RNA–Protein interactions for RNA: ENST00000494683.1

DENND4B-212, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-212ENST00000494683 CDC42BPAQ5VT25 1732 aa22.25■■□□□ 1.15
DENND4B-212ENST00000494683 ARHGEF40Q8TER5 1519 aa22.25■■□□□ 1.15
DENND4B-212ENST00000494683 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
DENND4B-212ENST00000494683 POGZQ7Z3K3 1410 aa22.21■■□□□ 1.15
DENND4B-212ENST00000494683 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
DENND4B-212ENST00000494683 SCAPERQ9BY12 1400 aa22.18■■□□□ 1.14
DENND4B-212ENST00000494683 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
DENND4B-212ENST00000494683 ABCC1P33527 1531 aa22.16■■□□□ 1.14
DENND4B-212ENST00000494683 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
DENND4B-212ENST00000494683 VPS8Q8N3P4 1428 aa22.15■■□□□ 1.14
DENND4B-212ENST00000494683 ITSN2Q9NZM3 1697 aa22.15■■□□□ 1.14
DENND4B-212ENST00000494683 KDM5CP41229 1560 aa22.14■■□□□ 1.13
DENND4B-212ENST00000494683 MAGI2Q86UL8 1455 aa22.13■■□□□ 1.13
DENND4B-212ENST00000494683 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
DENND4B-212ENST00000494683 MTUS2Q5JR59 1369 aa22.12■■□□□ 1.13
DENND4B-212ENST00000494683 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
DENND4B-212ENST00000494683 GPATCH8Q9UKJ3 1502 aaKnown RBP22.11■■□□□ 1.13
DENND4B-212ENST00000494683 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
DENND4B-212ENST00000494683 YEATS2Q9ULM3 1422 aa22.11■■□□□ 1.13
DENND4B-212ENST00000494683 SAMD9LQ8IVG5 1584 aa22.11■■□□□ 1.13
DENND4B-212ENST00000494683 BCORL1Q5H9F3 1711 aa22.1■■□□□ 1.13
DENND4B-212ENST00000494683 ADAMTSL3P82987 1691 aa22.1■■□□□ 1.13
DENND4B-212ENST00000494683 ARHGEF12Q9NZN5 1544 aa22.09■■□□□ 1.13
DENND4B-212ENST00000494683 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.13
DENND4B-212ENST00000494683 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
DENND4B-212ENST00000494683 SYCP2Q9BX26 1530 aa22.04■■□□□ 1.12
DENND4B-212ENST00000494683 CCNB3Q8WWL7 1395 aa22.03■■□□□ 1.12
DENND4B-212ENST00000494683 TRAPPC8Q9Y2L5 1435 aa22.03■■□□□ 1.12
DENND4B-212ENST00000494683 DIP2CQ9Y2E4 1556 aa22.03■■□□□ 1.12
DENND4B-212ENST00000494683 ABCA6Q8N139 1617 aa22.02■■□□□ 1.12
DENND4B-212ENST00000494683 MADDQ8WXG6 1647 aa22.02■■□□□ 1.12
DENND4B-212ENST00000494683 MAP3K1Q13233 1512 aa22.01■■□□□ 1.11
DENND4B-212ENST00000494683 NCOA2Q15596 1464 aa22■■□□□ 1.11
DENND4B-212ENST00000494683 MLH3Q9UHC1 1453 aa22■■□□□ 1.11
DENND4B-212ENST00000494683 C9orf84Q5VXU9 1444 aa21.99■■□□□ 1.11
DENND4B-212ENST00000494683 ATP10AO60312 1499 aa21.99■■□□□ 1.11
DENND4B-212ENST00000494683 AFAP1Q8N556 730 aa21.99■■□□□ 1.11
DENND4B-212ENST00000494683 KIDINS220Q9ULH0 1771 aa21.99■■□□□ 1.11
DENND4B-212ENST00000494683 LRRC9Q6ZRR7 1453 aa21.98■■□□□ 1.11
DENND4B-212ENST00000494683 REREQ9P2R6 1566 aa21.98■■□□□ 1.11
DENND4B-212ENST00000494683 PLEKHH2Q8IVE3 1493 aa21.96■■□□□ 1.11
DENND4B-212ENST00000494683 ARID4BQ4LE39 1312 aaPredicted RBP21.96■■□□□ 1.11
DENND4B-212ENST00000494683 RIMS1Q86UR5 1692 aaKnown RBP21.95■■□□□ 1.1
DENND4B-212ENST00000494683 KIAA1107Q9UPP5 1409 aa21.95■■□□□ 1.1
DENND4B-212ENST00000494683 CFDP1Q9UEE9 299 aaPredicted RBP21.94■■□□□ 1.1
DENND4B-212ENST00000494683 ZNF777Q9ULD5 760 aaPredicted RBP21.94■■□□□ 1.1
DENND4B-212ENST00000494683 PTPRMP28827 1452 aa21.94■■□□□ 1.1
DENND4B-212ENST00000494683 INO80Q9ULG1 1556 aaPredicted RBP21.94■■□□□ 1.1
DENND4B-212ENST00000494683 FER1L4A9Z1Z3 1794 aa21.93■■□□□ 1.1
DENND4B-212ENST00000494683 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
DENND4B-212ENST00000494683 CAMSAP2Q08AD1 1489 aa21.88■■□□□ 1.09
DENND4B-212ENST00000494683 MBD5Q9P267 1494 aa21.88■■□□□ 1.09
DENND4B-212ENST00000494683 HNRNPMP52272 730 aaKnown RBP eCLIP21.87■■□□□ 1.09
DENND4B-212ENST00000494683 AGLP35573 1532 aa21.86■■□□□ 1.09
DENND4B-212ENST00000494683 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
DENND4B-212ENST00000494683 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
DENND4B-212ENST00000494683 MYT1LQ9UL68 1186 aa21.84■■□□□ 1.09
DENND4B-212ENST00000494683 PLXNC1O60486 1568 aa21.83■■□□□ 1.09
DENND4B-212ENST00000494683 SPAG9O60271 1321 aaKnown RBP21.82■■□□□ 1.08
DENND4B-212ENST00000494683 ARHGEF5Q12774 1597 aa21.81■■□□□ 1.08
DENND4B-212ENST00000494683 ADGBQ8N7X0 1667 aa21.81■■□□□ 1.08
DENND4B-212ENST00000494683 CCDC141Q6ZP82 1450 aa21.8■■□□□ 1.08
DENND4B-212ENST00000494683 MLECQ14165 292 aa21.8■■□□□ 1.08
DENND4B-212ENST00000494683 MYOM3Q5VTT5 1437 aa21.79■■□□□ 1.08
DENND4B-212ENST00000494683 RTEL1-TNFRSF6BF6WH68 1400 aa21.75■■□□□ 1.07
DENND4B-212ENST00000494683 MIA2Q96PC5 1412 aa21.75■■□□□ 1.07
DENND4B-212ENST00000494683 A2MP01023 1474 aa21.75■■□□□ 1.07
DENND4B-212ENST00000494683 APLP2Q06481 763 aa21.73■■□□□ 1.07
DENND4B-212ENST00000494683 MAST1Q9Y2H9 1570 aa21.71■■□□□ 1.07
DENND4B-212ENST00000494683 C3P01024 1663 aa21.71■■□□□ 1.07
DENND4B-212ENST00000494683 LMTK3Q96Q04 1460 aa21.71■■□□□ 1.07
DENND4B-212ENST00000494683 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
DENND4B-212ENST00000494683 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
DENND4B-212ENST00000494683 CROCC2H7BZ55 1655 aa21.69■■□□□ 1.06
DENND4B-212ENST00000494683 RSPH4AQ5TD94 716 aa21.67■■□□□ 1.06
DENND4B-212ENST00000494683 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
DENND4B-212ENST00000494683 TCOF1Q13428 1488 aaKnown RBP21.64■■□□□ 1.06
DENND4B-212ENST00000494683 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.06
DENND4B-212ENST00000494683 CLTCQ00610 1675 aaKnown RBP21.64■■□□□ 1.05
DENND4B-212ENST00000494683 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
DENND4B-212ENST00000494683 CNTLNQ9NXG0 1405 aa21.63■■□□□ 1.05
DENND4B-212ENST00000494683 DHX29Q7Z478 1369 aaKnown RBP21.62■■□□□ 1.05
DENND4B-212ENST00000494683 DNMT1P26358 1616 aaKnown RBP21.62■■□□□ 1.05
DENND4B-212ENST00000494683 SHANK2Q9UPX8 1470 aa21.6■■□□□ 1.05
DENND4B-212ENST00000494683 CEBPAP49715 358 aaPredicted RBP21.6■■□□□ 1.05
DENND4B-212ENST00000494683 TSPY4P0CV99 314 aa21.57■■□□□ 1.04
DENND4B-212ENST00000494683 TSPY10P0CW01 314 aa21.57■■□□□ 1.04
DENND4B-212ENST00000494683 EIF2AK4Q9P2K8 1649 aaKnown RBP21.57■■□□□ 1.04
DENND4B-212ENST00000494683 ABCC5O15440 1437 aa21.55■■□□□ 1.04
DENND4B-212ENST00000494683 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
DENND4B-212ENST00000494683 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
DENND4B-212ENST00000494683 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
DENND4B-212ENST00000494683 DAPK1P53355 1430 aa21.55■■□□□ 1.04
DENND4B-212ENST00000494683 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
DENND4B-212ENST00000494683 KDM5DQ9BY66 1539 aa21.52■■□□□ 1.04
DENND4B-212ENST00000494683 GGT6Q6P531 493 aa21.52■■□□□ 1.04
DENND4B-212ENST00000494683 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
DENND4B-212ENST00000494683 UHRF1BP1Q6BDS2 1440 aa21.51■■□□□ 1.03
DENND4B-212ENST00000494683 ZMYM3Q14202 1370 aa21.5■■□□□ 1.03
DENND4B-212ENST00000494683 NPATQ14207 1427 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms