RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
VPS52-220ENST00000493674 ARAP3Q8WWN8 1544 aa19.38■□□□□ 0.69
VPS52-220ENST00000493674 GLI2P10070 1586 aa19.37■□□□□ 0.69
VPS52-220ENST00000493674 DNMT1P26358 1616 aaKnown RBP19.36■□□□□ 0.69
VPS52-220ENST00000493674 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
VPS52-220ENST00000493674 CAMSAP2Q08AD1 1489 aa19.32■□□□□ 0.68
VPS52-220ENST00000493674 MAP3K4Q9Y6R4 1608 aa19.32■□□□□ 0.68
VPS52-220ENST00000493674 ADGBQ8N7X0 1667 aa19.3■□□□□ 0.68
VPS52-220ENST00000493674 TSPOAP1O95153 1857 aa19.29■□□□□ 0.68
VPS52-220ENST00000493674 ARHGEF5Q12774 1597 aa19.29■□□□□ 0.68
VPS52-220ENST00000493674 GCC2Q8IWJ2 1684 aa19.27■□□□□ 0.67
VPS52-220ENST00000493674 PLCH2O75038 1416 aa19.26■□□□□ 0.67
VPS52-220ENST00000493674 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
VPS52-220ENST00000493674 CFAP74Q9C0B2 1584 aa19.26■□□□□ 0.67
VPS52-220ENST00000493674 PPRC1Q5VV67 1664 aaKnown RBP19.26■□□□□ 0.67
VPS52-220ENST00000493674 ABCC1P33527 1531 aa19.24■□□□□ 0.67
VPS52-220ENST00000493674 FAM69CQ0P6D2 419 aa19.22■□□□□ 0.67
VPS52-220ENST00000493674 PTPRKQ15262 1439 aa19.22■□□□□ 0.67
VPS52-220ENST00000493674 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
VPS52-220ENST00000493674 DAPK1P53355 1430 aa19.2■□□□□ 0.66
VPS52-220ENST00000493674 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
VPS52-220ENST00000493674 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
VPS52-220ENST00000493674 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
VPS52-220ENST00000493674 MAST1Q9Y2H9 1570 aa19.19■□□□□ 0.66
VPS52-220ENST00000493674 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
VPS52-220ENST00000493674 SHANK2Q9UPX8 1470 aa19.19■□□□□ 0.66
VPS52-220ENST00000493674 SYCP2Q9BX26 1530 aa19.19■□□□□ 0.66
VPS52-220ENST00000493674 ABCC5O15440 1437 aa19.18■□□□□ 0.66
VPS52-220ENST00000493674 AKNAQ7Z591 1439 aa19.18■□□□□ 0.66
VPS52-220ENST00000493674 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
VPS52-220ENST00000493674 ZNF644Q9H582 1327 aaPredicted RBP19.17■□□□□ 0.66
VPS52-220ENST00000493674 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
VPS52-220ENST00000493674 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
VPS52-220ENST00000493674 FANCAO15360 1455 aa19.15■□□□□ 0.66
VPS52-220ENST00000493674 ARHGEF12Q9NZN5 1544 aa19.15■□□□□ 0.66
VPS52-220ENST00000493674 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
VPS52-220ENST00000493674 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
VPS52-220ENST00000493674 KDM6BO15054 1643 aa19.13■□□□□ 0.65
VPS52-220ENST00000493674 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
VPS52-220ENST00000493674 HFM1A2PYH4 1435 aa19.11■□□□□ 0.65
VPS52-220ENST00000493674 ROCK1Q13464 1354 aa19.11■□□□□ 0.65
VPS52-220ENST00000493674 NEO1Q92859 1461 aa19.1■□□□□ 0.65
VPS52-220ENST00000493674 RICTORQ6R327 1708 aa19.09■□□□□ 0.65
VPS52-220ENST00000493674 EFCAB2Q5VUJ9 269 aa19.09■□□□□ 0.65
VPS52-220ENST00000493674 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
VPS52-220ENST00000493674 NAIPQ13075 1403 aa19.08■□□□□ 0.64
VPS52-220ENST00000493674 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
VPS52-220ENST00000493674 ADGRL1O94910 1474 aa19.06■□□□□ 0.64
VPS52-220ENST00000493674 ITGAEP38570 1179 aa19.06■□□□□ 0.64
VPS52-220ENST00000493674 SETD5Q9C0A6 1442 aa19.06■□□□□ 0.64
VPS52-220ENST00000493674 KDM5CP41229 1560 aa19.06■□□□□ 0.64
VPS52-220ENST00000493674 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
VPS52-220ENST00000493674 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
VPS52-220ENST00000493674 RSPH4AQ5TD94 716 aa19.03■□□□□ 0.64
VPS52-220ENST00000493674 KIDINS220Q9ULH0 1771 aa19.03■□□□□ 0.64
VPS52-220ENST00000493674 NCOA1Q15788 1441 aa19.02■□□□□ 0.64
VPS52-220ENST00000493674 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
VPS52-220ENST00000493674 RAB3GAP2Q9H2M9 1393 aa19.02■□□□□ 0.64
VPS52-220ENST00000493674 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
VPS52-220ENST00000493674 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
VPS52-220ENST00000493674 ATP7AQ04656 1500 aa18.99■□□□□ 0.63
VPS52-220ENST00000493674 POGZQ7Z3K3 1410 aa18.99■□□□□ 0.63
VPS52-220ENST00000493674 HECW2Q9P2P5 1572 aa18.98■□□□□ 0.63
VPS52-220ENST00000493674 HRCP23327 699 aa18.98■□□□□ 0.63
VPS52-220ENST00000493674 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
VPS52-220ENST00000493674 SCAPERQ9BY12 1400 aa18.98■□□□□ 0.63
VPS52-220ENST00000493674 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
VPS52-220ENST00000493674 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
VPS52-220ENST00000493674 ZMYM4Q5VZL5 1548 aa18.95■□□□□ 0.62
VPS52-220ENST00000493674 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
VPS52-220ENST00000493674 BCORL1Q5H9F3 1711 aa18.93■□□□□ 0.62
VPS52-220ENST00000493674 DUOX2Q9NRD8 1548 aa18.93■□□□□ 0.62
VPS52-220ENST00000493674 UNC13BO14795 1591 aa18.93■□□□□ 0.62
VPS52-220ENST00000493674 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
VPS52-220ENST00000493674 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
VPS52-220ENST00000493674 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
VPS52-220ENST00000493674 MLH3Q9UHC1 1453 aa18.91■□□□□ 0.62
VPS52-220ENST00000493674 TSPY4P0CV99 314 aa18.91■□□□□ 0.62
VPS52-220ENST00000493674 TSPY10P0CW01 314 aa18.91■□□□□ 0.62
VPS52-220ENST00000493674 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
VPS52-220ENST00000493674 DEPDC5O75140 1603 aa18.91■□□□□ 0.62
VPS52-220ENST00000493674 KIF15Q9NS87 1388 aa18.9■□□□□ 0.62
VPS52-220ENST00000493674 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
VPS52-220ENST00000493674 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
VPS52-220ENST00000493674 COL17A1Q9UMD9 1497 aaPredicted RBP18.89■□□□□ 0.61
VPS52-220ENST00000493674 ANKRD50Q9ULJ7 1429 aa18.88■□□□□ 0.61
VPS52-220ENST00000493674 DIP2CQ9Y2E4 1556 aa18.87■□□□□ 0.61
VPS52-220ENST00000493674 MAGI2Q86UL8 1455 aa18.86■□□□□ 0.61
VPS52-220ENST00000493674 ERBINQ96RT1 1412 aa18.86■□□□□ 0.61
VPS52-220ENST00000493674 SPAG9O60271 1321 aaKnown RBP18.85■□□□□ 0.61
VPS52-220ENST00000493674 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
VPS52-220ENST00000493674 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
VPS52-220ENST00000493674 IQGAP3Q86VI3 1631 aa18.84■□□□□ 0.61
VPS52-220ENST00000493674 RNF17Q9BXT8 1623 aaKnown RBP18.84■□□□□ 0.61
VPS52-220ENST00000493674 REREQ9P2R6 1566 aa18.81■□□□□ 0.6
VPS52-220ENST00000493674 MROH1Q8NDA8 1641 aa18.81■□□□□ 0.6
VPS52-220ENST00000493674 PZPP20742 1482 aa18.8■□□□□ 0.6
VPS52-220ENST00000493674 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
VPS52-220ENST00000493674 CLSPNQ9HAW4 1339 aa18.78■□□□□ 0.6
VPS52-220ENST00000493674 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms