RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
ITGB1-216ENST00000493758 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
ITGB1-216ENST00000493758 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
ITGB1-216ENST00000493758 CADPS2Q86UW7 1296 aa11.46□□□□□ -0.57
ITGB1-216ENST00000493758 MFSD10Q14728 455 aa11.45□□□□□ -0.58
ITGB1-216ENST00000493758 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
ITGB1-216ENST00000493758 TMC2Q8TDI7 906 aa11.44□□□□□ -0.58
ITGB1-216ENST00000493758 C2orf72A6NCS6 295 aa11.43□□□□□ -0.58
ITGB1-216ENST00000493758 FOXK1P85037 733 aa11.42□□□□□ -0.58
ITGB1-216ENST00000493758 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
ITGB1-216ENST00000493758 PDE4AP27815 886 aa11.41□□□□□ -0.58
ITGB1-216ENST00000493758 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
ITGB1-216ENST00000493758 DSG2Q14126 1118 aa11.35□□□□□ -0.59
ITGB1-216ENST00000493758 SNPHO15079 494 aa11.34□□□□□ -0.59
ITGB1-216ENST00000493758 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
ITGB1-216ENST00000493758 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
ITGB1-216ENST00000493758 SLC34A2O95436 690 aa11.33□□□□□ -0.6
ITGB1-216ENST00000493758 LARP6Q9BRS8 491 aaKnown RBP11.33□□□□□ -0.6
ITGB1-216ENST00000493758 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
ITGB1-216ENST00000493758 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
ITGB1-216ENST00000493758 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
ITGB1-216ENST00000493758 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
ITGB1-216ENST00000493758 VSIG10Q8N0Z9 540 aa11.3□□□□□ -0.6
ITGB1-216ENST00000493758 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
ITGB1-216ENST00000493758 PTCD2Q8WV60 388 aaKnown RBP11.25□□□□□ -0.61
ITGB1-216ENST00000493758 ARIH1Q9Y4X5 557 aaPredicted RBP11.25□□□□□ -0.61
ITGB1-216ENST00000493758 RIMBP2O15034 1052 aa11.24□□□□□ -0.61
ITGB1-216ENST00000493758 WDR70Q9NW82 654 aa11.23□□□□□ -0.61
ITGB1-216ENST00000493758 SLC24A1O60721 1099 aa11.22□□□□□ -0.61
ITGB1-216ENST00000493758 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
ITGB1-216ENST00000493758 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
ITGB1-216ENST00000493758 E2F4Q16254 413 aa11.21□□□□□ -0.61
ITGB1-216ENST00000493758 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
ITGB1-216ENST00000493758 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
ITGB1-216ENST00000493758 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
ITGB1-216ENST00000493758 EMILIN3Q9NT22 766 aa11.18□□□□□ -0.62
ITGB1-216ENST00000493758 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
ITGB1-216ENST00000493758 ZNF710Q8N1W2 664 aa11.17□□□□□ -0.62
ITGB1-216ENST00000493758 PCDHGA4Q9Y5G9 962 aa11.17□□□□□ -0.62
ITGB1-216ENST00000493758 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
ITGB1-216ENST00000493758 ST18O60284 1047 aa11.16□□□□□ -0.62
ITGB1-216ENST00000493758 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
ITGB1-216ENST00000493758 TBC1D12O60347 775 aa11.13□□□□□ -0.63
ITGB1-216ENST00000493758 ARHGEF1Q92888 912 aaKnown RBP11.12□□□□□ -0.63
ITGB1-216ENST00000493758 PDIA6Q15084 440 aa11.1□□□□□ -0.63
ITGB1-216ENST00000493758 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
ITGB1-216ENST00000493758 ARSIQ5FYB1 569 aa11.08□□□□□ -0.64
ITGB1-216ENST00000493758 ZNF316A6NFI3 1004 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-216ENST00000493758 SPDYE16A6NNV3 312 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-216ENST00000493758 DPYSL4O14531 572 aa11.07□□□□□ -0.64
ITGB1-216ENST00000493758 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-216ENST00000493758 ANO8Q9HCE9 1232 aaPredicted RBP11.07□□□□□ -0.64
ITGB1-216ENST00000493758 MAP3K9P80192 1104 aa11.05□□□□□ -0.64
ITGB1-216ENST00000493758 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
ITGB1-216ENST00000493758 EVI5O60447 810 aa11.03□□□□□ -0.64
ITGB1-216ENST00000493758 NUDT7P0C024 238 aa11.03□□□□□ -0.64
ITGB1-216ENST00000493758 PTGER2P43116 358 aa11.02□□□□□ -0.65
ITGB1-216ENST00000493758 EMP3P54852 163 aa11.02□□□□□ -0.65
ITGB1-216ENST00000493758 KHSRPQ92945 711 aaKnown RBP eCLIP11.02□□□□□ -0.654e-6■■□□□ 14.1
ITGB1-216ENST00000493758 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
ITGB1-216ENST00000493758 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
ITGB1-216ENST00000493758 LHX6Q9UPM6 363 aa10.97□□□□□ -0.65
ITGB1-216ENST00000493758 FOSBP53539 338 aa10.95□□□□□ -0.66
ITGB1-216ENST00000493758 ERBB3P21860 1342 aa10.93□□□□□ -0.66
ITGB1-216ENST00000493758 PHF14O94880 888 aa10.93□□□□□ -0.66
ITGB1-216ENST00000493758 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
ITGB1-216ENST00000493758 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
ITGB1-216ENST00000493758 POTEMA6NI47 508 aa10.92□□□□□ -0.66
ITGB1-216ENST00000493758 VARS2Q5ST30 1063 aaKnown RBP10.92□□□□□ -0.66
ITGB1-216ENST00000493758 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
ITGB1-216ENST00000493758 EPAS1Q99814 870 aa10.91□□□□□ -0.66
ITGB1-216ENST00000493758 TESPA1A2RU30 521 aaPredicted RBP10.9□□□□□ -0.66
ITGB1-216ENST00000493758 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
ITGB1-216ENST00000493758 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
ITGB1-216ENST00000493758 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
ITGB1-216ENST00000493758 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
ITGB1-216ENST00000493758 ZNF687Q8N1G0 1237 aa10.89□□□□□ -0.67
ITGB1-216ENST00000493758 PCDHGA10Q9Y5H3 936 aa10.89□□□□□ -0.67
ITGB1-216ENST00000493758 PBX2P40425 430 aa10.88□□□□□ -0.67
ITGB1-216ENST00000493758 TYW1BQ6NUM6 668 aa10.88□□□□□ -0.67
ITGB1-216ENST00000493758 ZNF454Q8N9F8 522 aa10.87□□□□□ -0.67
ITGB1-216ENST00000493758 BCL2L12Q9HB09 334 aa10.87□□□□□ -0.67
ITGB1-216ENST00000493758 SEMA3EO15041 775 aa10.86□□□□□ -0.67
ITGB1-216ENST00000493758 ZDHHC16Q969W1 377 aa10.86□□□□□ -0.67
ITGB1-216ENST00000493758 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
ITGB1-216ENST00000493758 EN1Q05925 392 aaPredicted RBP10.84□□□□□ -0.67
ITGB1-216ENST00000493758 DDX12PQ92771 950 aa10.84□□□□□ -0.67
ITGB1-216ENST00000493758 OSBPP22059 807 aa10.83□□□□□ -0.68
ITGB1-216ENST00000493758 MLLT3P42568 568 aaPredicted RBP10.83□□□□□ -0.68
ITGB1-216ENST00000493758 NBR1Q14596 966 aa10.83□□□□□ -0.68
ITGB1-216ENST00000493758 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
ITGB1-216ENST00000493758 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
ITGB1-216ENST00000493758 POTEEQ6S8J3 1075 aa10.79□□□□□ -0.68
ITGB1-216ENST00000493758 GRXCR2A6NFK2 248 aa10.78□□□□□ -0.68
ITGB1-216ENST00000493758 ARHGAP33O14559 1287 aa10.78□□□□□ -0.68
ITGB1-216ENST00000493758 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
ITGB1-216ENST00000493758 PTPREP23469 700 aa10.77□□□□□ -0.69
ITGB1-216ENST00000493758 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
ITGB1-216ENST00000493758 KRTAP3-3Q9BYR6 98 aa10.77□□□□□ -0.69
ITGB1-216ENST00000493758 KRTAP3-2Q9BYR7 98 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms