RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SIGLEC1Q9BZZ2 1709 aa36.34■■■■□ 3.41
HDDC3-203ENST00000494993 ILDR1Q86SU0 546 aaPredicted RBP36.33■■■■□ 3.41
HDDC3-203ENST00000494993 SCAPERQ9BY12 1400 aa36.33■■■■□ 3.41
HDDC3-203ENST00000494993 POGZQ7Z3K3 1410 aa36.32■■■■□ 3.4
HDDC3-203ENST00000494993 YEATS2Q9ULM3 1422 aa36.32■■■■□ 3.4
HDDC3-203ENST00000494993 TROQ12816 1431 aaPredicted RBP36.3■■■■□ 3.4
HDDC3-203ENST00000494993 EFCAB2Q5VUJ9 269 aa36.25■■■■□ 3.39
HDDC3-203ENST00000494993 CLIP1P30622 1438 aa36.25■■■■□ 3.39
HDDC3-203ENST00000494993 PCF11O94913 1555 aaKnown RBP36.23■■■■□ 3.39
HDDC3-203ENST00000494993 ARHGAP5Q13017 1502 aa36.19■■■■□ 3.38
HDDC3-203ENST00000494993 FER1L4A9Z1Z3 1794 aa36.18■■■■□ 3.38
HDDC3-203ENST00000494993 CDC42BPBQ9Y5S2 1711 aa36.18■■■■□ 3.38
HDDC3-203ENST00000494993 CASKIN1Q8WXD9 1431 aa36.17■■■■□ 3.38
HDDC3-203ENST00000494993 CCDC18Q5T9S5 1454 aa36.16■■■■□ 3.38
HDDC3-203ENST00000494993 LMTK3Q96Q04 1460 aa36.14■■■■□ 3.38
HDDC3-203ENST00000494993 ATP10AO60312 1499 aa36.13■■■■□ 3.37
HDDC3-203ENST00000494993 ZNF518AQ6AHZ1 1483 aa36.13■■■■□ 3.37
HDDC3-203ENST00000494993 KDM5CP41229 1560 aa36.11■■■■□ 3.37
HDDC3-203ENST00000494993 PREX2Q70Z35 1606 aa36.11■■■■□ 3.37
HDDC3-203ENST00000494993 C9orf84Q5VXU9 1444 aa36.1■■■■□ 3.37
HDDC3-203ENST00000494993 MLECQ14165 292 aa36.07■■■■□ 3.36
HDDC3-203ENST00000494993 FYCO1Q9BQS8 1478 aa36.05■■■■□ 3.36
HDDC3-203ENST00000494993 ARHGEF12Q9NZN5 1544 aa36.04■■■■□ 3.36
HDDC3-203ENST00000494993 CDC42BPAQ5VT25 1732 aa36.03■■■■□ 3.36
HDDC3-203ENST00000494993 PLPPR3Q6T4P5 718 aa36.01■■■■□ 3.36
HDDC3-203ENST00000494993 AFAP1Q8N556 730 aa36.01■■■■□ 3.36
HDDC3-203ENST00000494993 ITSN2Q9NZM3 1697 aa36■■■■□ 3.35
HDDC3-203ENST00000494993 ABCC1P33527 1531 aa35.99■■■■□ 3.35
HDDC3-203ENST00000494993 DIP2CQ9Y2E4 1556 aa35.99■■■■□ 3.35
HDDC3-203ENST00000494993 ABCA6Q8N139 1617 aa35.95■■■■□ 3.35
HDDC3-203ENST00000494993 REREQ9P2R6 1566 aa35.94■■■■□ 3.34
HDDC3-203ENST00000494993 MLH3Q9UHC1 1453 aa35.93■■■■□ 3.34
HDDC3-203ENST00000494993 MYT1LQ9UL68 1186 aa35.92■■■■□ 3.34
HDDC3-203ENST00000494993 TRAPPC8Q9Y2L5 1435 aa35.9■■■■□ 3.34
HDDC3-203ENST00000494993 HSPA2P54652 639 aa35.88■■■■□ 3.33
HDDC3-203ENST00000494993 PREX1Q8TCU6 1659 aa35.87■■■■□ 3.33
HDDC3-203ENST00000494993 KIDINS220Q9ULH0 1771 aa35.85■■■■□ 3.33
HDDC3-203ENST00000494993 SAMD9LQ8IVG5 1584 aa35.81■■■■□ 3.32
HDDC3-203ENST00000494993 AGLP35573 1532 aa35.8■■■■□ 3.32
HDDC3-203ENST00000494993 FBXO41Q8TF61 875 aa35.8■■■■□ 3.32
HDDC3-203ENST00000494993 GPATCH8Q9UKJ3 1502 aaKnown RBP35.78■■■■□ 3.32
HDDC3-203ENST00000494993 SETD1BQ9UPS6 1966 aaKnown RBP35.78■■■■□ 3.32
HDDC3-203ENST00000494993 CEBPAP49715 358 aaPredicted RBP35.77■■■■□ 3.32
HDDC3-203ENST00000494993 SYCP2Q9BX26 1530 aa35.75■■■■□ 3.31
HDDC3-203ENST00000494993 C3P01024 1663 aa35.73■■■■□ 3.31
HDDC3-203ENST00000494993 ZNF777Q9ULD5 760 aaPredicted RBP35.73■■■■□ 3.31
HDDC3-203ENST00000494993 MTUS2Q5JR59 1369 aa35.66■■■■□ 3.3
HDDC3-203ENST00000494993 CCNB3Q8WWL7 1395 aa35.64■■■■□ 3.3
HDDC3-203ENST00000494993 PLEKHH2Q8IVE3 1493 aa35.64■■■■□ 3.3
HDDC3-203ENST00000494993 UHRF1BP1Q6BDS2 1440 aa35.63■■■■□ 3.29
HDDC3-203ENST00000494993 KIAA1107Q9UPP5 1409 aa35.63■■■■□ 3.29
HDDC3-203ENST00000494993 HNRNPMP52272 730 aaKnown RBP eCLIP35.62■■■■□ 3.29
HDDC3-203ENST00000494993 CFDP1Q9UEE9 299 aaPredicted RBP35.62■■■■□ 3.29
HDDC3-203ENST00000494993 STRCQ7RTU9 1775 aa35.61■■■■□ 3.29
HDDC3-203ENST00000494993 SUPT6HQ7KZ85 1726 aaKnown RBP35.61■■■■□ 3.29
HDDC3-203ENST00000494993 ATP7AQ04656 1500 aa35.61■■■■□ 3.29
HDDC3-203ENST00000494993 SPAG9O60271 1321 aaKnown RBP35.6■■■■□ 3.29
HDDC3-203ENST00000494993 INO80Q9ULG1 1556 aaPredicted RBP35.6■■■■□ 3.29
HDDC3-203ENST00000494993 ESF1Q9H501 851 aaKnown RBP35.6■■■■□ 3.29
HDDC3-203ENST00000494993 EHBP1L1Q8N3D4 1523 aa35.59■■■■□ 3.29
HDDC3-203ENST00000494993 TIAM1Q13009 1591 aa35.59■■■■□ 3.29
HDDC3-203ENST00000494993 CEP162Q5TB80 1403 aa35.57■■■■□ 3.29
HDDC3-203ENST00000494993 CNTLNQ9NXG0 1405 aa35.57■■■■□ 3.29
HDDC3-203ENST00000494993 MROH2AA6NES4 1674 aa35.56■■■■□ 3.28
HDDC3-203ENST00000494993 PLXNC1O60486 1568 aa35.53■■■■□ 3.28
HDDC3-203ENST00000494993 ADGBQ8N7X0 1667 aa35.48■■■■□ 3.27
HDDC3-203ENST00000494993 A2MP01023 1474 aa35.48■■■■□ 3.27
HDDC3-203ENST00000494993 CERKQ8TCT0 537 aa35.46■■■■□ 3.27
HDDC3-203ENST00000494993 CLTCQ00610 1675 aaKnown RBP35.45■■■■□ 3.27
HDDC3-203ENST00000494993 DMRT2Q9Y5R5 561 aa35.44■■■■□ 3.26
HDDC3-203ENST00000494993 ZNF644Q9H582 1327 aaPredicted RBP35.42■■■■□ 3.26
HDDC3-203ENST00000494993 MBD5Q9P267 1494 aa35.41■■■■□ 3.26
HDDC3-203ENST00000494993 NPATQ14207 1427 aa35.4■■■■□ 3.26
HDDC3-203ENST00000494993 ZMYM3Q14202 1370 aa35.38■■■■□ 3.25
HDDC3-203ENST00000494993 PTPRTO14522 1441 aa35.34■■■■□ 3.25
HDDC3-203ENST00000494993 NCOA2Q15596 1464 aa35.34■■■■□ 3.25
HDDC3-203ENST00000494993 RTEL1-TNFRSF6BF6WH68 1400 aa35.32■■■■□ 3.25
HDDC3-203ENST00000494993 NCOA1Q15788 1441 aa35.3■■■■□ 3.24
HDDC3-203ENST00000494993 GGT6Q6P531 493 aa35.29■■■■□ 3.24
HDDC3-203ENST00000494993 CAMSAP2Q08AD1 1489 aa35.29■■■■□ 3.24
HDDC3-203ENST00000494993 MYO3AQ8NEV4 1616 aa35.28■■■■□ 3.24
HDDC3-203ENST00000494993 ZNF142P52746 1687 aaPredicted RBP35.27■■■■□ 3.24
HDDC3-203ENST00000494993 CAMSAP1Q5T5Y3 1602 aa35.27■■■■□ 3.24
HDDC3-203ENST00000494993 CCDC141Q6ZP82 1450 aa35.26■■■■□ 3.23
HDDC3-203ENST00000494993 PTPRKQ15262 1439 aa35.23■■■■□ 3.23
HDDC3-203ENST00000494993 PPP6R1Q9UPN7 881 aa35.23■■■■□ 3.23
HDDC3-203ENST00000494993 VPS8Q8N3P4 1428 aa35.23■■■■□ 3.23
HDDC3-203ENST00000494993 DHX29Q7Z478 1369 aaKnown RBP35.22■■■■□ 3.23
HDDC3-203ENST00000494993 CEP170BQ9Y4F5 1589 aaPredicted RBP35.18■■■■□ 3.22
HDDC3-203ENST00000494993 ARHGEF5Q12774 1597 aa35.17■■■■□ 3.22
HDDC3-203ENST00000494993 LOC105371045A0A1W2PR82 267 aa35.17■■■■□ 3.22
HDDC3-203ENST00000494993 LRRC9Q6ZRR7 1453 aa35.16■■■■□ 3.22
HDDC3-203ENST00000494993 RSPH4AQ5TD94 716 aa35.16■■■■□ 3.22
HDDC3-203ENST00000494993 LTBP4Q8N2S1 1624 aa35.15■■■■□ 3.22
HDDC3-203ENST00000494993 PLA2R1Q13018 1463 aa35.11■■■■□ 3.21
HDDC3-203ENST00000494993 FAM135AQ9P2D6 1515 aa35.1■■■■□ 3.21
HDDC3-203ENST00000494993 KIF3BO15066 747 aa35.09■■■■□ 3.21
HDDC3-203ENST00000494993 MAP3K1Q13233 1512 aa35.07■■■■□ 3.21
HDDC3-203ENST00000494993 KDM5DQ9BY66 1539 aa35.07■■■■□ 3.21
HDDC3-203ENST00000494993 NCKAP5LQ9HCH0 1330 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms