RNA–Protein interactions for RNA: ENST00000494372.1

UFM1-205, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 2

Gene UFM1, Length 777 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-205ENST00000494372 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
UFM1-205ENST00000494372 PPP1R37O75864 691 aa13.55□□□□□ -0.24
UFM1-205ENST00000494372 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
UFM1-205ENST00000494372 TMEM92Q6UXU6 159 aa13.53□□□□□ -0.24
UFM1-205ENST00000494372 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
UFM1-205ENST00000494372 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
UFM1-205ENST00000494372 ST18O60284 1047 aa13.41□□□□□ -0.26
UFM1-205ENST00000494372 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
UFM1-205ENST00000494372 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
UFM1-205ENST00000494372 SNPHO15079 494 aa13.37□□□□□ -0.27
UFM1-205ENST00000494372 HOXB3P14651 431 aaPredicted RBP13.37□□□□□ -0.27
UFM1-205ENST00000494372 POTEMA6NI47 508 aa13.35□□□□□ -0.27
UFM1-205ENST00000494372 KIF3CO14782 793 aa13.35□□□□□ -0.27
UFM1-205ENST00000494372 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
UFM1-205ENST00000494372 C2orf72A6NCS6 295 aa13.32□□□□□ -0.28
UFM1-205ENST00000494372 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
UFM1-205ENST00000494372 PDE4AP27815 886 aa13.25□□□□□ -0.29
UFM1-205ENST00000494372 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
UFM1-205ENST00000494372 TMC2Q8TDI7 906 aa13.24□□□□□ -0.29
UFM1-205ENST00000494372 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
UFM1-205ENST00000494372 CRISPLD2Q9H0B8 497 aa13.23□□□□□ -0.29
UFM1-205ENST00000494372 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
UFM1-205ENST00000494372 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
UFM1-205ENST00000494372 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
UFM1-205ENST00000494372 GPHNQ9NQX3 736 aaPredicted RBP13.2□□□□□ -0.3
UFM1-205ENST00000494372 HOXB1P14653 301 aaPredicted RBP13.17□□□□□ -0.3
UFM1-205ENST00000494372 DSG2Q14126 1118 aa13.16□□□□□ -0.3
UFM1-205ENST00000494372 MFSD10Q14728 455 aa13.16□□□□□ -0.3
UFM1-205ENST00000494372 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
UFM1-205ENST00000494372 FOXK1P85037 733 aa13.15□□□□□ -0.3
UFM1-205ENST00000494372 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
UFM1-205ENST00000494372 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
UFM1-205ENST00000494372 EMP3P54852 163 aa13.14□□□□□ -0.31
UFM1-205ENST00000494372 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
UFM1-205ENST00000494372 KHSRPQ92945 711 aaKnown RBP eCLIP13.14□□□□□ -0.31
UFM1-205ENST00000494372 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
UFM1-205ENST00000494372 ARSIQ5FYB1 569 aa13.13□□□□□ -0.31
UFM1-205ENST00000494372 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
UFM1-205ENST00000494372 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
UFM1-205ENST00000494372 FAM205CA6NFA0 338 aa13.09□□□□□ -0.31
UFM1-205ENST00000494372 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
UFM1-205ENST00000494372 SLC34A2O95436 690 aa13.08□□□□□ -0.32
UFM1-205ENST00000494372 E2F4Q16254 413 aa13.08□□□□□ -0.32
UFM1-205ENST00000494372 CDAN1Q8IWY9 1227 aa13.08□□□□□ -0.32
UFM1-205ENST00000494372 P3H3Q8IVL6 736 aa13.06□□□□□ -0.32
UFM1-205ENST00000494372 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
UFM1-205ENST00000494372 PCDHGA4Q9Y5G9 962 aa13.06□□□□□ -0.32
UFM1-205ENST00000494372 KCNV2Q8TDN2 545 aa13.04□□□□□ -0.32
UFM1-205ENST00000494372 PCDH10Q9P2E7 1040 aa13.03□□□□□ -0.32
UFM1-205ENST00000494372 NUDT7P0C024 238 aa13.02□□□□□ -0.33
UFM1-205ENST00000494372 CAMK2BQ13554 666 aa13.02□□□□□ -0.33
UFM1-205ENST00000494372 PTCD2Q8WV60 388 aaKnown RBP13.01□□□□□ -0.33
UFM1-205ENST00000494372 ERBB3P21860 1342 aa13.01□□□□□ -0.33
UFM1-205ENST00000494372 VARS2Q5ST30 1063 aaKnown RBP12.98□□□□□ -0.33
UFM1-205ENST00000494372 BCANQ96GW7 911 aa12.98□□□□□ -0.33
UFM1-205ENST00000494372 KDM4FA0A1W2PPD8 638 aa12.97□□□□□ -0.33
UFM1-205ENST00000494372 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
UFM1-205ENST00000494372 ZNF316A6NFI3 1004 aaPredicted RBP12.95□□□□□ -0.34
UFM1-205ENST00000494372 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
UFM1-205ENST00000494372 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
UFM1-205ENST00000494372 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
UFM1-205ENST00000494372 LHX6Q9UPM6 363 aa12.94□□□□□ -0.34
UFM1-205ENST00000494372 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
UFM1-205ENST00000494372 KRTAP3-3Q9BYR6 98 aa12.92□□□□□ -0.34
UFM1-205ENST00000494372 KRTAP3-2Q9BYR7 98 aa12.92□□□□□ -0.34
UFM1-205ENST00000494372 NBR1Q14596 966 aa12.91□□□□□ -0.34
UFM1-205ENST00000494372 TBC1D12O60347 775 aa12.88□□□□□ -0.35
UFM1-205ENST00000494372 ZNF687Q8N1G0 1237 aa12.87□□□□□ -0.35
UFM1-205ENST00000494372 DPYSL4O14531 572 aa12.86□□□□□ -0.35
UFM1-205ENST00000494372 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
UFM1-205ENST00000494372 MAP3K9P80192 1104 aa12.83□□□□□ -0.36
UFM1-205ENST00000494372 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
UFM1-205ENST00000494372 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
UFM1-205ENST00000494372 EVI5O60447 810 aa12.79□□□□□ -0.36
UFM1-205ENST00000494372 SEMA3EO15041 775 aa12.78□□□□□ -0.36
UFM1-205ENST00000494372 PDIA6Q15084 440 aa12.78□□□□□ -0.36
UFM1-205ENST00000494372 ANO8Q9HCE9 1232 aaPredicted RBP12.78□□□□□ -0.36
UFM1-205ENST00000494372 SPNS2Q8IVW8 549 aa12.76□□□□□ -0.37
UFM1-205ENST00000494372 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
UFM1-205ENST00000494372 TESPA1A2RU30 521 aaPredicted RBP12.73□□□□□ -0.37
UFM1-205ENST00000494372 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
UFM1-205ENST00000494372 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
UFM1-205ENST00000494372 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
UFM1-205ENST00000494372 FOSBP53539 338 aa12.69□□□□□ -0.38
UFM1-205ENST00000494372 MLLT3P42568 568 aaPredicted RBP12.68□□□□□ -0.38
UFM1-205ENST00000494372 PSEN2P49810 448 aa12.67□□□□□ -0.38
UFM1-205ENST00000494372 SMYD5Q6GMV2 418 aa12.67□□□□□ -0.38
UFM1-205ENST00000494372 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
UFM1-205ENST00000494372 ARHGAP33O14559 1287 aa12.66□□□□□ -0.38
UFM1-205ENST00000494372 PBX2P40425 430 aa12.66□□□□□ -0.38
UFM1-205ENST00000494372 PTGER2P43116 358 aa12.66□□□□□ -0.38
UFM1-205ENST00000494372 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
UFM1-205ENST00000494372 LSM11P83369 360 aaKnown RBP eCLIP12.65□□□□□ -0.38
UFM1-205ENST00000494372 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
UFM1-205ENST00000494372 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
UFM1-205ENST00000494372 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
UFM1-205ENST00000494372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.64□□□□□ -0.39
UFM1-205ENST00000494372 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
UFM1-205ENST00000494372 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
UFM1-205ENST00000494372 DDX12PQ92771 950 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms