.27
RPRD1B-206ENST00000495457 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
RPRD1B-206ENST00000495457 ARHGAP5Q13017 1502 aa22.98■■□□□ 1.27
RPRD1B-206ENST00000495457 CEP162Q5TB80 1403 aa22.98■■□□□ 1.27
RPRD1B-206ENST00000495457 ZFYVE16Q7Z3T8 1539 aa22.95■■□□□ 1.26
RPRD1B-206ENST00000495457 LOC105371045A0A1W2PR82 267 aa22.94■■□□□ 1.26
RPRD1B-206ENST00000495457 MAGI2Q86UL8 1455 aa22.93■■□□□ 1.26
RPRD1B-206ENST00000495457 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
RPRD1B-206ENST00000495457 AFAP1Q8N556 730 aa22.91■■□□□ 1.26
RPRD1B-206ENST00000495457 CDC42BPBQ9Y5S2 1711 aa22.91■■□□□ 1.26
RPRD1B-206ENST00000495457 BCORL1Q5H9F3 1711 aa22.9■■□□□ 1.26
RPRD1B-206ENST00000495457 PREX2Q70Z35 1606 aa22.9■■□□□ 1.26
RPRD1B-206ENST00000495457 PTPRMP28827 1452 aa22.88■■□□□ 1.25
RPRD1B-206ENST00000495457 SIGLEC1Q9BZZ2 1709 aa22.88■■□□□ 1.25
RPRD1B-206ENST00000495457 ZNF518AQ6AHZ1 1483 aa22.87■■□□□ 1.25
RPRD1B-206ENST00000495457 ARHGEF12Q9NZN5 1544 aa22.86■■□□□ 1.25
RPRD1B-206ENST00000495457 MADDQ8WXG6 1647 aa22.86■■□□□ 1.25
RPRD1B-206ENST00000495457 HECW2Q9P2P5 1572 aa22.85■■□□□ 1.25
RPRD1B-206ENST00000495457 ABCC1P33527 1531 aa22.84■■□□□ 1.25
RPRD1B-206ENST00000495457 GPATCH8Q9UKJ3 1502 aaKnown RBP22.84■■□□□ 1.25
RPRD1B-206ENST00000495457 MTUS2Q5JR59 1369 aa22.84■■□□□ 1.25
RPRD1B-206ENST00000495457 KDM5CP41229 1560 aa22.84■■□□□ 1.25
RPRD1B-206ENST00000495457 TRAPPC8Q9Y2L5 1435 aa22.83■■□□□ 1.25
RPRD1B-206ENST00000495457 CDC42BPAQ5VT25 1732 aa22.83■■□□□ 1.25
RPRD1B-206ENST00000495457 MLECQ14165 292 aa22.83■■□□□ 1.25
RPRD1B-206ENST00000495457 ATP10AO60312 1499 aa22.83■■□□□ 1.25
RPRD1B-206ENST00000495457 ZNF777Q9ULD5 760 aaPredicted RBP22.82■■□□□ 1.24
RPRD1B-206ENST00000495457 MYT1LQ9UL68 1186 aa22.81■■□□□ 1.24
RPRD1B-206ENST00000495457 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
RPRD1B-206ENST00000495457 CCNB3Q8WWL7 1395 aa22.77■■□□□ 1.24
RPRD1B-206ENST00000495457 SAMD9LQ8IVG5 1584 aa22.77■■□□□ 1.24
RPRD1B-206ENST00000495457 MLH3Q9UHC1 1453 aa22.77■■□□□ 1.24
RPRD1B-206ENST00000495457 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
RPRD1B-206ENST00000495457 CFDP1Q9UEE9 299 aaPredicted RBP22.76■■□□□ 1.23
RPRD1B-206ENST00000495457 RIMS1Q86UR5 1692 aaKnown RBP22.76■■□□□ 1.23
RPRD1B-206ENST00000495457 EHBP1L1Q8N3D4 1523 aa22.75■■□□□ 1.23
RPRD1B-206ENST00000495457 DIP2CQ9Y2E4 1556 aa22.75■■□□□ 1.23
RPRD1B-206ENST00000495457 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.233e-9■■■□□ 16.9
RPRD1B-206ENST00000495457 PLPPR3Q6T4P5 718 aa22.74■■□□□ 1.23
RPRD1B-206ENST00000495457 SYCP2Q9BX26 1530 aa22.73■■□□□ 1.23
RPRD1B-206ENST00000495457 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
RPRD1B-206ENST00000495457 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
RPRD1B-206ENST00000495457 TIAM1Q13009 1591 aa22.7■■□□□ 1.22
RPRD1B-206ENST00000495457 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
RPRD1B-206ENST00000495457 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
RPRD1B-206ENST00000495457 KIDINS220Q9ULH0 1771 aa22.67■■□□□ 1.22
RPRD1B-206ENST00000495457 REREQ9P2R6 1566 aa22.67■■□□□ 1.22
RPRD1B-206ENST00000495457 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
RPRD1B-206ENST00000495457 SPAG9O60271 1321 aaKnown RBP22.66■■□□□ 1.22
RPRD1B-206ENST00000495457 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
RPRD1B-206ENST00000495457 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
RPRD1B-206ENST00000495457 LMTK3Q96Q04 1460 aa22.64■■□□□ 1.21
RPRD1B-206ENST00000495457 AGLP35573 1532 aa22.62■■□□□ 1.21
RPRD1B-206ENST00000495457 CEBPAP49715 358 aaPredicted RBP22.61■■□□□ 1.21
RPRD1B-206ENST00000495457 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
RPRD1B-206ENST00000495457 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
RPRD1B-206ENST00000495457 ATP7AQ04656 1500 aa22.59■■□□□ 1.21
RPRD1B-206ENST00000495457 SUPT6HQ7KZ85 1726 aaKnown RBP22.59■■□□□ 1.21
RPRD1B-206ENST00000495457 KANK4Q5T7N3 995 aaPredicted RBP22.58■■□□□ 1.21
RPRD1B-206ENST00000495457 INO80Q9ULG1 1556 aaPredicted RBP22.57■■□□□ 1.2
RPRD1B-206ENST00000495457 HSPA2P54652 639 aa22.56■■□□□ 1.2
RPRD1B-206ENST00000495457 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
RPRD1B-206ENST00000495457 MAP3K1Q13233 1512 aa22.52■■□□□ 1.2
RPRD1B-206ENST00000495457 A2MP01023 1474 aa22.52■■□□□ 1.2
RPRD1B-206ENST00000495457 ESF1Q9H501 851 aaKnown RBP22.51■■□□□ 1.19
RPRD1B-206ENST00000495457 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
RPRD1B-206ENST00000495457 CCDC141Q6ZP82 1450 aa22.47■■□□□ 1.19
RPRD1B-206ENST00000495457 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
RPRD1B-206ENST00000495457 CNTLNQ9NXG0 1405 aa22.45■■□□□ 1.18
RPRD1B-206ENST00000495457 C3P01024 1663 aa22.44■■□□□ 1.18
RPRD1B-206ENST00000495457 RSPH4AQ5TD94 716 aa22.44■■□□□ 1.18
RPRD1B-206ENST00000495457 GGT6Q6P531 493 aa22.44■■□□□ 1.18
RPRD1B-206ENST00000495457 APLP2Q06481 763 aa22.42■■□□□ 1.18
RPRD1B-206ENST00000495457 ILDR1Q86SU0 546 aaPredicted RBP22.42■■□□□ 1.18
RPRD1B-206ENST00000495457 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
RPRD1B-206ENST00000495457 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
RPRD1B-206ENST00000495457 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
RPRD1B-206ENST00000495457 UHRF1BP1Q6BDS2 1440 aa22.4■■□□□ 1.18
RPRD1B-206ENST00000495457 ZMYM3Q14202 1370 aa22.4■■□□□ 1.18
RPRD1B-206ENST00000495457 DHX29Q7Z478 1369 aaKnown RBP22.4■■□□□ 1.18
RPRD1B-206ENST00000495457 ARHGEF5Q12774 1597 aa22.4■■□□□ 1.18
RPRD1B-206ENST00000495457 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
RPRD1B-206ENST00000495457 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
RPRD1B-206ENST00000495457 MIA2Q96PC5 1412 aa22.38■■□□□ 1.17
RPRD1B-206ENST00000495457 KIF3BO15066 747 aa22.35■■□□□ 1.17
RPRD1B-206ENST00000495457 CLTCQ00610 1675 aaKnown RBP22.35■■□□□ 1.17
RPRD1B-206ENST00000495457 MROH2AA6NES4 1674 aa22.34■■□□□ 1.17
RPRD1B-206ENST00000495457 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
RPRD1B-206ENST00000495457 NPATQ14207 1427 aa22.31■■□□□ 1.16
RPRD1B-206ENST00000495457 SETD1BQ9UPS6 1966 aaKnown RBP22.31■■□□□ 1.16
RPRD1B-206ENST00000495457 PTPRKQ15262 1439 aa22.29■■□□□ 1.16
RPRD1B-206ENST00000495457 MAST1Q9Y2H9 1570 aa22.29■■□□□ 1.16
RPRD1B-206ENST00000495457 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
RPRD1B-206ENST00000495457 ABCC5O15440 1437 aa22.24■■□□□ 1.15
RPRD1B-206ENST00000495457 FGD6Q6ZV73 1430 aa22.24■■□□□ 1.15
RPRD1B-206ENST00000495457 STRCQ7RTU9 1775 aa22.24■■□□□ 1.15
RPRD1B-206ENST00000495457 WASHC2CQ9Y4E1 1318 aa22.23■■□□□ 1.15
RPRD1B-206ENST00000495457 KDM5DQ9BY66 1539 aa22.22■■□□□ 1.15
RPRD1B-206ENST00000495457 FBXO31Q5XUX0 539 aaPredicted RBP22.21■■□□□ 1.15
RPRD1B-206ENST00000495457 TCOF1Q13428 1488 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms