RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 SCAPERQ9BY12 1400 aa21.94■■□□□ 1.1
PDCD11-206ENST00000493610 ARHGAP5Q13017 1502 aa21.93■■□□□ 1.1
PDCD11-206ENST00000493610 VPS8Q8N3P4 1428 aa21.93■■□□□ 1.1
PDCD11-206ENST00000493610 POGZQ7Z3K3 1410 aa21.92■■□□□ 1.1
PDCD11-206ENST00000493610 EFCAB2Q5VUJ9 269 aa21.92■■□□□ 1.1
PDCD11-206ENST00000493610 ARHGEF12Q9NZN5 1544 aa21.91■■□□□ 1.1
PDCD11-206ENST00000493610 SIGLEC1Q9BZZ2 1709 aa21.91■■□□□ 1.1
PDCD11-206ENST00000493610 ARHGEF40Q8TER5 1519 aa21.9■■□□□ 1.1
PDCD11-206ENST00000493610 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
PDCD11-206ENST00000493610 YEATS2Q9ULM3 1422 aa21.89■■□□□ 1.1
PDCD11-206ENST00000493610 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
PDCD11-206ENST00000493610 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
PDCD11-206ENST00000493610 ABCC1P33527 1531 aa21.87■■□□□ 1.09
PDCD11-206ENST00000493610 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
PDCD11-206ENST00000493610 KDM5CP41229 1560 aa21.86■■□□□ 1.09
PDCD11-206ENST00000493610 SAMD9LQ8IVG5 1584 aa21.85■■□□□ 1.09
PDCD11-206ENST00000493610 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
PDCD11-206ENST00000493610 ITSN2Q9NZM3 1697 aa21.84■■□□□ 1.09
PDCD11-206ENST00000493610 TRAPPC8Q9Y2L5 1435 aa21.83■■□□□ 1.09
PDCD11-206ENST00000493610 ZFYVE16Q7Z3T8 1539 aa21.83■■□□□ 1.09
PDCD11-206ENST00000493610 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.08
PDCD11-206ENST00000493610 ADAMTSL3P82987 1691 aa21.82■■□□□ 1.08
PDCD11-206ENST00000493610 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
PDCD11-206ENST00000493610 ZNF518AQ6AHZ1 1483 aa21.8■■□□□ 1.08
PDCD11-206ENST00000493610 BCORL1Q5H9F3 1711 aa21.79■■□□□ 1.08
PDCD11-206ENST00000493610 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
PDCD11-206ENST00000493610 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
PDCD11-206ENST00000493610 NCOA2Q15596 1464 aa21.77■■□□□ 1.07
PDCD11-206ENST00000493610 CCNB3Q8WWL7 1395 aa21.76■■□□□ 1.07
PDCD11-206ENST00000493610 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
PDCD11-206ENST00000493610 SYCP2Q9BX26 1530 aa21.75■■□□□ 1.07
PDCD11-206ENST00000493610 HECW2Q9P2P5 1572 aa21.75■■□□□ 1.07
PDCD11-206ENST00000493610 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
PDCD11-206ENST00000493610 MLH3Q9UHC1 1453 aa21.74■■□□□ 1.07
PDCD11-206ENST00000493610 KIDINS220Q9ULH0 1771 aa21.74■■□□□ 1.07
PDCD11-206ENST00000493610 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
PDCD11-206ENST00000493610 ABCA6Q8N139 1617 aa21.73■■□□□ 1.07
PDCD11-206ENST00000493610 KIAA1107Q9UPP5 1409 aa21.72■■□□□ 1.07
PDCD11-206ENST00000493610 ATP10AO60312 1499 aa21.72■■□□□ 1.07
PDCD11-206ENST00000493610 ZNF644Q9H582 1327 aaPredicted RBP21.72■■□□□ 1.07
PDCD11-206ENST00000493610 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
PDCD11-206ENST00000493610 MADDQ8WXG6 1647 aa21.7■■□□□ 1.06
PDCD11-206ENST00000493610 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
PDCD11-206ENST00000493610 MBD5Q9P267 1494 aa21.7■■□□□ 1.06
PDCD11-206ENST00000493610 HNRNPMP52272 730 aaKnown RBP eCLIP21.69■■□□□ 1.06
PDCD11-206ENST00000493610 C9orf84Q5VXU9 1444 aa21.69■■□□□ 1.06
PDCD11-206ENST00000493610 REREQ9P2R6 1566 aa21.68■■□□□ 1.06
PDCD11-206ENST00000493610 PLEKHH2Q8IVE3 1493 aa21.66■■□□□ 1.06
PDCD11-206ENST00000493610 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PDCD11-206ENST00000493610 PTPRMP28827 1452 aa21.64■■□□□ 1.06
PDCD11-206ENST00000493610 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
PDCD11-206ENST00000493610 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
PDCD11-206ENST00000493610 CAMSAP2Q08AD1 1489 aa21.61■■□□□ 1.05
PDCD11-206ENST00000493610 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
PDCD11-206ENST00000493610 AGLP35573 1532 aa21.6■■□□□ 1.05
PDCD11-206ENST00000493610 SPAG9O60271 1321 aaKnown RBP21.56■■□□□ 1.04
PDCD11-206ENST00000493610 FER1L4A9Z1Z3 1794 aa21.56■■□□□ 1.04
PDCD11-206ENST00000493610 PLXNC1O60486 1568 aa21.56■■□□□ 1.04
PDCD11-206ENST00000493610 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
PDCD11-206ENST00000493610 MLECQ14165 292 aa21.55■■□□□ 1.04
PDCD11-206ENST00000493610 ARHGEF5Q12774 1597 aa21.54■■□□□ 1.04
PDCD11-206ENST00000493610 MYT1LQ9UL68 1186 aa21.52■■□□□ 1.04
PDCD11-206ENST00000493610 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
PDCD11-206ENST00000493610 CCDC141Q6ZP82 1450 aa21.52■■□□□ 1.03
PDCD11-206ENST00000493610 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
PDCD11-206ENST00000493610 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
PDCD11-206ENST00000493610 A2MP01023 1474 aa21.49■■□□□ 1.03
PDCD11-206ENST00000493610 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
PDCD11-206ENST00000493610 APLP2Q06481 763 aa21.44■■□□□ 1.02
PDCD11-206ENST00000493610 PTPN23Q9H3S7 1636 aa21.44■■□□□ 1.02
PDCD11-206ENST00000493610 RSPH4AQ5TD94 716 aa21.43■■□□□ 1.02
PDCD11-206ENST00000493610 TCOF1Q13428 1488 aaKnown RBP21.43■■□□□ 1.02
PDCD11-206ENST00000493610 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
PDCD11-206ENST00000493610 LMTK3Q96Q04 1460 aa21.42■■□□□ 1.02
PDCD11-206ENST00000493610 C3P01024 1663 aa21.4■■□□□ 1.02
PDCD11-206ENST00000493610 DHX29Q7Z478 1369 aaKnown RBP21.4■■□□□ 1.02
PDCD11-206ENST00000493610 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
PDCD11-206ENST00000493610 ABCC5O15440 1437 aa21.38■■□□□ 1.01
PDCD11-206ENST00000493610 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
PDCD11-206ENST00000493610 DNMT1P26358 1616 aaKnown RBP21.36■■□□□ 1.01
PDCD11-206ENST00000493610 MROH2AA6NES4 1674 aa21.35■■□□□ 1.01
PDCD11-206ENST00000493610 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
PDCD11-206ENST00000493610 CLTCQ00610 1675 aaKnown RBP21.34■■□□□ 1.01
PDCD11-206ENST00000493610 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
PDCD11-206ENST00000493610 DAPK1P53355 1430 aa21.32■■□□□ 1
PDCD11-206ENST00000493610 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
PDCD11-206ENST00000493610 TSPY4P0CV99 314 aa21.32■■□□□ 1
PDCD11-206ENST00000493610 TSPY10P0CW01 314 aa21.32■■□□□ 1
PDCD11-206ENST00000493610 PREX1Q8TCU6 1659 aa21.3■■□□□ 1
PDCD11-206ENST00000493610 GGT6Q6P531 493 aa21.29■■□□□ 1
PDCD11-206ENST00000493610 ZMYM3Q14202 1370 aa21.28■■□□□ 1
PDCD11-206ENST00000493610 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
PDCD11-206ENST00000493610 RNF17Q9BXT8 1623 aaKnown RBP21.27■■□□□ 1
PDCD11-206ENST00000493610 KIF3BO15066 747 aa21.27■■□□□ 1
PDCD11-206ENST00000493610 HSPA2P54652 639 aa21.26■□□□□ 0.99
PDCD11-206ENST00000493610 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
PDCD11-206ENST00000493610 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
PDCD11-206ENST00000493610 EIF2AK4Q9P2K8 1649 aaKnown RBP21.25■□□□□ 0.99
PDCD11-206ENST00000493610 PTPRKQ15262 1439 aa21.24■□□□□ 0.99
PDCD11-206ENST00000493610 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms