RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
SYCP1-208ENST00000493377 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
SYCP1-208ENST00000493377 ADGRD1Q6QNK2 874 aa13.53□□□□□ -0.24
SYCP1-208ENST00000493377 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
SYCP1-208ENST00000493377 AXIN2Q9Y2T1 843 aa13.52□□□□□ -0.25
SYCP1-208ENST00000493377 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
SYCP1-208ENST00000493377 NUDT7P0C024 238 aa13.43□□□□□ -0.26
SYCP1-208ENST00000493377 TK2O00142 265 aa13.42□□□□□ -0.26
SYCP1-208ENST00000493377 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
SYCP1-208ENST00000493377 ARHGAP33O14559 1287 aa13.41□□□□□ -0.26
SYCP1-208ENST00000493377 SOX12O15370 315 aa13.4□□□□□ -0.26
SYCP1-208ENST00000493377 HRO43593 1189 aa13.38□□□□□ -0.27
SYCP1-208ENST00000493377 VASPP50552 380 aaPredicted RBP13.38□□□□□ -0.27
SYCP1-208ENST00000493377 FKBP8Q14318 412 aa13.38□□□□□ -0.27
SYCP1-208ENST00000493377 KCTD12Q96CX2 325 aaKnown RBP13.37□□□□□ -0.27
SYCP1-208ENST00000493377 MS4A4AQ96JQ5 239 aa13.37□□□□□ -0.27
SYCP1-208ENST00000493377 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.28
SYCP1-208ENST00000493377 CIZ1Q9ULV3 898 aaPredicted RBP13.33□□□□□ -0.28
SYCP1-208ENST00000493377 A0A0G2JS52 829 aa13.32□□□□□ -0.28
SYCP1-208ENST00000493377 SLC34A2O95436 690 aa13.28□□□□□ -0.28
SYCP1-208ENST00000493377 PCDHGA4Q9Y5G9 962 aa13.28□□□□□ -0.28
SYCP1-208ENST00000493377 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
SYCP1-208ENST00000493377 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
SYCP1-208ENST00000493377 KIF3CO14782 793 aa13.24□□□□□ -0.29
SYCP1-208ENST00000493377 Q6ZNB5 142 aa13.24□□□□□ -0.29
SYCP1-208ENST00000493377 SPOCK2Q92563 424 aa13.23□□□□□ -0.29
SYCP1-208ENST00000493377 DMRTA1Q5VZB9 504 aa13.22□□□□□ -0.29
SYCP1-208ENST00000493377 PTPN5P54829 565 aa13.2□□□□□ -0.3
SYCP1-208ENST00000493377 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
SYCP1-208ENST00000493377 PSEN2P49810 448 aa13.18□□□□□ -0.3
SYCP1-208ENST00000493377 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
SYCP1-208ENST00000493377 NLRP6P59044 892 aa13.11□□□□□ -0.31
SYCP1-208ENST00000493377 KCNH8Q96L42 1107 aa13.07□□□□□ -0.32
SYCP1-208ENST00000493377 KDM4FA0A1W2PPD8 638 aa13.06□□□□□ -0.32
SYCP1-208ENST00000493377 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
SYCP1-208ENST00000493377 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
SYCP1-208ENST00000493377 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.04□□□□□ -0.32
SYCP1-208ENST00000493377 FBXO22Q8NEZ5 403 aa13.04□□□□□ -0.32
SYCP1-208ENST00000493377 ZFP91Q96JP5 570 aaPredicted RBP13.04□□□□□ -0.32
SYCP1-208ENST00000493377 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
SYCP1-208ENST00000493377 LAPTM4AQ15012 233 aa13.02□□□□□ -0.33
SYCP1-208ENST00000493377 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.33
SYCP1-208ENST00000493377 VGFO15240 615 aaPredicted RBP13□□□□□ -0.33
SYCP1-208ENST00000493377 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
SYCP1-208ENST00000493377 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
SYCP1-208ENST00000493377 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
SYCP1-208ENST00000493377 PTCD2Q8WV60 388 aaKnown RBP12.95□□□□□ -0.34
SYCP1-208ENST00000493377 SLC4A5Q9BY07 1137 aa12.94□□□□□ -0.34
SYCP1-208ENST00000493377 GOLGA8CPA6NN73 597 aa12.92□□□□□ -0.34
SYCP1-208ENST00000493377 ITGBL1O95965 494 aaPredicted RBP12.92□□□□□ -0.34
SYCP1-208ENST00000493377 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
SYCP1-208ENST00000493377 WNT2BQ93097 391 aa12.92□□□□□ -0.34
SYCP1-208ENST00000493377 LCE2BO14633 110 aa12.91□□□□□ -0.34
SYCP1-208ENST00000493377 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
SYCP1-208ENST00000493377 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
SYCP1-208ENST00000493377 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
SYCP1-208ENST00000493377 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
SYCP1-208ENST00000493377 TBC1D12O60347 775 aa12.8□□□□□ -0.36
SYCP1-208ENST00000493377 GFRA3O60609 400 aa12.78□□□□□ -0.36
SYCP1-208ENST00000493377 BCL11BQ9C0K0 894 aaPredicted RBP12.78□□□□□ -0.36
SYCP1-208ENST00000493377 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.37
SYCP1-208ENST00000493377 NBPF3Q9H094 633 aa12.76□□□□□ -0.37
SYCP1-208ENST00000493377 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
SYCP1-208ENST00000493377 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
SYCP1-208ENST00000493377 STK24Q9Y6E0 443 aa12.7□□□□□ -0.38
SYCP1-208ENST00000493377 NRG2O14511 850 aaPredicted RBP12.69□□□□□ -0.38
SYCP1-208ENST00000493377 PTPREP23469 700 aa12.69□□□□□ -0.38
SYCP1-208ENST00000493377 FOXK1P85037 733 aa12.69□□□□□ -0.38
SYCP1-208ENST00000493377 ZNF787Q6DD87 383 aa12.69□□□□□ -0.38
SYCP1-208ENST00000493377 NYAP1Q6ZVC0 841 aa12.69□□□□□ -0.38
SYCP1-208ENST00000493377 KCNC4Q03721 635 aa12.68□□□□□ -0.38
SYCP1-208ENST00000493377 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
SYCP1-208ENST00000493377 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
SYCP1-208ENST00000493377 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
SYCP1-208ENST00000493377 ZNF775Q96BV0 537 aaPredicted RBP12.66□□□□□ -0.38
SYCP1-208ENST00000493377 FOSBP53539 338 aa12.57□□□□□ -0.4
SYCP1-208ENST00000493377 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
SYCP1-208ENST00000493377 STK25O00506 426 aa12.55□□□□□ -0.4
SYCP1-208ENST00000493377 SOWAHBA6NEL2 793 aa12.54□□□□□ -0.4
SYCP1-208ENST00000493377 BCAMP50895 628 aa12.54□□□□□ -0.4
SYCP1-208ENST00000493377 DSG2Q14126 1118 aa12.52□□□□□ -0.41
SYCP1-208ENST00000493377 OXER1Q8TDS5 423 aa12.52□□□□□ -0.41
SYCP1-208ENST00000493377 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
SYCP1-208ENST00000493377 PPP1R37O75864 691 aa12.49□□□□□ -0.41
SYCP1-208ENST00000493377 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
SYCP1-208ENST00000493377 JPH4Q96JJ6 628 aa12.48□□□□□ -0.41
SYCP1-208ENST00000493377 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
SYCP1-208ENST00000493377 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
SYCP1-208ENST00000493377 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
SYCP1-208ENST00000493377 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.41
SYCP1-208ENST00000493377 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
SYCP1-208ENST00000493377 PPP1R3GB7ZBB8 358 aa12.42□□□□□ -0.42
SYCP1-208ENST00000493377 UPF1Q92900 1129 aaKnown RBP eCLIP12.41□□□□□ -0.42
SYCP1-208ENST00000493377 ZFRQ96KR1 1074 aaKnown RBP12.4□□□□□ -0.42
SYCP1-208ENST00000493377 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
SYCP1-208ENST00000493377 PDZRN3Q9UPQ7 1066 aa12.38□□□□□ -0.43
SYCP1-208ENST00000493377 PROX2Q3B8N5 592 aa12.36□□□□□ -0.43
SYCP1-208ENST00000493377 TSR3Q9UJK0 312 aaKnown RBP12.35□□□□□ -0.43
SYCP1-208ENST00000493377 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
SYCP1-208ENST00000493377 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms