RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 EFCAB2Q5VUJ9 269 aa23.19■■□□□ 1.3
PMP22-206ENST00000494511 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
PMP22-206ENST00000494511 ARHGAP5Q13017 1502 aa23.17■■□□□ 1.3
PMP22-206ENST00000494511 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
PMP22-206ENST00000494511 PTPRMP28827 1452 aa23.14■■□□□ 1.29
PMP22-206ENST00000494511 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
PMP22-206ENST00000494511 CDC42BPBQ9Y5S2 1711 aa23.12■■□□□ 1.29
PMP22-206ENST00000494511 POGZQ7Z3K3 1410 aa23.11■■□□□ 1.29
PMP22-206ENST00000494511 ARHGEF40Q8TER5 1519 aa23.11■■□□□ 1.29
PMP22-206ENST00000494511 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
PMP22-206ENST00000494511 MADDQ8WXG6 1647 aa23.09■■□□□ 1.29
PMP22-206ENST00000494511 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.29
PMP22-206ENST00000494511 PREX2Q70Z35 1606 aa23.08■■□□□ 1.29
PMP22-206ENST00000494511 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.28
PMP22-206ENST00000494511 CDC42BPAQ5VT25 1732 aa23.07■■□□□ 1.28
PMP22-206ENST00000494511 MTUS2Q5JR59 1369 aa23.05■■□□□ 1.28
PMP22-206ENST00000494511 AFAP1Q8N556 730 aa23.04■■□□□ 1.28
PMP22-206ENST00000494511 MAGI2Q86UL8 1455 aa23.04■■□□□ 1.28
PMP22-206ENST00000494511 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
PMP22-206ENST00000494511 RIMS1Q86UR5 1692 aaKnown RBP23.01■■□□□ 1.27
PMP22-206ENST00000494511 ZNF518AQ6AHZ1 1483 aa23.01■■□□□ 1.27
PMP22-206ENST00000494511 MYT1LQ9UL68 1186 aa23.01■■□□□ 1.27
PMP22-206ENST00000494511 SIGLEC1Q9BZZ2 1709 aa22.99■■□□□ 1.27
PMP22-206ENST00000494511 GPATCH8Q9UKJ3 1502 aaKnown RBP22.99■■□□□ 1.27
PMP22-206ENST00000494511 FBXO41Q8TF61 875 aa22.99■■□□□ 1.27
PMP22-206ENST00000494511 ABCC1P33527 1531 aa22.98■■□□□ 1.27
PMP22-206ENST00000494511 ARHGEF12Q9NZN5 1544 aa22.98■■□□□ 1.27
PMP22-206ENST00000494511 CCNB3Q8WWL7 1395 aa22.98■■□□□ 1.27
PMP22-206ENST00000494511 TRAPPC8Q9Y2L5 1435 aa22.97■■□□□ 1.27
PMP22-206ENST00000494511 LMTK3Q96Q04 1460 aa22.97■■□□□ 1.27
PMP22-206ENST00000494511 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
PMP22-206ENST00000494511 MLECQ14165 292 aa22.96■■□□□ 1.27
PMP22-206ENST00000494511 EHBP1L1Q8N3D4 1523 aa22.96■■□□□ 1.27
PMP22-206ENST00000494511 KDM5CP41229 1560 aa22.96■■□□□ 1.27
PMP22-206ENST00000494511 ATP10AO60312 1499 aa22.95■■□□□ 1.26
PMP22-206ENST00000494511 VPS8Q8N3P4 1428 aa22.95■■□□□ 1.26
PMP22-206ENST00000494511 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
PMP22-206ENST00000494511 SAMD9LQ8IVG5 1584 aa22.93■■□□□ 1.26
PMP22-206ENST00000494511 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
PMP22-206ENST00000494511 HNRNPMP52272 730 aaKnown RBP eCLIP22.91■■□□□ 1.26
PMP22-206ENST00000494511 TIAM1Q13009 1591 aa22.9■■□□□ 1.26
PMP22-206ENST00000494511 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
PMP22-206ENST00000494511 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
PMP22-206ENST00000494511 MLH3Q9UHC1 1453 aa22.88■■□□□ 1.25
PMP22-206ENST00000494511 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
PMP22-206ENST00000494511 ABCA6Q8N139 1617 aa22.87■■□□□ 1.25
PMP22-206ENST00000494511 FER1L4A9Z1Z3 1794 aa22.86■■□□□ 1.25
PMP22-206ENST00000494511 ZNF644Q9H582 1327 aaPredicted RBP22.85■■□□□ 1.25
PMP22-206ENST00000494511 SUPT6HQ7KZ85 1726 aaKnown RBP22.85■■□□□ 1.25
PMP22-206ENST00000494511 KIDINS220Q9ULH0 1771 aa22.84■■□□□ 1.25
PMP22-206ENST00000494511 NCOA2Q15596 1464 aa22.84■■□□□ 1.25
PMP22-206ENST00000494511 PLEKHH2Q8IVE3 1493 aa22.83■■□□□ 1.25
PMP22-206ENST00000494511 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
PMP22-206ENST00000494511 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
PMP22-206ENST00000494511 LRRC9Q6ZRR7 1453 aa22.8■■□□□ 1.24
PMP22-206ENST00000494511 KANK4Q5T7N3 995 aaPredicted RBP22.79■■□□□ 1.24
PMP22-206ENST00000494511 REREQ9P2R6 1566 aa22.77■■□□□ 1.24
PMP22-206ENST00000494511 HSPA2P54652 639 aa22.75■■□□□ 1.23
PMP22-206ENST00000494511 ATP7AQ04656 1500 aa22.75■■□□□ 1.23
PMP22-206ENST00000494511 MAP3K1Q13233 1512 aa22.73■■□□□ 1.23
PMP22-206ENST00000494511 MBD5Q9P267 1494 aa22.73■■□□□ 1.23
PMP22-206ENST00000494511 INO80Q9ULG1 1556 aaPredicted RBP22.72■■□□□ 1.23
PMP22-206ENST00000494511 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
PMP22-206ENST00000494511 CAMSAP2Q08AD1 1489 aa22.72■■□□□ 1.23
PMP22-206ENST00000494511 AGLP35573 1532 aa22.72■■□□□ 1.23
PMP22-206ENST00000494511 CEBPAP49715 358 aaPredicted RBP22.71■■□□□ 1.23
PMP22-206ENST00000494511 APLP2Q06481 763 aa22.71■■□□□ 1.23
PMP22-206ENST00000494511 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
PMP22-206ENST00000494511 A2MP01023 1474 aa22.66■■□□□ 1.22
PMP22-206ENST00000494511 CCDC141Q6ZP82 1450 aa22.65■■□□□ 1.22
PMP22-206ENST00000494511 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
PMP22-206ENST00000494511 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
PMP22-206ENST00000494511 RTEL1-TNFRSF6BF6WH68 1400 aa22.61■■□□□ 1.21
PMP22-206ENST00000494511 MYOM3Q5VTT5 1437 aa22.61■■□□□ 1.21
PMP22-206ENST00000494511 CERKQ8TCT0 537 aa22.61■■□□□ 1.21
PMP22-206ENST00000494511 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
PMP22-206ENST00000494511 RSPH4AQ5TD94 716 aa22.6■■□□□ 1.21
PMP22-206ENST00000494511 C3P01024 1663 aa22.59■■□□□ 1.21
PMP22-206ENST00000494511 GGT6Q6P531 493 aa22.59■■□□□ 1.21
PMP22-206ENST00000494511 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
PMP22-206ENST00000494511 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
PMP22-206ENST00000494511 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
PMP22-206ENST00000494511 SETD1BQ9UPS6 1966 aaKnown RBP22.57■■□□□ 1.2
PMP22-206ENST00000494511 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
PMP22-206ENST00000494511 CNTLNQ9NXG0 1405 aa22.56■■□□□ 1.2
PMP22-206ENST00000494511 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
PMP22-206ENST00000494511 CLTCQ00610 1675 aaKnown RBP22.53■■□□□ 1.2
PMP22-206ENST00000494511 UHRF1BP1Q6BDS2 1440 aa22.51■■□□□ 1.19
PMP22-206ENST00000494511 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
PMP22-206ENST00000494511 MROH2AA6NES4 1674 aa22.5■■□□□ 1.19
PMP22-206ENST00000494511 KIF3BO15066 747 aa22.5■■□□□ 1.19
PMP22-206ENST00000494511 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
PMP22-206ENST00000494511 MAST1Q9Y2H9 1570 aa22.46■■□□□ 1.19
PMP22-206ENST00000494511 FGD6Q6ZV73 1430 aa22.46■■□□□ 1.19
PMP22-206ENST00000494511 DMRT2Q9Y5R5 561 aa22.45■■□□□ 1.18
PMP22-206ENST00000494511 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
PMP22-206ENST00000494511 ABCC5O15440 1437 aa22.41■■□□□ 1.18
PMP22-206ENST00000494511 NPATQ14207 1427 aa22.4■■□□□ 1.18
PMP22-206ENST00000494511 TCOF1Q13428 1488 aaKnown RBP22.4■■□□□ 1.18
PMP22-206ENST00000494511 PTPRTO14522 1441 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms