RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
SATB1-217ENST00000493952 DENND4BO75064 1496 aaPredicted RBP25.76■■□□□ 1.71
SATB1-217ENST00000493952 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
SATB1-217ENST00000493952 ZMYM4Q5VZL5 1548 aa25.72■■□□□ 1.71
SATB1-217ENST00000493952 EFCAB2Q5VUJ9 269 aa25.71■■□□□ 1.71
SATB1-217ENST00000493952 ITSN2Q9NZM3 1697 aa25.71■■□□□ 1.71
SATB1-217ENST00000493952 SUPT6HQ7KZ85 1726 aaKnown RBP25.7■■□□□ 1.7
SATB1-217ENST00000493952 SCAPERQ9BY12 1400 aa25.69■■□□□ 1.7
SATB1-217ENST00000493952 ARHGEF40Q8TER5 1519 aa25.68■■□□□ 1.7
SATB1-217ENST00000493952 POGZQ7Z3K3 1410 aa25.68■■□□□ 1.7
SATB1-217ENST00000493952 ABCC1P33527 1531 aa25.67■■□□□ 1.7
SATB1-217ENST00000493952 GPATCH8Q9UKJ3 1502 aaKnown RBP25.67■■□□□ 1.7
SATB1-217ENST00000493952 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
SATB1-217ENST00000493952 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
SATB1-217ENST00000493952 KDM5CP41229 1560 aa25.61■■□□□ 1.69
SATB1-217ENST00000493952 ZFYVE16Q7Z3T8 1539 aa25.61■■□□□ 1.69
SATB1-217ENST00000493952 LRRC9Q6ZRR7 1453 aa25.6■■□□□ 1.69
SATB1-217ENST00000493952 KDM4FA0A1W2PPD8 638 aa25.6■■□□□ 1.69
SATB1-217ENST00000493952 ZNF518AQ6AHZ1 1483 aa25.6■■□□□ 1.69
SATB1-217ENST00000493952 CCNB3Q8WWL7 1395 aa25.59■■□□□ 1.69
SATB1-217ENST00000493952 ARHGEF12Q9NZN5 1544 aa25.59■■□□□ 1.69
SATB1-217ENST00000493952 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
SATB1-217ENST00000493952 SIGLEC1Q9BZZ2 1709 aa25.58■■□□□ 1.69
SATB1-217ENST00000493952 MAGI2Q86UL8 1455 aa25.58■■□□□ 1.69
SATB1-217ENST00000493952 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
SATB1-217ENST00000493952 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
SATB1-217ENST00000493952 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
SATB1-217ENST00000493952 SYCP2Q9BX26 1530 aa25.56■■□□□ 1.68
SATB1-217ENST00000493952 BCORL1Q5H9F3 1711 aa25.53■■□□□ 1.68
SATB1-217ENST00000493952 TRAPPC8Q9Y2L5 1435 aa25.53■■□□□ 1.68
SATB1-217ENST00000493952 ZNF777Q9ULD5 760 aaPredicted RBP25.51■■□□□ 1.67
SATB1-217ENST00000493952 KIDINS220Q9ULH0 1771 aa25.51■■□□□ 1.67
SATB1-217ENST00000493952 ABCA6Q8N139 1617 aa25.5■■□□□ 1.67
SATB1-217ENST00000493952 CFDP1Q9UEE9 299 aaPredicted RBP25.5■■□□□ 1.67
SATB1-217ENST00000493952 ADAMTSL3P82987 1691 aa25.49■■□□□ 1.67
SATB1-217ENST00000493952 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
SATB1-217ENST00000493952 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
SATB1-217ENST00000493952 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
SATB1-217ENST00000493952 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
SATB1-217ENST00000493952 MLH3Q9UHC1 1453 aa25.46■■□□□ 1.67
SATB1-217ENST00000493952 KIAA1107Q9UPP5 1409 aa25.45■■□□□ 1.66
SATB1-217ENST00000493952 ATP10AO60312 1499 aa25.43■■□□□ 1.66
SATB1-217ENST00000493952 INO80Q9ULG1 1556 aaPredicted RBP25.43■■□□□ 1.66
SATB1-217ENST00000493952 MADDQ8WXG6 1647 aa25.42■■□□□ 1.66
SATB1-217ENST00000493952 APLP2Q06481 763 aa25.42■■□□□ 1.66
SATB1-217ENST00000493952 C9orf84Q5VXU9 1444 aa25.42■■□□□ 1.66
SATB1-217ENST00000493952 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
SATB1-217ENST00000493952 ZNF644Q9H582 1327 aaPredicted RBP25.4■■□□□ 1.66
SATB1-217ENST00000493952 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
SATB1-217ENST00000493952 HNRNPMP52272 730 aaKnown RBP eCLIP25.4■■□□□ 1.66
SATB1-217ENST00000493952 ARID4BQ4LE39 1312 aaPredicted RBP25.39■■□□□ 1.66
SATB1-217ENST00000493952 ATP7AQ04656 1500 aa25.38■■□□□ 1.65
SATB1-217ENST00000493952 MBD5Q9P267 1494 aa25.38■■□□□ 1.65
SATB1-217ENST00000493952 RIMS1Q86UR5 1692 aaKnown RBP25.38■■□□□ 1.65
SATB1-217ENST00000493952 FER1L4A9Z1Z3 1794 aa25.38■■□□□ 1.65
SATB1-217ENST00000493952 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
SATB1-217ENST00000493952 MYOM3Q5VTT5 1437 aa25.35■■□□□ 1.65
SATB1-217ENST00000493952 ARHGEF5Q12774 1597 aa25.33■■□□□ 1.65
SATB1-217ENST00000493952 ADGBQ8N7X0 1667 aa25.32■■□□□ 1.64
SATB1-217ENST00000493952 SPAG9O60271 1321 aaKnown RBP25.31■■□□□ 1.64
SATB1-217ENST00000493952 CCDC141Q6ZP82 1450 aa25.3■■□□□ 1.64
SATB1-217ENST00000493952 MIA2Q96PC5 1412 aa25.29■■□□□ 1.64
SATB1-217ENST00000493952 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
SATB1-217ENST00000493952 PTPRMP28827 1452 aa25.28■■□□□ 1.64
SATB1-217ENST00000493952 AGLP35573 1532 aa25.27■■□□□ 1.64
SATB1-217ENST00000493952 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
SATB1-217ENST00000493952 CROCC2H7BZ55 1655 aa25.24■■□□□ 1.63
SATB1-217ENST00000493952 MLECQ14165 292 aa25.24■■□□□ 1.63
SATB1-217ENST00000493952 RTEL1-TNFRSF6BF6WH68 1400 aa25.22■■□□□ 1.63
SATB1-217ENST00000493952 MAST1Q9Y2H9 1570 aa25.2■■□□□ 1.62
SATB1-217ENST00000493952 A2MP01023 1474 aa25.2■■□□□ 1.62
SATB1-217ENST00000493952 FGD6Q6ZV73 1430 aa25.19■■□□□ 1.62
SATB1-217ENST00000493952 RSPH4AQ5TD94 716 aa25.18■■□□□ 1.62
SATB1-217ENST00000493952 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
SATB1-217ENST00000493952 DNMT1P26358 1616 aaKnown RBP25.15■■□□□ 1.62
SATB1-217ENST00000493952 C3P01024 1663 aa25.13■■□□□ 1.61
SATB1-217ENST00000493952 MROH2AA6NES4 1674 aa25.1■■□□□ 1.61
SATB1-217ENST00000493952 CLTCQ00610 1675 aaKnown RBP25.1■■□□□ 1.61
SATB1-217ENST00000493952 TSPY4P0CV99 314 aa25.08■■□□□ 1.61
SATB1-217ENST00000493952 TSPY10P0CW01 314 aa25.08■■□□□ 1.61
SATB1-217ENST00000493952 SHANK2Q9UPX8 1470 aa25.08■■□□□ 1.6
SATB1-217ENST00000493952 ABCC5O15440 1437 aa25.07■■□□□ 1.6
SATB1-217ENST00000493952 DHX29Q7Z478 1369 aaKnown RBP25.06■■□□□ 1.6
SATB1-217ENST00000493952 DAPK1P53355 1430 aa25.06■■□□□ 1.6
SATB1-217ENST00000493952 PLPPR3Q6T4P5 718 aa25.04■■□□□ 1.6
SATB1-217ENST00000493952 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
SATB1-217ENST00000493952 PREX1Q8TCU6 1659 aa25.03■■□□□ 1.6
SATB1-217ENST00000493952 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
SATB1-217ENST00000493952 CNTLNQ9NXG0 1405 aa25■■□□□ 1.59
SATB1-217ENST00000493952 RNF17Q9BXT8 1623 aaKnown RBP25■■□□□ 1.59
SATB1-217ENST00000493952 SETD1BQ9UPS6 1966 aaKnown RBP25■■□□□ 1.59
SATB1-217ENST00000493952 CEBPAP49715 358 aaPredicted RBP24.98■■□□□ 1.59
SATB1-217ENST00000493952 DUOX2Q9NRD8 1548 aa24.97■■□□□ 1.59
SATB1-217ENST00000493952 LMTK3Q96Q04 1460 aa24.97■■□□□ 1.59
SATB1-217ENST00000493952 GGT6Q6P531 493 aa24.97■■□□□ 1.59
SATB1-217ENST00000493952 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
SATB1-217ENST00000493952 FAM50AQ14320 339 aaKnown RBP24.95■■□□□ 1.58
SATB1-217ENST00000493952 KIF3BO15066 747 aa24.94■■□□□ 1.58
SATB1-217ENST00000493952 MROH1Q8NDA8 1641 aa24.94■■□□□ 1.58
SATB1-217ENST00000493952 FAM135AQ9P2D6 1515 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms