RNA–Protein interactions for RNA: ENST00000494539.5

CLHC1-213, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 596 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-213ENST00000494539 MS4A4AQ96JQ5 239 aa8.99□□□□□ -0.97
CLHC1-213ENST00000494539 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
CLHC1-213ENST00000494539 MICALL2Q8IY33 904 aa8.93□□□□□ -0.98
CLHC1-213ENST00000494539 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
CLHC1-213ENST00000494539 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
CLHC1-213ENST00000494539 BBXQ8WY36 941 aaPredicted RBP8.9□□□□□ -0.98
CLHC1-213ENST00000494539 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.98
CLHC1-213ENST00000494539 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.87□□□□□ -0.99
CLHC1-213ENST00000494539 GTPBP6O43824 516 aaPredicted RBP8.85□□□□□ -0.99
CLHC1-213ENST00000494539 PPP1R37O75864 691 aa8.84□□□□□ -0.99
CLHC1-213ENST00000494539 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
CLHC1-213ENST00000494539 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
CLHC1-213ENST00000494539 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
CLHC1-213ENST00000494539 POTEB3A0JP26 581 aa8.82□□□□□ -1
CLHC1-213ENST00000494539 POTEBQ6S5H4 581 aa8.82□□□□□ -1
CLHC1-213ENST00000494539 DOK7Q18PE1 504 aa8.78□□□□□ -1
CLHC1-213ENST00000494539 TMEM92Q6UXU6 159 aa8.78□□□□□ -1
CLHC1-213ENST00000494539 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
CLHC1-213ENST00000494539 TMC2Q8TDI7 906 aa8.78□□□□□ -1
CLHC1-213ENST00000494539 ERBB3P21860 1342 aa8.77□□□□□ -1.01
CLHC1-213ENST00000494539 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
CLHC1-213ENST00000494539 HOXB3P14651 431 aaPredicted RBP8.76□□□□□ -1.01
CLHC1-213ENST00000494539 HOXB1P14653 301 aaPredicted RBP8.75□□□□□ -1.01
CLHC1-213ENST00000494539 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
CLHC1-213ENST00000494539 KIF3CO14782 793 aa8.74□□□□□ -1.01
CLHC1-213ENST00000494539 PAXIP1Q6ZW49 1069 aaPredicted RBP8.73□□□□□ -1.01
CLHC1-213ENST00000494539 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
CLHC1-213ENST00000494539 GPHNQ9NQX3 736 aaPredicted RBP8.7□□□□□ -1.02
CLHC1-213ENST00000494539 VARS2Q5ST30 1063 aaKnown RBP8.69□□□□□ -1.02
CLHC1-213ENST00000494539 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
CLHC1-213ENST00000494539 CRISPLD2Q9H0B8 497 aa8.69□□□□□ -1.02
CLHC1-213ENST00000494539 PDE4AP27815 886 aa8.68□□□□□ -1.02
CLHC1-213ENST00000494539 FOXK1P85037 733 aa8.68□□□□□ -1.02
CLHC1-213ENST00000494539 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
CLHC1-213ENST00000494539 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
CLHC1-213ENST00000494539 SLC34A2O95436 690 aa8.64□□□□□ -1.03
CLHC1-213ENST00000494539 DSG2Q14126 1118 aa8.64□□□□□ -1.03
CLHC1-213ENST00000494539 PLPP6Q8IY26 295 aa8.64□□□□□ -1.03
CLHC1-213ENST00000494539 MYT1LQ9UL68 1186 aa8.64□□□□□ -1.03
CLHC1-213ENST00000494539 PPP1R15BQ5SWA1 713 aa8.63□□□□□ -1.03
CLHC1-213ENST00000494539 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
CLHC1-213ENST00000494539 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
CLHC1-213ENST00000494539 LARP6Q9BRS8 491 aaKnown RBP8.62□□□□□ -1.03
CLHC1-213ENST00000494539 MFSD10Q14728 455 aa8.61□□□□□ -1.03
CLHC1-213ENST00000494539 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
CLHC1-213ENST00000494539 PTGER2P43116 358 aa8.58□□□□□ -1.04
CLHC1-213ENST00000494539 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
CLHC1-213ENST00000494539 GPR153Q6NV75 609 aa8.58□□□□□ -1.04
CLHC1-213ENST00000494539 TBC1D12O60347 775 aa8.57□□□□□ -1.04
CLHC1-213ENST00000494539 PTCD2Q8WV60 388 aaKnown RBP8.57□□□□□ -1.04
CLHC1-213ENST00000494539 PCDHGA4Q9Y5G9 962 aa8.57□□□□□ -1.04
CLHC1-213ENST00000494539 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
CLHC1-213ENST00000494539 ANKRD13DQ6ZTN6 518 aa8.55□□□□□ -1.04
CLHC1-213ENST00000494539 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
CLHC1-213ENST00000494539 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
CLHC1-213ENST00000494539 ZNF316A6NFI3 1004 aaPredicted RBP8.52□□□□□ -1.05
CLHC1-213ENST00000494539 UPF1Q92900 1129 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLHC1-213ENST00000494539 TSHZ2Q9NRE2 1034 aa8.52□□□□□ -1.05
CLHC1-213ENST00000494539 NUDT7P0C024 238 aa8.51□□□□□ -1.05
CLHC1-213ENST00000494539 KHSRPQ92945 711 aaKnown RBP eCLIP8.51□□□□□ -1.051e-6■■□□□ 13.8
CLHC1-213ENST00000494539 CAMK2BQ13554 666 aa8.5□□□□□ -1.05
CLHC1-213ENST00000494539 PSDA5PKW4 1024 aaPredicted RBP8.48□□□□□ -1.05
CLHC1-213ENST00000494539 MAP3K9P80192 1104 aa8.47□□□□□ -1.05
CLHC1-213ENST00000494539 LSM11P83369 360 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLHC1-213ENST00000494539 E2F4Q16254 413 aa8.46□□□□□ -1.06
CLHC1-213ENST00000494539 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
CLHC1-213ENST00000494539 KDM4FA0A1W2PPD8 638 aa8.45□□□□□ -1.06
CLHC1-213ENST00000494539 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
CLHC1-213ENST00000494539 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
CLHC1-213ENST00000494539 EVI5O60447 810 aa8.43□□□□□ -1.06
CLHC1-213ENST00000494539 PBX2P40425 430 aa8.43□□□□□ -1.06
CLHC1-213ENST00000494539 DPYSL4O14531 572 aa8.41□□□□□ -1.06
CLHC1-213ENST00000494539 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
CLHC1-213ENST00000494539 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
CLHC1-213ENST00000494539 ARIH1Q9Y4X5 557 aaPredicted RBP8.4□□□□□ -1.06
CLHC1-213ENST00000494539 P3H3Q8IVL6 736 aa8.39□□□□□ -1.07
CLHC1-213ENST00000494539 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
CLHC1-213ENST00000494539 JPH4Q96JJ6 628 aa8.38□□□□□ -1.07
CLHC1-213ENST00000494539 PDIA6Q15084 440 aa8.37□□□□□ -1.07
CLHC1-213ENST00000494539 ZNF454Q8N9F8 522 aa8.37□□□□□ -1.07
CLHC1-213ENST00000494539 PLA2G2EQ9NZK7 142 aa8.37□□□□□ -1.07
CLHC1-213ENST00000494539 AXIN2Q9Y2T1 843 aa8.37□□□□□ -1.07
CLHC1-213ENST00000494539 FOSBP53539 338 aa8.36□□□□□ -1.07
CLHC1-213ENST00000494539 KCNH8Q96L42 1107 aa8.36□□□□□ -1.07
CLHC1-213ENST00000494539 HCSTQ9UBK5 93 aa8.36□□□□□ -1.07
CLHC1-213ENST00000494539 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
CLHC1-213ENST00000494539 VSIG10Q8N0Z9 540 aa8.33□□□□□ -1.08
CLHC1-213ENST00000494539 KCNV2Q8TDN2 545 aa8.33□□□□□ -1.08
CLHC1-213ENST00000494539 PHF14O94880 888 aa8.32□□□□□ -1.08
CLHC1-213ENST00000494539 FBXW7Q969H0 707 aa8.32□□□□□ -1.08
CLHC1-213ENST00000494539 ZDHHC16Q969W1 377 aa8.32□□□□□ -1.08
CLHC1-213ENST00000494539 EPAS1Q99814 870 aa8.32□□□□□ -1.08
CLHC1-213ENST00000494539 BCL2L12Q9HB09 334 aa8.32□□□□□ -1.08
CLHC1-213ENST00000494539 ARHGAP33O14559 1287 aa8.31□□□□□ -1.08
CLHC1-213ENST00000494539 TYW1BQ6NUM6 668 aa8.31□□□□□ -1.08
CLHC1-213ENST00000494539 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
CLHC1-213ENST00000494539 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
CLHC1-213ENST00000494539 PCDHGA10Q9Y5H3 936 aa8.29□□□□□ -1.08
CLHC1-213ENST00000494539 PTPREP23469 700 aa8.28□□□□□ -1.08
CLHC1-213ENST00000494539 DDX12PQ92771 950 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms