RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
NUDCD3-210ENST00000493613 CDC42BPBQ9Y5S2 1711 aa16.93■□□□□ 0.3
NUDCD3-210ENST00000493613 MAGI2Q86UL8 1455 aa16.93■□□□□ 0.3
NUDCD3-210ENST00000493613 POGZQ7Z3K3 1410 aa16.92■□□□□ 0.3
NUDCD3-210ENST00000493613 YEATS2Q9ULM3 1422 aa16.92■□□□□ 0.3
NUDCD3-210ENST00000493613 PCF11O94913 1555 aaKnown RBP16.92■□□□□ 0.3
NUDCD3-210ENST00000493613 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
NUDCD3-210ENST00000493613 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-210ENST00000493613 TROQ12816 1431 aaPredicted RBP16.89■□□□□ 0.29
NUDCD3-210ENST00000493613 ARHGAP5Q13017 1502 aa16.89■□□□□ 0.29
NUDCD3-210ENST00000493613 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
NUDCD3-210ENST00000493613 CLIP1P30622 1438 aa16.88■□□□□ 0.29
NUDCD3-210ENST00000493613 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
NUDCD3-210ENST00000493613 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
NUDCD3-210ENST00000493613 CCDC18Q5T9S5 1454 aa16.86■□□□□ 0.29
NUDCD3-210ENST00000493613 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
NUDCD3-210ENST00000493613 ZNF518AQ6AHZ1 1483 aa16.85■□□□□ 0.29
NUDCD3-210ENST00000493613 KDM5CP41229 1560 aa16.85■□□□□ 0.29
NUDCD3-210ENST00000493613 ITSN2Q9NZM3 1697 aa16.85■□□□□ 0.29
NUDCD3-210ENST00000493613 ATP10AO60312 1499 aa16.84■□□□□ 0.29
NUDCD3-210ENST00000493613 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
NUDCD3-210ENST00000493613 C9orf84Q5VXU9 1444 aa16.82■□□□□ 0.28
NUDCD3-210ENST00000493613 PREX1Q8TCU6 1659 aa16.81■□□□□ 0.28
NUDCD3-210ENST00000493613 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
NUDCD3-210ENST00000493613 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
NUDCD3-210ENST00000493613 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
NUDCD3-210ENST00000493613 FYCO1Q9BQS8 1478 aa16.8■□□□□ 0.28
NUDCD3-210ENST00000493613 MLECQ14165 292 aa16.8■□□□□ 0.28
NUDCD3-210ENST00000493613 ABCC1P33527 1531 aa16.8■□□□□ 0.28
NUDCD3-210ENST00000493613 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
NUDCD3-210ENST00000493613 REREQ9P2R6 1566 aa16.77■□□□□ 0.28
NUDCD3-210ENST00000493613 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
NUDCD3-210ENST00000493613 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
NUDCD3-210ENST00000493613 C3P01024 1663 aa16.74■□□□□ 0.27
NUDCD3-210ENST00000493613 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
NUDCD3-210ENST00000493613 MYT1LQ9UL68 1186 aa16.73■□□□□ 0.27
NUDCD3-210ENST00000493613 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
NUDCD3-210ENST00000493613 HSPA2P54652 639 aa16.71■□□□□ 0.27
NUDCD3-210ENST00000493613 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
NUDCD3-210ENST00000493613 SETD1BQ9UPS6 1966 aaKnown RBP16.7■□□□□ 0.26
NUDCD3-210ENST00000493613 FBXO41Q8TF61 875 aa16.69■□□□□ 0.26
NUDCD3-210ENST00000493613 AGLP35573 1532 aa16.68■□□□□ 0.26
NUDCD3-210ENST00000493613 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
NUDCD3-210ENST00000493613 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
NUDCD3-210ENST00000493613 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
NUDCD3-210ENST00000493613 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
NUDCD3-210ENST00000493613 CEBPAP49715 358 aaPredicted RBP16.65■□□□□ 0.26
NUDCD3-210ENST00000493613 MROH2AA6NES4 1674 aa16.65■□□□□ 0.26
NUDCD3-210ENST00000493613 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
NUDCD3-210ENST00000493613 ZNF777Q9ULD5 760 aaPredicted RBP16.63■□□□□ 0.25
NUDCD3-210ENST00000493613 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
NUDCD3-210ENST00000493613 UHRF1BP1Q6BDS2 1440 aa16.62■□□□□ 0.25
NUDCD3-210ENST00000493613 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
NUDCD3-210ENST00000493613 TIAM1Q13009 1591 aa16.6■□□□□ 0.25
NUDCD3-210ENST00000493613 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
NUDCD3-210ENST00000493613 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
NUDCD3-210ENST00000493613 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
NUDCD3-210ENST00000493613 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
NUDCD3-210ENST00000493613 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
NUDCD3-210ENST00000493613 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
NUDCD3-210ENST00000493613 PLXNC1O60486 1568 aa16.58■□□□□ 0.24
NUDCD3-210ENST00000493613 HNRNPMP52272 730 aaKnown RBP eCLIP16.57■□□□□ 0.243e-6■■■□□ 19
NUDCD3-210ENST00000493613 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
NUDCD3-210ENST00000493613 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
NUDCD3-210ENST00000493613 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
NUDCD3-210ENST00000493613 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
NUDCD3-210ENST00000493613 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
NUDCD3-210ENST00000493613 A2MP01023 1474 aa16.53■□□□□ 0.24
NUDCD3-210ENST00000493613 CERKQ8TCT0 537 aa16.52■□□□□ 0.24
NUDCD3-210ENST00000493613 ZNF142P52746 1687 aaPredicted RBP16.52■□□□□ 0.23
NUDCD3-210ENST00000493613 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
NUDCD3-210ENST00000493613 MYO3AQ8NEV4 1616 aa16.51■□□□□ 0.23
NUDCD3-210ENST00000493613 NPATQ14207 1427 aa16.49■□□□□ 0.23
NUDCD3-210ENST00000493613 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
NUDCD3-210ENST00000493613 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
NUDCD3-210ENST00000493613 CAMSAP1Q5T5Y3 1602 aa16.47■□□□□ 0.23
NUDCD3-210ENST00000493613 ZMYM3Q14202 1370 aa16.46■□□□□ 0.23
NUDCD3-210ENST00000493613 NCOA2Q15596 1464 aa16.46■□□□□ 0.23
NUDCD3-210ENST00000493613 PTPRTO14522 1441 aa16.45■□□□□ 0.22
NUDCD3-210ENST00000493613 CAMSAP2Q08AD1 1489 aa16.45■□□□□ 0.22
NUDCD3-210ENST00000493613 NCOA1Q15788 1441 aa16.45■□□□□ 0.22
NUDCD3-210ENST00000493613 CEP170BQ9Y4F5 1589 aaPredicted RBP16.44■□□□□ 0.22
NUDCD3-210ENST00000493613 RTEL1-TNFRSF6BF6WH68 1400 aa16.44■□□□□ 0.22
NUDCD3-210ENST00000493613 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
NUDCD3-210ENST00000493613 GGT6Q6P531 493 aa16.42■□□□□ 0.22
NUDCD3-210ENST00000493613 ARHGEF5Q12774 1597 aa16.41■□□□□ 0.22
NUDCD3-210ENST00000493613 LTBP4Q8N2S1 1624 aa16.41■□□□□ 0.22
NUDCD3-210ENST00000493613 PTPRKQ15262 1439 aa16.4■□□□□ 0.22
NUDCD3-210ENST00000493613 POLR1AO95602 1720 aaPredicted RBP16.39■□□□□ 0.21
NUDCD3-210ENST00000493613 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
NUDCD3-210ENST00000493613 DHX29Q7Z478 1369 aaKnown RBP16.38■□□□□ 0.21
NUDCD3-210ENST00000493613 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
NUDCD3-210ENST00000493613 KDM5DQ9BY66 1539 aa16.37■□□□□ 0.21
NUDCD3-210ENST00000493613 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
NUDCD3-210ENST00000493613 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
NUDCD3-210ENST00000493613 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
NUDCD3-210ENST00000493613 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
NUDCD3-210ENST00000493613 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
NUDCD3-210ENST00000493613 MAST1Q9Y2H9 1570 aa16.34■□□□□ 0.21
NUDCD3-210ENST00000493613 ZC3H13Q5T200 1668 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms