RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 FRMPD1Q5SYB0 1578 aa13.65□□□□□ -0.22
GPATCH4-207ENST00000494414 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
GPATCH4-207ENST00000494414 NEO1Q92859 1461 aa13.64□□□□□ -0.23
GPATCH4-207ENST00000494414 RICTORQ6R327 1708 aa13.63□□□□□ -0.23
GPATCH4-207ENST00000494414 PREX2Q70Z35 1606 aa13.63□□□□□ -0.23
GPATCH4-207ENST00000494414 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
GPATCH4-207ENST00000494414 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
GPATCH4-207ENST00000494414 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
GPATCH4-207ENST00000494414 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
GPATCH4-207ENST00000494414 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
GPATCH4-207ENST00000494414 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
GPATCH4-207ENST00000494414 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.23
GPATCH4-207ENST00000494414 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
GPATCH4-207ENST00000494414 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
GPATCH4-207ENST00000494414 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
GPATCH4-207ENST00000494414 MAP3K1Q13233 1512 aa13.56□□□□□ -0.24
GPATCH4-207ENST00000494414 EHBP1L1Q8N3D4 1523 aa13.56□□□□□ -0.24
GPATCH4-207ENST00000494414 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
GPATCH4-207ENST00000494414 PLCH2O75038 1416 aa13.55□□□□□ -0.24
GPATCH4-207ENST00000494414 ARID3CA6NKF2 412 aa13.54□□□□□ -0.24
GPATCH4-207ENST00000494414 ARHGEF40Q8TER5 1519 aa13.54□□□□□ -0.24
GPATCH4-207ENST00000494414 FANCAO15360 1455 aa13.53□□□□□ -0.24
GPATCH4-207ENST00000494414 KDM5CP41229 1560 aa13.53□□□□□ -0.24
GPATCH4-207ENST00000494414 ITSN2Q9NZM3 1697 aa13.53□□□□□ -0.24
GPATCH4-207ENST00000494414 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
GPATCH4-207ENST00000494414 ABCC1P33527 1531 aa13.52□□□□□ -0.25
GPATCH4-207ENST00000494414 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
GPATCH4-207ENST00000494414 AKNAQ7Z591 1439 aa13.49□□□□□ -0.25
GPATCH4-207ENST00000494414 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
GPATCH4-207ENST00000494414 SUPT6HQ7KZ85 1726 aaKnown RBP13.48□□□□□ -0.25
GPATCH4-207ENST00000494414 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
GPATCH4-207ENST00000494414 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
GPATCH4-207ENST00000494414 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
GPATCH4-207ENST00000494414 POGZQ7Z3K3 1410 aa13.47□□□□□ -0.25
GPATCH4-207ENST00000494414 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
GPATCH4-207ENST00000494414 GPATCH8Q9UKJ3 1502 aaKnown RBP13.46□□□□□ -0.25
GPATCH4-207ENST00000494414 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-207ENST00000494414 DENND4BO75064 1496 aaPredicted RBP13.46□□□□□ -0.25
GPATCH4-207ENST00000494414 ADGRL1O94910 1474 aa13.46□□□□□ -0.25
GPATCH4-207ENST00000494414 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
GPATCH4-207ENST00000494414 REREQ9P2R6 1566 aa13.45□□□□□ -0.26
GPATCH4-207ENST00000494414 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
GPATCH4-207ENST00000494414 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
GPATCH4-207ENST00000494414 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
GPATCH4-207ENST00000494414 LRRC9Q6ZRR7 1453 aa13.43□□□□□ -0.26
GPATCH4-207ENST00000494414 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
GPATCH4-207ENST00000494414 SAMD1Q6SPF0 538 aaPredicted RBP13.42□□□□□ -0.26
GPATCH4-207ENST00000494414 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
GPATCH4-207ENST00000494414 INO80Q9ULG1 1556 aaPredicted RBP13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 ZFYVE16Q7Z3T8 1539 aa13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 ABCA6Q8N139 1617 aa13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 NCOA2Q15596 1464 aa13.41□□□□□ -0.26
GPATCH4-207ENST00000494414 BCORL1Q5H9F3 1711 aa13.4□□□□□ -0.26
GPATCH4-207ENST00000494414 DIP2CQ9Y2E4 1556 aa13.4□□□□□ -0.26
GPATCH4-207ENST00000494414 SYCP2Q9BX26 1530 aa13.39□□□□□ -0.27
GPATCH4-207ENST00000494414 SCAPERQ9BY12 1400 aa13.39□□□□□ -0.27
GPATCH4-207ENST00000494414 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
GPATCH4-207ENST00000494414 MTUS2Q5JR59 1369 aa13.38□□□□□ -0.27
GPATCH4-207ENST00000494414 KIAA1107Q9UPP5 1409 aa13.38□□□□□ -0.27
GPATCH4-207ENST00000494414 APLP2Q06481 763 aa13.37□□□□□ -0.27
GPATCH4-207ENST00000494414 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
GPATCH4-207ENST00000494414 PLXNC1O60486 1568 aa13.36□□□□□ -0.27
GPATCH4-207ENST00000494414 ARHGEF5Q12774 1597 aa13.36□□□□□ -0.27
GPATCH4-207ENST00000494414 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
GPATCH4-207ENST00000494414 EFCAB2Q5VUJ9 269 aa13.35□□□□□ -0.27
GPATCH4-207ENST00000494414 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
GPATCH4-207ENST00000494414 YEATS2Q9ULM3 1422 aa13.35□□□□□ -0.27
GPATCH4-207ENST00000494414 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
GPATCH4-207ENST00000494414 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
GPATCH4-207ENST00000494414 CACNB1Q02641 598 aaPredicted RBP13.33□□□□□ -0.28
GPATCH4-207ENST00000494414 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
GPATCH4-207ENST00000494414 ADGBQ8N7X0 1667 aa13.33□□□□□ -0.28
GPATCH4-207ENST00000494414 AGLP35573 1532 aa13.33□□□□□ -0.28
GPATCH4-207ENST00000494414 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
GPATCH4-207ENST00000494414 CAMSAP2Q08AD1 1489 aa13.32□□□□□ -0.28
GPATCH4-207ENST00000494414 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
GPATCH4-207ENST00000494414 ATP7AQ04656 1500 aa13.31□□□□□ -0.28
GPATCH4-207ENST00000494414 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
GPATCH4-207ENST00000494414 C9orf84Q5VXU9 1444 aa13.3□□□□□ -0.28
GPATCH4-207ENST00000494414 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
GPATCH4-207ENST00000494414 MIA2Q96PC5 1412 aa13.3□□□□□ -0.28
GPATCH4-207ENST00000494414 ATP10AO60312 1499 aa13.29□□□□□ -0.28
GPATCH4-207ENST00000494414 FER1L4A9Z1Z3 1794 aa13.29□□□□□ -0.28
GPATCH4-207ENST00000494414 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
GPATCH4-207ENST00000494414 TCOF1Q13428 1488 aaKnown RBP13.28□□□□□ -0.28
GPATCH4-207ENST00000494414 CCDC141Q6ZP82 1450 aa13.27□□□□□ -0.29
GPATCH4-207ENST00000494414 KANK4Q5T7N3 995 aaPredicted RBP13.26□□□□□ -0.29
GPATCH4-207ENST00000494414 PTPN23Q9H3S7 1636 aa13.26□□□□□ -0.29
GPATCH4-207ENST00000494414 DNMT1P26358 1616 aaKnown RBP13.25□□□□□ -0.29
GPATCH4-207ENST00000494414 RTEL1-TNFRSF6BF6WH68 1400 aa13.25□□□□□ -0.29
GPATCH4-207ENST00000494414 CAPN15O75808 1086 aa13.25□□□□□ -0.29
GPATCH4-207ENST00000494414 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
GPATCH4-207ENST00000494414 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
GPATCH4-207ENST00000494414 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
GPATCH4-207ENST00000494414 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
GPATCH4-207ENST00000494414 SPINK5Q9NQ38 1064 aaPredicted RBP13.23□□□□□ -0.29
GPATCH4-207ENST00000494414 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
GPATCH4-207ENST00000494414 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms