RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CCDC18Q5T9S5 1454 aa20.44■□□□□ 0.86
HSPG2-212ENST00000493940 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
HSPG2-212ENST00000493940 SCAPERQ9BY12 1400 aa20.43■□□□□ 0.86
HSPG2-212ENST00000493940 YEATS2Q9ULM3 1422 aa20.41■□□□□ 0.86
HSPG2-212ENST00000493940 ADAMTSL3P82987 1691 aa20.41■□□□□ 0.86
HSPG2-212ENST00000493940 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
HSPG2-212ENST00000493940 PREX2Q70Z35 1606 aa20.4■□□□□ 0.86
HSPG2-212ENST00000493940 BCORL1Q5H9F3 1711 aa20.39■□□□□ 0.86
HSPG2-212ENST00000493940 ARHGEF40Q8TER5 1519 aa20.39■□□□□ 0.85
HSPG2-212ENST00000493940 EFCAB2Q5VUJ9 269 aa20.39■□□□□ 0.85
HSPG2-212ENST00000493940 ARHGAP5Q13017 1502 aa20.38■□□□□ 0.85
HSPG2-212ENST00000493940 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
HSPG2-212ENST00000493940 ARHGEF12Q9NZN5 1544 aa20.36■□□□□ 0.85
HSPG2-212ENST00000493940 ZFYVE16Q7Z3T8 1539 aa20.33■□□□□ 0.85
HSPG2-212ENST00000493940 AFAP1Q8N556 730 aa20.33■□□□□ 0.85
HSPG2-212ENST00000493940 MADDQ8WXG6 1647 aa20.32■□□□□ 0.84
HSPG2-212ENST00000493940 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
HSPG2-212ENST00000493940 GPATCH8Q9UKJ3 1502 aaKnown RBP20.3■□□□□ 0.84
HSPG2-212ENST00000493940 KDM5CP41229 1560 aa20.29■□□□□ 0.84
HSPG2-212ENST00000493940 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
HSPG2-212ENST00000493940 ABCC1P33527 1531 aa20.29■□□□□ 0.84
HSPG2-212ENST00000493940 MAGI2Q86UL8 1455 aa20.29■□□□□ 0.84
HSPG2-212ENST00000493940 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
HSPG2-212ENST00000493940 ARID4BQ4LE39 1312 aaPredicted RBP20.28■□□□□ 0.84
HSPG2-212ENST00000493940 RIMS1Q86UR5 1692 aaKnown RBP20.27■□□□□ 0.84
HSPG2-212ENST00000493940 PTPRMP28827 1452 aa20.26■□□□□ 0.83
HSPG2-212ENST00000493940 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
HSPG2-212ENST00000493940 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
HSPG2-212ENST00000493940 ATP10AO60312 1499 aa20.24■□□□□ 0.83
HSPG2-212ENST00000493940 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
HSPG2-212ENST00000493940 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
HSPG2-212ENST00000493940 TIAM1Q13009 1591 aa20.23■□□□□ 0.83
HSPG2-212ENST00000493940 DIP2CQ9Y2E4 1556 aa20.23■□□□□ 0.83
HSPG2-212ENST00000493940 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-212ENST00000493940 HNRNPMP52272 730 aaKnown RBP eCLIP20.2■□□□□ 0.82
HSPG2-212ENST00000493940 MLECQ14165 292 aa20.2■□□□□ 0.82
HSPG2-212ENST00000493940 FBXO41Q8TF61 875 aa20.2■□□□□ 0.82
HSPG2-212ENST00000493940 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
HSPG2-212ENST00000493940 SYCP2Q9BX26 1530 aa20.2■□□□□ 0.82
HSPG2-212ENST00000493940 FER1L4A9Z1Z3 1794 aa20.2■□□□□ 0.82
HSPG2-212ENST00000493940 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
HSPG2-212ENST00000493940 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
HSPG2-212ENST00000493940 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
HSPG2-212ENST00000493940 C9orf84Q5VXU9 1444 aa20.18■□□□□ 0.82
HSPG2-212ENST00000493940 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
HSPG2-212ENST00000493940 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
HSPG2-212ENST00000493940 SUPT6HQ7KZ85 1726 aaKnown RBP20.14■□□□□ 0.81
HSPG2-212ENST00000493940 MYT1LQ9UL68 1186 aa20.14■□□□□ 0.81
HSPG2-212ENST00000493940 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-212ENST00000493940 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
HSPG2-212ENST00000493940 NCOA2Q15596 1464 aa20.12■□□□□ 0.81
HSPG2-212ENST00000493940 PLPPR3Q6T4P5 718 aa20.11■□□□□ 0.81
HSPG2-212ENST00000493940 KIAA1107Q9UPP5 1409 aa20.1■□□□□ 0.81
HSPG2-212ENST00000493940 LRRC9Q6ZRR7 1453 aa20.09■□□□□ 0.81
HSPG2-212ENST00000493940 MBD5Q9P267 1494 aa20.09■□□□□ 0.81
HSPG2-212ENST00000493940 INO80Q9ULG1 1556 aaPredicted RBP20.08■□□□□ 0.81
HSPG2-212ENST00000493940 LMTK3Q96Q04 1460 aa20.08■□□□□ 0.81
HSPG2-212ENST00000493940 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-212ENST00000493940 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
HSPG2-212ENST00000493940 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
HSPG2-212ENST00000493940 AGLP35573 1532 aa20.05■□□□□ 0.8
HSPG2-212ENST00000493940 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
HSPG2-212ENST00000493940 MAP3K1Q13233 1512 aa20.03■□□□□ 0.8
HSPG2-212ENST00000493940 C3P01024 1663 aa20.03■□□□□ 0.8
HSPG2-212ENST00000493940 CAMSAP2Q08AD1 1489 aa20.02■□□□□ 0.8
HSPG2-212ENST00000493940 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
HSPG2-212ENST00000493940 SETD1BQ9UPS6 1966 aaKnown RBP20■□□□□ 0.79
HSPG2-212ENST00000493940 PLXNC1O60486 1568 aa20■□□□□ 0.79
HSPG2-212ENST00000493940 HSPA2P54652 639 aa19.98■□□□□ 0.79
HSPG2-212ENST00000493940 A2MP01023 1474 aa19.96■□□□□ 0.79
HSPG2-212ENST00000493940 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
HSPG2-212ENST00000493940 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
HSPG2-212ENST00000493940 ARHGEF5Q12774 1597 aa19.93■□□□□ 0.78
HSPG2-212ENST00000493940 CCDC141Q6ZP82 1450 aa19.92■□□□□ 0.78
HSPG2-212ENST00000493940 RTEL1-TNFRSF6BF6WH68 1400 aa19.92■□□□□ 0.78
HSPG2-212ENST00000493940 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
HSPG2-212ENST00000493940 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
HSPG2-212ENST00000493940 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
HSPG2-212ENST00000493940 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
HSPG2-212ENST00000493940 GGT6Q6P531 493 aa19.87■□□□□ 0.77
HSPG2-212ENST00000493940 CERKQ8TCT0 537 aa19.87■□□□□ 0.77
HSPG2-212ENST00000493940 MIA2Q96PC5 1412 aa19.85■□□□□ 0.77
HSPG2-212ENST00000493940 ZMYM3Q14202 1370 aa19.84■□□□□ 0.77
HSPG2-212ENST00000493940 RSPH4AQ5TD94 716 aa19.84■□□□□ 0.77
HSPG2-212ENST00000493940 PTPN23Q9H3S7 1636 aa19.84■□□□□ 0.77
HSPG2-212ENST00000493940 MAST1Q9Y2H9 1570 aa19.83■□□□□ 0.77
HSPG2-212ENST00000493940 CNTLNQ9NXG0 1405 aa19.83■□□□□ 0.76
HSPG2-212ENST00000493940 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
HSPG2-212ENST00000493940 CROCC2H7BZ55 1655 aa19.81■□□□□ 0.76
HSPG2-212ENST00000493940 APLP2Q06481 763 aa19.81■□□□□ 0.76
HSPG2-212ENST00000493940 KIF3BO15066 747 aa19.8■□□□□ 0.76
HSPG2-212ENST00000493940 TSPY4P0CV99 314 aa19.79■□□□□ 0.76
HSPG2-212ENST00000493940 TSPY10P0CW01 314 aa19.79■□□□□ 0.76
HSPG2-212ENST00000493940 CFAP65Q6ZU64 1925 aaKnown RBP19.78■□□□□ 0.76
HSPG2-212ENST00000493940 UHRF1BP1Q6BDS2 1440 aa19.78■□□□□ 0.76
HSPG2-212ENST00000493940 ABCC5O15440 1437 aa19.77■□□□□ 0.76
HSPG2-212ENST00000493940 DMRT2Q9Y5R5 561 aa19.77■□□□□ 0.76
HSPG2-212ENST00000493940 PTPRKQ15262 1439 aa19.76■□□□□ 0.75
HSPG2-212ENST00000493940 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
HSPG2-212ENST00000493940 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms