RNA–Protein interactions for RNA: ENST00000494144.5

CCSER2-207, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 1,562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-207ENST00000494144 CFAP44Q96MT7 982 aa10.12□□□□□ -0.79
CCSER2-207ENST00000494144 PODXL2Q9NZ53 605 aa10.09□□□□□ -0.79
CCSER2-207ENST00000494144 LSM11P83369 360 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCSER2-207ENST00000494144 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
CCSER2-207ENST00000494144 L3MBTL3Q96JM7 780 aaPredicted RBP10.07□□□□□ -0.8
CCSER2-207ENST00000494144 TSHZ2Q9NRE2 1034 aa10.07□□□□□ -0.8
CCSER2-207ENST00000494144 DNAJC5Q9H3Z4 198 aa10.04□□□□□ -0.8
CCSER2-207ENST00000494144 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
CCSER2-207ENST00000494144 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
CCSER2-207ENST00000494144 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
CCSER2-207ENST00000494144 IFFO2Q5TF58 517 aa10.01□□□□□ -0.81
CCSER2-207ENST00000494144 A0A0G2JS52 829 aa10□□□□□ -0.81
CCSER2-207ENST00000494144 PLCD3Q8N3E9 789 aa10□□□□□ -0.81
CCSER2-207ENST00000494144 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
CCSER2-207ENST00000494144 TRAF7Q6Q0C0 670 aa9.98□□□□□ -0.81
CCSER2-207ENST00000494144 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
CCSER2-207ENST00000494144 FAM212AQ96EL1 285 aa9.96□□□□□ -0.82
CCSER2-207ENST00000494144 NUBP1P53384 320 aa9.94□□□□□ -0.82
CCSER2-207ENST00000494144 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
CCSER2-207ENST00000494144 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
CCSER2-207ENST00000494144 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
CCSER2-207ENST00000494144 MKRN3Q13064 507 aaKnown RBP9.88□□□□□ -0.83
CCSER2-207ENST00000494144 SUPT5HO00267 1087 aaKnown RBP9.84□□□□□ -0.83
CCSER2-207ENST00000494144 ZNF787Q6DD87 383 aa9.84□□□□□ -0.83
CCSER2-207ENST00000494144 NPM2Q86SE8 214 aaKnown RBP9.84□□□□□ -0.83
CCSER2-207ENST00000494144 LAPTM4AQ15012 233 aa9.83□□□□□ -0.84
CCSER2-207ENST00000494144 ZSWIM6Q9HCJ5 1215 aa9.82□□□□□ -0.84
CCSER2-207ENST00000494144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.82□□□□□ -0.842e-10■□□□□ 11.2
CCSER2-207ENST00000494144 PCDHB8Q9UN66 801 aa9.82□□□□□ -0.84
CCSER2-207ENST00000494144 KLHL34Q8N239 644 aa9.81□□□□□ -0.84
CCSER2-207ENST00000494144 PYGBP11216 843 aa9.8□□□□□ -0.84
CCSER2-207ENST00000494144 G3V3G9 751 aa9.78□□□□□ -0.84
CCSER2-207ENST00000494144 DCAF8Q5TAQ9 597 aa9.78□□□□□ -0.84
CCSER2-207ENST00000494144 GPR153Q6NV75 609 aa9.77□□□□□ -0.85
CCSER2-207ENST00000494144 RGL2O15211 777 aa9.76□□□□□ -0.85
CCSER2-207ENST00000494144 TRIM26Q12899 539 aaPredicted RBP9.76□□□□□ -0.85
CCSER2-207ENST00000494144 SPOCK2Q92563 424 aa9.75□□□□□ -0.85
CCSER2-207ENST00000494144 PBX2P40425 430 aa9.74□□□□□ -0.85
CCSER2-207ENST00000494144 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
CCSER2-207ENST00000494144 POTEEQ6S8J3 1075 aa9.71□□□□□ -0.85
CCSER2-207ENST00000494144 SUZ12Q15022 739 aaKnown RBP9.71□□□□□ -0.86
CCSER2-207ENST00000494144 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
CCSER2-207ENST00000494144 BOLA1Q9Y3E2 137 aa9.7□□□□□ -0.86
CCSER2-207ENST00000494144 CHGAP10645 457 aaKnown RBP9.68□□□□□ -0.86
CCSER2-207ENST00000494144 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
CCSER2-207ENST00000494144 HRCP23327 699 aa9.66□□□□□ -0.86
CCSER2-207ENST00000494144 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
CCSER2-207ENST00000494144 ILDR1Q86SU0 546 aaPredicted RBP9.66□□□□□ -0.86
CCSER2-207ENST00000494144 KCTD12Q96CX2 325 aaKnown RBP9.66□□□□□ -0.86
CCSER2-207ENST00000494144 ADGRD1Q6QNK2 874 aa9.64□□□□□ -0.87
CCSER2-207ENST00000494144 BRPF1P55201 1214 aaPredicted RBP9.63□□□□□ -0.87
CCSER2-207ENST00000494144 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
CCSER2-207ENST00000494144 GFRA3O60609 400 aa9.61□□□□□ -0.87
CCSER2-207ENST00000494144 GSE1Q14687 1217 aa9.61□□□□□ -0.87
CCSER2-207ENST00000494144 PSEN1P49768 467 aa9.6□□□□□ -0.87
CCSER2-207ENST00000494144 AXIN2Q9Y2T1 843 aa9.59□□□□□ -0.87
CCSER2-207ENST00000494144 HS6ST3Q8IZP7 471 aa9.56□□□□□ -0.88
CCSER2-207ENST00000494144 LCE2AQ5TA79 106 aaPredicted RBP9.55□□□□□ -0.88
CCSER2-207ENST00000494144 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
CCSER2-207ENST00000494144 HRO43593 1189 aa9.54□□□□□ -0.88
CCSER2-207ENST00000494144 ARSIQ5FYB1 569 aa9.53□□□□□ -0.88
CCSER2-207ENST00000494144 PTPN5P54829 565 aa9.52□□□□□ -0.89
CCSER2-207ENST00000494144 LMOD2Q6P5Q4 547 aa9.5□□□□□ -0.89
CCSER2-207ENST00000494144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCSER2-207ENST00000494144 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
CCSER2-207ENST00000494144 TREML4Q6UXN2 200 aa9.49□□□□□ -0.89
CCSER2-207ENST00000494144 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
CCSER2-207ENST00000494144 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
CCSER2-207ENST00000494144 NRG2O14511 850 aaPredicted RBP9.47□□□□□ -0.89
CCSER2-207ENST00000494144 P3H3Q8IVL6 736 aa9.46□□□□□ -0.89
CCSER2-207ENST00000494144 ZMYND15Q9H091 742 aa9.46□□□□□ -0.89
CCSER2-207ENST00000494144 NEUROD2Q15784 382 aa9.46□□□□□ -0.9
CCSER2-207ENST00000494144 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
CCSER2-207ENST00000494144 TK2O00142 265 aa9.45□□□□□ -0.9
CCSER2-207ENST00000494144 KHSRPQ92945 711 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCSER2-207ENST00000494144 CCDC9Q9Y3X0 531 aaKnown RBP9.44□□□□□ -0.9
CCSER2-207ENST00000494144 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
CCSER2-207ENST00000494144 TTBK1Q5TCY1 1321 aaPredicted RBP9.43□□□□□ -0.9
CCSER2-207ENST00000494144 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
CCSER2-207ENST00000494144 NKX1-1Q15270 411 aaPredicted RBP9.41□□□□□ -0.9
CCSER2-207ENST00000494144 TRIM41Q8WV44 630 aa9.4□□□□□ -0.9
CCSER2-207ENST00000494144 MYT1Q01538 1121 aa9.39□□□□□ -0.91
CCSER2-207ENST00000494144 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
CCSER2-207ENST00000494144 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
CCSER2-207ENST00000494144 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
CCSER2-207ENST00000494144 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
CCSER2-207ENST00000494144 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
CCSER2-207ENST00000494144 ZC3H15Q8WU90 426 aaKnown RBP9.33□□□□□ -0.92
CCSER2-207ENST00000494144 ARID3AQ99856 593 aa9.31□□□□□ -0.92
CCSER2-207ENST00000494144 STAC3Q96MF2 364 aa9.3□□□□□ -0.92
CCSER2-207ENST00000494144 PDIA4P13667 645 aaKnown RBP9.29□□□□□ -0.92
CCSER2-207ENST00000494144 SLC24A3Q9HC58 644 aa9.29□□□□□ -0.92
CCSER2-207ENST00000494144 RNF25Q96BH1 459 aaPredicted RBP9.29□□□□□ -0.92
CCSER2-207ENST00000494144 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
CCSER2-207ENST00000494144 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
CCSER2-207ENST00000494144 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
CCSER2-207ENST00000494144 DMRTA1Q5VZB9 504 aa9.26□□□□□ -0.93
CCSER2-207ENST00000494144 EFCAB3Q8N7B9 438 aa9.26□□□□□ -0.93
CCSER2-207ENST00000494144 KRTAP9-2Q9BYQ4 174 aa9.26□□□□□ -0.93
CCSER2-207ENST00000494144 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms