RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 POGZQ7Z3K3 1410 aa36.14■■■■□ 3.38
LYSMD4-208ENST00000493256 PTPRMP28827 1452 aa36.13■■■■□ 3.37
LYSMD4-208ENST00000493256 ZFYVE16Q7Z3T8 1539 aa36.13■■■■□ 3.37
LYSMD4-208ENST00000493256 YEATS2Q9ULM3 1422 aa36.12■■■■□ 3.37
LYSMD4-208ENST00000493256 EFCAB2Q5VUJ9 269 aa36.12■■■■□ 3.37
LYSMD4-208ENST00000493256 CCDC18Q5T9S5 1454 aa36.11■■■■□ 3.37
LYSMD4-208ENST00000493256 MAGI2Q86UL8 1455 aa36.11■■■■□ 3.37
LYSMD4-208ENST00000493256 MADDQ8WXG6 1647 aa36.1■■■■□ 3.37
LYSMD4-208ENST00000493256 ARHGAP5Q13017 1502 aa36.05■■■■□ 3.36
LYSMD4-208ENST00000493256 FYCO1Q9BQS8 1478 aa36.05■■■■□ 3.36
LYSMD4-208ENST00000493256 SIGLEC1Q9BZZ2 1709 aa36.04■■■■□ 3.36
LYSMD4-208ENST00000493256 CDC42BPBQ9Y5S2 1711 aa35.98■■■■□ 3.35
LYSMD4-208ENST00000493256 RIMS1Q86UR5 1692 aaKnown RBP35.97■■■■□ 3.35
LYSMD4-208ENST00000493256 ZNF518AQ6AHZ1 1483 aa35.95■■■■□ 3.35
LYSMD4-208ENST00000493256 PREX2Q70Z35 1606 aa35.94■■■■□ 3.34
LYSMD4-208ENST00000493256 ATP10AO60312 1499 aa35.92■■■■□ 3.34
LYSMD4-208ENST00000493256 KDM5CP41229 1560 aa35.91■■■■□ 3.34
LYSMD4-208ENST00000493256 AFAP1Q8N556 730 aa35.89■■■■□ 3.34
LYSMD4-208ENST00000493256 C9orf84Q5VXU9 1444 aa35.88■■■■□ 3.33
LYSMD4-208ENST00000493256 MLECQ14165 292 aa35.85■■■■□ 3.33
LYSMD4-208ENST00000493256 CDC42BPAQ5VT25 1732 aa35.85■■■■□ 3.33
LYSMD4-208ENST00000493256 ABCC1P33527 1531 aa35.84■■■■□ 3.33
LYSMD4-208ENST00000493256 ARHGEF12Q9NZN5 1544 aa35.82■■■■□ 3.32
LYSMD4-208ENST00000493256 FER1L4A9Z1Z3 1794 aa35.8■■■■□ 3.32
LYSMD4-208ENST00000493256 ITSN2Q9NZM3 1697 aa35.79■■■■□ 3.32
LYSMD4-208ENST00000493256 TRAPPC8Q9Y2L5 1435 aa35.79■■■■□ 3.32
LYSMD4-208ENST00000493256 LMTK3Q96Q04 1460 aa35.78■■■■□ 3.32
LYSMD4-208ENST00000493256 DIP2CQ9Y2E4 1556 aa35.77■■■■□ 3.32
LYSMD4-208ENST00000493256 MLH3Q9UHC1 1453 aa35.76■■■■□ 3.32
LYSMD4-208ENST00000493256 MYT1LQ9UL68 1186 aa35.76■■■■□ 3.32
LYSMD4-208ENST00000493256 PLPPR3Q6T4P5 718 aa35.75■■■■□ 3.31
LYSMD4-208ENST00000493256 GPATCH8Q9UKJ3 1502 aaKnown RBP35.73■■■■□ 3.31
LYSMD4-208ENST00000493256 ABCA6Q8N139 1617 aa35.73■■■■□ 3.31
LYSMD4-208ENST00000493256 CEP162Q5TB80 1403 aa35.73■■■■□ 3.31
LYSMD4-208ENST00000493256 ILDR1Q86SU0 546 aaPredicted RBP35.71■■■■□ 3.31
LYSMD4-208ENST00000493256 REREQ9P2R6 1566 aa35.7■■■■□ 3.31
LYSMD4-208ENST00000493256 SAMD9LQ8IVG5 1584 aa35.69■■■■□ 3.3
LYSMD4-208ENST00000493256 ZNF777Q9ULD5 760 aaPredicted RBP35.67■■■■□ 3.3
LYSMD4-208ENST00000493256 MTUS2Q5JR59 1369 aa35.66■■■■□ 3.3
LYSMD4-208ENST00000493256 KIDINS220Q9ULH0 1771 aa35.64■■■■□ 3.3
LYSMD4-208ENST00000493256 SYCP2Q9BX26 1530 aa35.63■■■■□ 3.29
LYSMD4-208ENST00000493256 CCNB3Q8WWL7 1395 aa35.62■■■■□ 3.29
LYSMD4-208ENST00000493256 AGLP35573 1532 aa35.58■■■■□ 3.29
LYSMD4-208ENST00000493256 CFDP1Q9UEE9 299 aaPredicted RBP35.58■■■■□ 3.29
LYSMD4-208ENST00000493256 HSPA2P54652 639 aa35.57■■■■□ 3.28
LYSMD4-208ENST00000493256 EHBP1L1Q8N3D4 1523 aa35.57■■■■□ 3.28
LYSMD4-208ENST00000493256 HNRNPMP52272 730 aaKnown RBP eCLIP35.56■■■■□ 3.28
LYSMD4-208ENST00000493256 CEBPAP49715 358 aaPredicted RBP35.54■■■■□ 3.28
LYSMD4-208ENST00000493256 KIAA1107Q9UPP5 1409 aa35.54■■■■□ 3.28
LYSMD4-208ENST00000493256 PLEKHH2Q8IVE3 1493 aa35.54■■■■□ 3.28
LYSMD4-208ENST00000493256 TIAM1Q13009 1591 aa35.52■■■■□ 3.28
LYSMD4-208ENST00000493256 SPAG9O60271 1321 aaKnown RBP35.51■■■■□ 3.27
LYSMD4-208ENST00000493256 PREX1Q8TCU6 1659 aa35.46■■■■□ 3.27
LYSMD4-208ENST00000493256 LOC105371045A0A1W2PR82 267 aa35.46■■■■□ 3.27
LYSMD4-208ENST00000493256 ATP7AQ04656 1500 aa35.46■■■■□ 3.27
LYSMD4-208ENST00000493256 INO80Q9ULG1 1556 aaPredicted RBP35.44■■■■□ 3.26
LYSMD4-208ENST00000493256 ZNF644Q9H582 1327 aaPredicted RBP35.41■■■■□ 3.26
LYSMD4-208ENST00000493256 C3P01024 1663 aa35.41■■■■□ 3.26
LYSMD4-208ENST00000493256 ESF1Q9H501 851 aaKnown RBP35.38■■■■□ 3.25
LYSMD4-208ENST00000493256 SETD1BQ9UPS6 1966 aaKnown RBP35.36■■■■□ 3.25
LYSMD4-208ENST00000493256 SUPT6HQ7KZ85 1726 aaKnown RBP35.36■■■■□ 3.25
LYSMD4-208ENST00000493256 MBD5Q9P267 1494 aa35.35■■■■□ 3.25
LYSMD4-208ENST00000493256 PLXNC1O60486 1568 aa35.35■■■■□ 3.25
LYSMD4-208ENST00000493256 NCOA2Q15596 1464 aa35.35■■■■□ 3.25
LYSMD4-208ENST00000493256 VPS8Q8N3P4 1428 aa35.34■■■■□ 3.25
LYSMD4-208ENST00000493256 CNTLNQ9NXG0 1405 aa35.34■■■■□ 3.25
LYSMD4-208ENST00000493256 A2MP01023 1474 aa35.34■■■■□ 3.25
LYSMD4-208ENST00000493256 UHRF1BP1Q6BDS2 1440 aa35.33■■■■□ 3.25
LYSMD4-208ENST00000493256 FBXO41Q8TF61 875 aa35.27■■■■□ 3.24
LYSMD4-208ENST00000493256 ADGBQ8N7X0 1667 aa35.26■■■■□ 3.23
LYSMD4-208ENST00000493256 MROH2AA6NES4 1674 aa35.25■■■■□ 3.23
LYSMD4-208ENST00000493256 CAMSAP2Q08AD1 1489 aa35.24■■■■□ 3.23
LYSMD4-208ENST00000493256 RTEL1-TNFRSF6BF6WH68 1400 aa35.22■■■■□ 3.23
LYSMD4-208ENST00000493256 LRRC9Q6ZRR7 1453 aa35.22■■■■□ 3.23
LYSMD4-208ENST00000493256 STRCQ7RTU9 1775 aa35.2■■■■□ 3.23
LYSMD4-208ENST00000493256 ZMYM3Q14202 1370 aa35.19■■■■□ 3.22
LYSMD4-208ENST00000493256 CCDC141Q6ZP82 1450 aa35.19■■■■□ 3.22
LYSMD4-208ENST00000493256 CLTCQ00610 1675 aaKnown RBP35.18■■■■□ 3.22
LYSMD4-208ENST00000493256 GGT6Q6P531 493 aa35.16■■■■□ 3.22
LYSMD4-208ENST00000493256 NPATQ14207 1427 aa35.15■■■■□ 3.22
LYSMD4-208ENST00000493256 MAP3K1Q13233 1512 aa35.13■■■■□ 3.21
LYSMD4-208ENST00000493256 DHX29Q7Z478 1369 aaKnown RBP35.12■■■■□ 3.21
LYSMD4-208ENST00000493256 KANK4Q5T7N3 995 aaPredicted RBP35.1■■■■□ 3.21
LYSMD4-208ENST00000493256 RSPH4AQ5TD94 716 aa35.1■■■■□ 3.21
LYSMD4-208ENST00000493256 ARHGEF5Q12774 1597 aa35.09■■■■□ 3.21
LYSMD4-208ENST00000493256 DMRT2Q9Y5R5 561 aa35.08■■■■□ 3.21
LYSMD4-208ENST00000493256 PPP6R1Q9UPN7 881 aa35.06■■■■□ 3.2
LYSMD4-208ENST00000493256 CERKQ8TCT0 537 aa35.04■■■■□ 3.2
LYSMD4-208ENST00000493256 PTPRKQ15262 1439 aa35.04■■■■□ 3.2
LYSMD4-208ENST00000493256 NCOA1Q15788 1441 aa35.01■■■■□ 3.2
LYSMD4-208ENST00000493256 PTPRTO14522 1441 aa34.99■■■■□ 3.19
LYSMD4-208ENST00000493256 KIF3BO15066 747 aa34.99■■■■□ 3.19
LYSMD4-208ENST00000493256 MYO3AQ8NEV4 1616 aa34.99■■■■□ 3.19
LYSMD4-208ENST00000493256 TSPY4P0CV99 314 aa34.98■■■■□ 3.19
LYSMD4-208ENST00000493256 TSPY10P0CW01 314 aa34.98■■■■□ 3.19
LYSMD4-208ENST00000493256 MYOM3Q5VTT5 1437 aa34.98■■■■□ 3.19
LYSMD4-208ENST00000493256 CAMSAP1Q5T5Y3 1602 aa34.96■■■■□ 3.19
LYSMD4-208ENST00000493256 ZNF142P52746 1687 aaPredicted RBP34.95■■■■□ 3.19
LYSMD4-208ENST00000493256 MIA2Q96PC5 1412 aa34.95■■■■□ 3.19
LYSMD4-208ENST00000493256 MAST1Q9Y2H9 1570 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms