RNA–Protein interactions for RNA: ENST00000494044.1

LPP-218, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-218ENST00000494044 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
LPP-218ENST00000494044 PPP1R37O75864 691 aa10.68□□□□□ -0.7
LPP-218ENST00000494044 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
LPP-218ENST00000494044 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
LPP-218ENST00000494044 DNAJC5Q9H3Z4 198 aa10.67□□□□□ -0.7
LPP-218ENST00000494044 DCAF8L2P0C7V8 631 aa10.66□□□□□ -0.7
LPP-218ENST00000494044 RIMBP2O15034 1052 aa10.63□□□□□ -0.71
LPP-218ENST00000494044 EMP3P54852 163 aa10.63□□□□□ -0.71
LPP-218ENST00000494044 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
LPP-218ENST00000494044 C2orf72A6NCS6 295 aa10.61□□□□□ -0.71
LPP-218ENST00000494044 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
LPP-218ENST00000494044 KIF3CO14782 793 aa10.6□□□□□ -0.71
LPP-218ENST00000494044 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
LPP-218ENST00000494044 TMC2Q8TDI7 906 aa10.59□□□□□ -0.71
LPP-218ENST00000494044 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
LPP-218ENST00000494044 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
LPP-218ENST00000494044 SLC24A1O60721 1099 aa10.56□□□□□ -0.72
LPP-218ENST00000494044 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
LPP-218ENST00000494044 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
LPP-218ENST00000494044 POTEB3A0JP26 581 aa10.53□□□□□ -0.72
LPP-218ENST00000494044 POTEBQ6S5H4 581 aa10.53□□□□□ -0.72
LPP-218ENST00000494044 ERBB3P21860 1342 aa10.53□□□□□ -0.72
LPP-218ENST00000494044 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
LPP-218ENST00000494044 ARSIQ5FYB1 569 aa10.52□□□□□ -0.73
LPP-218ENST00000494044 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
LPP-218ENST00000494044 SLC34A2O95436 690 aa10.48□□□□□ -0.73
LPP-218ENST00000494044 FOXK1P85037 733 aa10.46□□□□□ -0.73
LPP-218ENST00000494044 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.73
LPP-218ENST00000494044 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
LPP-218ENST00000494044 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
LPP-218ENST00000494044 DSG2Q14126 1118 aa10.43□□□□□ -0.74
LPP-218ENST00000494044 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
LPP-218ENST00000494044 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
LPP-218ENST00000494044 PDE4AP27815 886 aa10.41□□□□□ -0.74
LPP-218ENST00000494044 NUDT7P0C024 238 aa10.4□□□□□ -0.74
LPP-218ENST00000494044 KRTAP3-3Q9BYR6 98 aa10.4□□□□□ -0.74
LPP-218ENST00000494044 KRTAP3-2Q9BYR7 98 aa10.4□□□□□ -0.74
LPP-218ENST00000494044 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
LPP-218ENST00000494044 ZNF687Q8N1G0 1237 aa10.39□□□□□ -0.75
LPP-218ENST00000494044 PTCD2Q8WV60 388 aaKnown RBP10.39□□□□□ -0.75
LPP-218ENST00000494044 CRISPLD2Q9H0B8 497 aa10.39□□□□□ -0.75
LPP-218ENST00000494044 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
LPP-218ENST00000494044 TBC1D12O60347 775 aa10.36□□□□□ -0.75
LPP-218ENST00000494044 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
LPP-218ENST00000494044 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
LPP-218ENST00000494044 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
LPP-218ENST00000494044 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.32□□□□□ -0.76
LPP-218ENST00000494044 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
LPP-218ENST00000494044 SPRYD3Q8NCJ5 442 aa10.3□□□□□ -0.76
LPP-218ENST00000494044 CADPS2Q86UW7 1296 aa10.29□□□□□ -0.76
LPP-218ENST00000494044 OXER1Q8TDS5 423 aa10.29□□□□□ -0.76
LPP-218ENST00000494044 DDX27Q96GQ7 796 aaKnown RBP10.29□□□□□ -0.76
LPP-218ENST00000494044 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
LPP-218ENST00000494044 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
LPP-218ENST00000494044 MFSD10Q14728 455 aa10.27□□□□□ -0.77
LPP-218ENST00000494044 PBX2P40425 430 aa10.23□□□□□ -0.77
LPP-218ENST00000494044 ANKRD13DQ6ZTN6 518 aa10.23□□□□□ -0.77
LPP-218ENST00000494044 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
LPP-218ENST00000494044 CFAP44Q96MT7 982 aa10.22□□□□□ -0.77
LPP-218ENST00000494044 AXIN2Q9Y2T1 843 aa10.21□□□□□ -0.77
LPP-218ENST00000494044 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
LPP-218ENST00000494044 LSM11P83369 360 aaKnown RBP eCLIP10.2□□□□□ -0.78
LPP-218ENST00000494044 POTEEQ6S8J3 1075 aa10.2□□□□□ -0.78
LPP-218ENST00000494044 PPP4R3BQ5MIZ7 849 aa10.19□□□□□ -0.78
LPP-218ENST00000494044 ARHGAP33O14559 1287 aa10.18□□□□□ -0.78
LPP-218ENST00000494044 EVI5O60447 810 aa10.18□□□□□ -0.78
LPP-218ENST00000494044 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
LPP-218ENST00000494044 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
LPP-218ENST00000494044 PTGER2P43116 358 aa10.14□□□□□ -0.79
LPP-218ENST00000494044 ZNF454Q8N9F8 522 aa10.14□□□□□ -0.79
LPP-218ENST00000494044 MYT1LQ9UL68 1186 aa10.14□□□□□ -0.79
LPP-218ENST00000494044 PSEN2P49810 448 aa10.13□□□□□ -0.79
LPP-218ENST00000494044 CAMK2BQ13554 666 aa10.13□□□□□ -0.79
LPP-218ENST00000494044 FOSBP53539 338 aa10.12□□□□□ -0.79
LPP-218ENST00000494044 RNF166Q96A37 237 aaPredicted RBP10.11□□□□□ -0.79
LPP-218ENST00000494044 KCNH8Q96L42 1107 aa10.1□□□□□ -0.79
LPP-218ENST00000494044 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
LPP-218ENST00000494044 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
LPP-218ENST00000494044 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
LPP-218ENST00000494044 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
LPP-218ENST00000494044 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
LPP-218ENST00000494044 TK2O00142 265 aa10.07□□□□□ -0.8
LPP-218ENST00000494044 WDR70Q9NW82 654 aa10.07□□□□□ -0.8
LPP-218ENST00000494044 DPYSL4O14531 572 aa10.06□□□□□ -0.8
LPP-218ENST00000494044 ZDHHC16Q969W1 377 aa10.06□□□□□ -0.8
LPP-218ENST00000494044 PTPREP23469 700 aa10.05□□□□□ -0.8
LPP-218ENST00000494044 E2F4Q16254 413 aa10.03□□□□□ -0.8
LPP-218ENST00000494044 ADAM33Q9BZ11 813 aa10.03□□□□□ -0.8
LPP-218ENST00000494044 STAC3Q96MF2 364 aa10.02□□□□□ -0.81
LPP-218ENST00000494044 PCDHGA10Q9Y5H3 936 aa10.02□□□□□ -0.81
LPP-218ENST00000494044 HRO43593 1189 aa10.01□□□□□ -0.81
LPP-218ENST00000494044 PHF14O94880 888 aa10.01□□□□□ -0.81
LPP-218ENST00000494044 VPS9D1Q9Y2B5 631 aa10□□□□□ -0.81
LPP-218ENST00000494044 TYW1BQ6NUM6 668 aa9.99□□□□□ -0.81
LPP-218ENST00000494044 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
LPP-218ENST00000494044 SLC4A5Q9BY07 1137 aa9.99□□□□□ -0.81
LPP-218ENST00000494044 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
LPP-218ENST00000494044 EPAS1Q99814 870 aa9.98□□□□□ -0.81
LPP-218ENST00000494044 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
LPP-218ENST00000494044 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms