RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
CD46-217ENST00000493796 TMC2Q8TDI7 906 aa10.13□□□□□ -0.79
CD46-217ENST00000493796 PLCB2Q00722 1185 aa10.12□□□□□ -0.79
CD46-217ENST00000493796 CADPS2Q86UW7 1296 aa10.12□□□□□ -0.79
CD46-217ENST00000493796 CRISPLD2Q9H0B8 497 aa10.1□□□□□ -0.79
CD46-217ENST00000493796 GPHNQ9NQX3 736 aaPredicted RBP10.1□□□□□ -0.79
CD46-217ENST00000493796 NCKAP5LQ9HCH0 1330 aa10.09□□□□□ -0.79
CD46-217ENST00000493796 SNPHO15079 494 aa10.09□□□□□ -0.79
CD46-217ENST00000493796 PDE4AP27815 886 aa10.07□□□□□ -0.8
CD46-217ENST00000493796 FOXK1P85037 733 aa10.06□□□□□ -0.8
CD46-217ENST00000493796 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
CD46-217ENST00000493796 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
CD46-217ENST00000493796 DSG2Q14126 1118 aa10.04□□□□□ -0.8
CD46-217ENST00000493796 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
CD46-217ENST00000493796 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
CD46-217ENST00000493796 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
CD46-217ENST00000493796 MFSD10Q14728 455 aa10.02□□□□□ -0.81
CD46-217ENST00000493796 PLPP6Q8IY26 295 aa10.02□□□□□ -0.81
CD46-217ENST00000493796 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
CD46-217ENST00000493796 DDX27Q96GQ7 796 aaKnown RBP10.01□□□□□ -0.81
CD46-217ENST00000493796 LCE2DQ5TA82 110 aaPredicted RBP10□□□□□ -0.81
CD46-217ENST00000493796 ST18O60284 1047 aa9.99□□□□□ -0.81
CD46-217ENST00000493796 RIMBP2O15034 1052 aa9.97□□□□□ -0.81
CD46-217ENST00000493796 SLC34A2O95436 690 aa9.97□□□□□ -0.81
CD46-217ENST00000493796 ZNF710Q8N1W2 664 aa9.97□□□□□ -0.81
CD46-217ENST00000493796 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.82
CD46-217ENST00000493796 ZSWIM6Q9HCJ5 1215 aa9.96□□□□□ -0.82
CD46-217ENST00000493796 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
CD46-217ENST00000493796 GPR153Q6NV75 609 aa9.92□□□□□ -0.82
CD46-217ENST00000493796 PTCD2Q8WV60 388 aaKnown RBP9.92□□□□□ -0.82
CD46-217ENST00000493796 WDR70Q9NW82 654 aa9.91□□□□□ -0.82
CD46-217ENST00000493796 PCDHGA4Q9Y5G9 962 aa9.91□□□□□ -0.82
CD46-217ENST00000493796 ARSIQ5FYB1 569 aa9.9□□□□□ -0.82
CD46-217ENST00000493796 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
CD46-217ENST00000493796 OXER1Q8TDS5 423 aa9.89□□□□□ -0.83
CD46-217ENST00000493796 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
CD46-217ENST00000493796 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
CD46-217ENST00000493796 POTEMA6NI47 508 aa9.87□□□□□ -0.83
CD46-217ENST00000493796 MARVELD3Q96A59 401 aa9.87□□□□□ -0.83
CD46-217ENST00000493796 EMILIN3Q9NT22 766 aa9.87□□□□□ -0.83
CD46-217ENST00000493796 TBC1D12O60347 775 aa9.86□□□□□ -0.83
CD46-217ENST00000493796 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
CD46-217ENST00000493796 EMP3P54852 163 aa9.85□□□□□ -0.83
CD46-217ENST00000493796 E2F4Q16254 413 aa9.85□□□□□ -0.83
CD46-217ENST00000493796 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
CD46-217ENST00000493796 NUDT7P0C024 238 aa9.84□□□□□ -0.83
CD46-217ENST00000493796 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
CD46-217ENST00000493796 KDM2AQ9Y2K7 1162 aa9.82□□□□□ -0.84
CD46-217ENST00000493796 MAP3K9P80192 1104 aa9.81□□□□□ -0.84
CD46-217ENST00000493796 VSIG10Q8N0Z9 540 aa9.81□□□□□ -0.84
CD46-217ENST00000493796 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
CD46-217ENST00000493796 DPYSL4O14531 572 aa9.79□□□□□ -0.84
CD46-217ENST00000493796 ERBB3P21860 1342 aa9.79□□□□□ -0.84
CD46-217ENST00000493796 ZNF316A6NFI3 1004 aaPredicted RBP9.78□□□□□ -0.84
CD46-217ENST00000493796 ARIH1Q9Y4X5 557 aaPredicted RBP9.78□□□□□ -0.84
CD46-217ENST00000493796 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
CD46-217ENST00000493796 EVI5O60447 810 aa9.77□□□□□ -0.85
CD46-217ENST00000493796 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
CD46-217ENST00000493796 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
CD46-217ENST00000493796 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
CD46-217ENST00000493796 KCNV2Q8TDN2 545 aa9.76□□□□□ -0.85
CD46-217ENST00000493796 ANO8Q9HCE9 1232 aaPredicted RBP9.76□□□□□ -0.85
CD46-217ENST00000493796 VARS2Q5ST30 1063 aaKnown RBP9.75□□□□□ -0.85
CD46-217ENST00000493796 P3H3Q8IVL6 736 aa9.73□□□□□ -0.85
CD46-217ENST00000493796 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
CD46-217ENST00000493796 PDIA6Q15084 440 aa9.72□□□□□ -0.85
CD46-217ENST00000493796 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.86
CD46-217ENST00000493796 SPDYE16A6NNV3 312 aaPredicted RBP9.71□□□□□ -0.86
CD46-217ENST00000493796 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
CD46-217ENST00000493796 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
CD46-217ENST00000493796 PTGER2P43116 358 aa9.67□□□□□ -0.86
CD46-217ENST00000493796 FOSBP53539 338 aa9.67□□□□□ -0.86
CD46-217ENST00000493796 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
CD46-217ENST00000493796 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
CD46-217ENST00000493796 JPH4Q96JJ6 628 aa9.67□□□□□ -0.86
CD46-217ENST00000493796 PHF14O94880 888 aa9.64□□□□□ -0.87
CD46-217ENST00000493796 PCDHGA10Q9Y5H3 936 aa9.64□□□□□ -0.87
CD46-217ENST00000493796 SLC24A1O60721 1099 aa9.63□□□□□ -0.87
CD46-217ENST00000493796 DDX12PQ92771 950 aa9.63□□□□□ -0.87
CD46-217ENST00000493796 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
CD46-217ENST00000493796 ZDHHC16Q969W1 377 aa9.61□□□□□ -0.87
CD46-217ENST00000493796 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
CD46-217ENST00000493796 KRTAP3-2Q9BYR7 98 aa9.61□□□□□ -0.87
CD46-217ENST00000493796 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
CD46-217ENST00000493796 PBX2P40425 430 aa9.6□□□□□ -0.87
CD46-217ENST00000493796 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
CD46-217ENST00000493796 EPAS1Q99814 870 aa9.6□□□□□ -0.87
CD46-217ENST00000493796 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
CD46-217ENST00000493796 ADAM33Q9BZ11 813 aa9.59□□□□□ -0.87
CD46-217ENST00000493796 BCL2L12Q9HB09 334 aa9.59□□□□□ -0.87
CD46-217ENST00000493796 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
CD46-217ENST00000493796 NBR1Q14596 966 aa9.58□□□□□ -0.88
CD46-217ENST00000493796 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
CD46-217ENST00000493796 SEMA3EO15041 775 aa9.57□□□□□ -0.88
CD46-217ENST00000493796 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
CD46-217ENST00000493796 MLLT3P42568 568 aaPredicted RBP9.56□□□□□ -0.88
CD46-217ENST00000493796 PSEN2P49810 448 aa9.55□□□□□ -0.88
CD46-217ENST00000493796 OSBPP22059 807 aa9.54□□□□□ -0.88
CD46-217ENST00000493796 PTPREP23469 700 aa9.54□□□□□ -0.88
CD46-217ENST00000493796 EN1Q05925 392 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms