RNA–Protein interactions for RNA: ENST00000495212.1

HDGF-209, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-209ENST00000495212 EFCAB2Q5VUJ9 269 aa32.42■■■□□ 2.78
HDGF-209ENST00000495212 ZMYM4Q5VZL5 1548 aa32.41■■■□□ 2.78
HDGF-209ENST00000495212 SIGLEC1Q9BZZ2 1709 aa32.4■■■□□ 2.78
HDGF-209ENST00000495212 POGZQ7Z3K3 1410 aa32.39■■■□□ 2.78
HDGF-209ENST00000495212 CCDC18Q5T9S5 1454 aa32.39■■■□□ 2.78
HDGF-209ENST00000495212 ARHGAP5Q13017 1502 aa32.38■■■□□ 2.77
HDGF-209ENST00000495212 ZFYVE16Q7Z3T8 1539 aa32.38■■■□□ 2.77
HDGF-209ENST00000495212 MADDQ8WXG6 1647 aa32.37■■■□□ 2.77
HDGF-209ENST00000495212 FYCO1Q9BQS8 1478 aa32.36■■■□□ 2.77
HDGF-209ENST00000495212 PTPRMP28827 1452 aa32.35■■■□□ 2.77
HDGF-209ENST00000495212 CDC42BPBQ9Y5S2 1711 aa32.35■■■□□ 2.77
HDGF-209ENST00000495212 MAGI2Q86UL8 1455 aa32.29■■■□□ 2.76
HDGF-209ENST00000495212 AFAP1Q8N556 730 aa32.29■■■□□ 2.76
HDGF-209ENST00000495212 RIMS1Q86UR5 1692 aaKnown RBP32.27■■■□□ 2.76
HDGF-209ENST00000495212 MLECQ14165 292 aa32.27■■■□□ 2.76
HDGF-209ENST00000495212 PREX2Q70Z35 1606 aa32.26■■■□□ 2.76
HDGF-209ENST00000495212 CDC42BPAQ5VT25 1732 aa32.23■■■□□ 2.75
HDGF-209ENST00000495212 PLPPR3Q6T4P5 718 aa32.23■■■□□ 2.75
HDGF-209ENST00000495212 ARHGEF12Q9NZN5 1544 aa32.21■■■□□ 2.75
HDGF-209ENST00000495212 ZNF518AQ6AHZ1 1483 aa32.2■■■□□ 2.75
HDGF-209ENST00000495212 CEP162Q5TB80 1403 aa32.19■■■□□ 2.74
HDGF-209ENST00000495212 ATP10AO60312 1499 aa32.19■■■□□ 2.74
HDGF-209ENST00000495212 MYT1LQ9UL68 1186 aa32.19■■■□□ 2.74
HDGF-209ENST00000495212 KDM5CP41229 1560 aa32.18■■■□□ 2.74
HDGF-209ENST00000495212 TRAPPC8Q9Y2L5 1435 aa32.17■■■□□ 2.74
HDGF-209ENST00000495212 C9orf84Q5VXU9 1444 aa32.16■■■□□ 2.74
HDGF-209ENST00000495212 ABCC1P33527 1531 aa32.16■■■□□ 2.74
HDGF-209ENST00000495212 LOC105371045A0A1W2PR82 267 aa32.15■■■□□ 2.74
HDGF-209ENST00000495212 ZNF777Q9ULD5 760 aaPredicted RBP32.15■■■□□ 2.74
HDGF-209ENST00000495212 ITSN2Q9NZM3 1697 aa32.15■■■□□ 2.74
HDGF-209ENST00000495212 GPATCH8Q9UKJ3 1502 aaKnown RBP32.1■■■□□ 2.73
HDGF-209ENST00000495212 FER1L4A9Z1Z3 1794 aa32.1■■■□□ 2.73
HDGF-209ENST00000495212 DIP2CQ9Y2E4 1556 aa32.1■■■□□ 2.73
HDGF-209ENST00000495212 ABCA6Q8N139 1617 aa32.08■■■□□ 2.73
HDGF-209ENST00000495212 SAMD9LQ8IVG5 1584 aa32.08■■■□□ 2.73
HDGF-209ENST00000495212 MTUS2Q5JR59 1369 aa32.07■■■□□ 2.73
HDGF-209ENST00000495212 MLH3Q9UHC1 1453 aa32.04■■■□□ 2.72
HDGF-209ENST00000495212 HNRNPMP52272 730 aaKnown RBP eCLIP32.03■■■□□ 2.72
HDGF-209ENST00000495212 LMTK3Q96Q04 1460 aa32.02■■■□□ 2.72
HDGF-209ENST00000495212 SYCP2Q9BX26 1530 aa32.01■■■□□ 2.72
HDGF-209ENST00000495212 CCNB3Q8WWL7 1395 aa32.01■■■□□ 2.71
HDGF-209ENST00000495212 KIDINS220Q9ULH0 1771 aa32.01■■■□□ 2.71
HDGF-209ENST00000495212 CFDP1Q9UEE9 299 aaPredicted RBP31.99■■■□□ 2.71
HDGF-209ENST00000495212 CEBPAP49715 358 aaPredicted RBP31.97■■■□□ 2.71
HDGF-209ENST00000495212 HSPA2P54652 639 aa31.95■■■□□ 2.71
HDGF-209ENST00000495212 EHBP1L1Q8N3D4 1523 aa31.95■■■□□ 2.7
HDGF-209ENST00000495212 TIAM1Q13009 1591 aa31.94■■■□□ 2.7
HDGF-209ENST00000495212 ILDR1Q86SU0 546 aaPredicted RBP31.94■■■□□ 2.7
HDGF-209ENST00000495212 REREQ9P2R6 1566 aa31.94■■■□□ 2.7
HDGF-209ENST00000495212 ZNF644Q9H582 1327 aaPredicted RBP31.93■■■□□ 2.7
HDGF-209ENST00000495212 SPAG9O60271 1321 aaKnown RBP31.89■■■□□ 2.7
HDGF-209ENST00000495212 AGLP35573 1532 aa31.85■■■□□ 2.69
HDGF-209ENST00000495212 KIAA1107Q9UPP5 1409 aa31.85■■■□□ 2.69
HDGF-209ENST00000495212 PLEKHH2Q8IVE3 1493 aa31.84■■■□□ 2.69
HDGF-209ENST00000495212 ATP7AQ04656 1500 aa31.82■■■□□ 2.68
HDGF-209ENST00000495212 VPS8Q8N3P4 1428 aa31.81■■■□□ 2.68
HDGF-209ENST00000495212 SUPT6HQ7KZ85 1726 aaKnown RBP31.8■■■□□ 2.68
HDGF-209ENST00000495212 NCOA2Q15596 1464 aa31.8■■■□□ 2.68
HDGF-209ENST00000495212 INO80Q9ULG1 1556 aaPredicted RBP31.79■■■□□ 2.68
HDGF-209ENST00000495212 C3P01024 1663 aa31.77■■■□□ 2.68
HDGF-209ENST00000495212 MBD5Q9P267 1494 aa31.76■■■□□ 2.67
HDGF-209ENST00000495212 PREX1Q8TCU6 1659 aa31.74■■■□□ 2.67
HDGF-209ENST00000495212 ESF1Q9H501 851 aaKnown RBP31.74■■■□□ 2.67
HDGF-209ENST00000495212 A2MP01023 1474 aa31.71■■■□□ 2.67
HDGF-209ENST00000495212 KANK4Q5T7N3 995 aaPredicted RBP31.69■■■□□ 2.66
HDGF-209ENST00000495212 LRRC9Q6ZRR7 1453 aa31.69■■■□□ 2.66
HDGF-209ENST00000495212 PLXNC1O60486 1568 aa31.68■■■□□ 2.66
HDGF-209ENST00000495212 CAMSAP2Q08AD1 1489 aa31.68■■■□□ 2.66
HDGF-209ENST00000495212 SETD1BQ9UPS6 1966 aaKnown RBP31.66■■■□□ 2.66
HDGF-209ENST00000495212 GGT6Q6P531 493 aa31.63■■■□□ 2.65
HDGF-209ENST00000495212 UHRF1BP1Q6BDS2 1440 aa31.63■■■□□ 2.65
HDGF-209ENST00000495212 ADGBQ8N7X0 1667 aa31.63■■■□□ 2.65
HDGF-209ENST00000495212 CLTCQ00610 1675 aaKnown RBP31.61■■■□□ 2.65
HDGF-209ENST00000495212 CNTLNQ9NXG0 1405 aa31.61■■■□□ 2.65
HDGF-209ENST00000495212 CCDC141Q6ZP82 1450 aa31.59■■■□□ 2.65
HDGF-209ENST00000495212 ZMYM3Q14202 1370 aa31.58■■■□□ 2.65
HDGF-209ENST00000495212 RTEL1-TNFRSF6BF6WH68 1400 aa31.58■■■□□ 2.65
HDGF-209ENST00000495212 MROH2AA6NES4 1674 aa31.57■■■□□ 2.64
HDGF-209ENST00000495212 STRCQ7RTU9 1775 aa31.56■■■□□ 2.64
HDGF-209ENST00000495212 MAP3K1Q13233 1512 aa31.54■■■□□ 2.64
HDGF-209ENST00000495212 DHX29Q7Z478 1369 aaKnown RBP31.52■■■□□ 2.64
HDGF-209ENST00000495212 ARHGEF5Q12774 1597 aa31.49■■■□□ 2.63
HDGF-209ENST00000495212 FBXO41Q8TF61 875 aa31.49■■■□□ 2.63
HDGF-209ENST00000495212 RSPH4AQ5TD94 716 aa31.48■■■□□ 2.63
HDGF-209ENST00000495212 KIF3BO15066 747 aa31.47■■■□□ 2.63
HDGF-209ENST00000495212 NPATQ14207 1427 aa31.44■■■□□ 2.62
HDGF-209ENST00000495212 MYOM3Q5VTT5 1437 aa31.44■■■□□ 2.62
HDGF-209ENST00000495212 TSPY4P0CV99 314 aa31.44■■■□□ 2.62
HDGF-209ENST00000495212 TSPY10P0CW01 314 aa31.44■■■□□ 2.62
HDGF-209ENST00000495212 PTPRKQ15262 1439 aa31.42■■■□□ 2.62
HDGF-209ENST00000495212 APLP2Q06481 763 aa31.39■■■□□ 2.62
HDGF-209ENST00000495212 PPP6R1Q9UPN7 881 aa31.38■■■□□ 2.61
HDGF-209ENST00000495212 CERKQ8TCT0 537 aa31.37■■■□□ 2.61
HDGF-209ENST00000495212 MIA2Q96PC5 1412 aa31.37■■■□□ 2.61
HDGF-209ENST00000495212 MYO3AQ8NEV4 1616 aa31.36■■■□□ 2.61
HDGF-209ENST00000495212 CAMSAP1Q5T5Y3 1602 aa31.35■■■□□ 2.61
HDGF-209ENST00000495212 DMRT2Q9Y5R5 561 aa31.35■■■□□ 2.61
HDGF-209ENST00000495212 NCOA1Q15788 1441 aa31.34■■■□□ 2.61
HDGF-209ENST00000495212 MAST1Q9Y2H9 1570 aa31.34■■■□□ 2.61
HDGF-209ENST00000495212 FBXO31Q5XUX0 539 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms