RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 RICTORQ6R327 1708 aa20.18■□□□□ 0.82
CLIP2-209ENST00000493166 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
CLIP2-209ENST00000493166 FRMPD1Q5SYB0 1578 aa20.16■□□□□ 0.82
CLIP2-209ENST00000493166 LRRC9Q6ZRR7 1453 aa20.15■□□□□ 0.82
CLIP2-209ENST00000493166 ADGRL1O94910 1474 aa20.14■□□□□ 0.81
CLIP2-209ENST00000493166 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.81
CLIP2-209ENST00000493166 DENND4BO75064 1496 aaPredicted RBP20.12■□□□□ 0.81
CLIP2-209ENST00000493166 APLP2Q06481 763 aa20.12■□□□□ 0.81
CLIP2-209ENST00000493166 GPATCH8Q9UKJ3 1502 aaKnown RBP20.12■□□□□ 0.81
CLIP2-209ENST00000493166 CCNB3Q8WWL7 1395 aa20.11■□□□□ 0.81
CLIP2-209ENST00000493166 NCOA2Q15596 1464 aa20.1■□□□□ 0.81
CLIP2-209ENST00000493166 ABCC1P33527 1531 aa20.09■□□□□ 0.81
CLIP2-209ENST00000493166 RAPGEF3O95398 923 aa20.09■□□□□ 0.81
CLIP2-209ENST00000493166 AEBP2Q6ZN18 517 aaPredicted RBP20.09■□□□□ 0.81
CLIP2-209ENST00000493166 SCAPERQ9BY12 1400 aa20.09■□□□□ 0.81
CLIP2-209ENST00000493166 SAMD9LQ8IVG5 1584 aa20.08■□□□□ 0.81
CLIP2-209ENST00000493166 POGZQ7Z3K3 1410 aa20.06■□□□□ 0.8
CLIP2-209ENST00000493166 ZMYM4Q5VZL5 1548 aa20.06■□□□□ 0.8
CLIP2-209ENST00000493166 KANK4Q5T7N3 995 aaPredicted RBP20.05■□□□□ 0.8
CLIP2-209ENST00000493166 CFDP1Q9UEE9 299 aaPredicted RBP20.03■□□□□ 0.8
CLIP2-209ENST00000493166 ZNF777Q9ULD5 760 aaPredicted RBP20.03■□□□□ 0.8
CLIP2-209ENST00000493166 ARHGEF40Q8TER5 1519 aa20.02■□□□□ 0.8
CLIP2-209ENST00000493166 ZNF518AQ6AHZ1 1483 aa20.02■□□□□ 0.8
CLIP2-209ENST00000493166 SYCP2Q9BX26 1530 aa20.02■□□□□ 0.79
CLIP2-209ENST00000493166 KDM5CP41229 1560 aa20■□□□□ 0.79
CLIP2-209ENST00000493166 PLEKHH2Q8IVE3 1493 aa20■□□□□ 0.79
CLIP2-209ENST00000493166 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
CLIP2-209ENST00000493166 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
CLIP2-209ENST00000493166 HECW2Q9P2P5 1572 aa19.99■□□□□ 0.79
CLIP2-209ENST00000493166 MAGI2Q86UL8 1455 aa19.98■□□□□ 0.79
CLIP2-209ENST00000493166 KIAA1107Q9UPP5 1409 aa19.95■□□□□ 0.78
CLIP2-209ENST00000493166 TRAPPC8Q9Y2L5 1435 aa19.95■□□□□ 0.78
CLIP2-209ENST00000493166 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
CLIP2-209ENST00000493166 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
CLIP2-209ENST00000493166 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
CLIP2-209ENST00000493166 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
CLIP2-209ENST00000493166 YEATS2Q9ULM3 1422 aa19.93■□□□□ 0.78
CLIP2-209ENST00000493166 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
CLIP2-209ENST00000493166 HNRNPMP52272 730 aaKnown RBP eCLIP19.91■□□□□ 0.78
CLIP2-209ENST00000493166 ABCA6Q8N139 1617 aa19.91■□□□□ 0.78
CLIP2-209ENST00000493166 MYT1LQ9UL68 1186 aa19.9■□□□□ 0.78
CLIP2-209ENST00000493166 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
CLIP2-209ENST00000493166 DIP2CQ9Y2E4 1556 aa19.9■□□□□ 0.78
CLIP2-209ENST00000493166 MIA2Q96PC5 1412 aa19.89■□□□□ 0.77
CLIP2-209ENST00000493166 SIGLEC1Q9BZZ2 1709 aa19.89■□□□□ 0.77
CLIP2-209ENST00000493166 PTPN23Q9H3S7 1636 aa19.88■□□□□ 0.77
CLIP2-209ENST00000493166 INO80Q9ULG1 1556 aaPredicted RBP19.88■□□□□ 0.77
CLIP2-209ENST00000493166 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
CLIP2-209ENST00000493166 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
CLIP2-209ENST00000493166 ATP7AQ04656 1500 aa19.86■□□□□ 0.77
CLIP2-209ENST00000493166 ATP10AO60312 1499 aa19.86■□□□□ 0.77
CLIP2-209ENST00000493166 BCORL1Q5H9F3 1711 aa19.86■□□□□ 0.77
CLIP2-209ENST00000493166 CCDC141Q6ZP82 1450 aa19.86■□□□□ 0.77
CLIP2-209ENST00000493166 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
CLIP2-209ENST00000493166 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
CLIP2-209ENST00000493166 KDM4FA0A1W2PPD8 638 aa19.84■□□□□ 0.77
CLIP2-209ENST00000493166 REREQ9P2R6 1566 aa19.83■□□□□ 0.77
CLIP2-209ENST00000493166 ARID4BQ4LE39 1312 aaPredicted RBP19.83■□□□□ 0.77
CLIP2-209ENST00000493166 ADGBQ8N7X0 1667 aa19.83■□□□□ 0.76
CLIP2-209ENST00000493166 FGD6Q6ZV73 1430 aa19.83■□□□□ 0.76
CLIP2-209ENST00000493166 CROCC2H7BZ55 1655 aa19.81■□□□□ 0.76
CLIP2-209ENST00000493166 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
CLIP2-209ENST00000493166 RSPH4AQ5TD94 716 aa19.79■□□□□ 0.76
CLIP2-209ENST00000493166 PPARGC1BQ86YN6 1023 aaKnown RBP19.78■□□□□ 0.76
CLIP2-209ENST00000493166 TCOF1Q13428 1488 aaKnown RBP19.78■□□□□ 0.76
CLIP2-209ENST00000493166 FER1L4A9Z1Z3 1794 aa19.78■□□□□ 0.76
CLIP2-209ENST00000493166 MAST1Q9Y2H9 1570 aa19.77■□□□□ 0.76
CLIP2-209ENST00000493166 RTEL1-TNFRSF6BF6WH68 1400 aa19.76■□□□□ 0.75
CLIP2-209ENST00000493166 DNMT1P26358 1616 aaKnown RBP19.76■□□□□ 0.75
CLIP2-209ENST00000493166 MADDQ8WXG6 1647 aa19.76■□□□□ 0.75
CLIP2-209ENST00000493166 RIMS1Q86UR5 1692 aaKnown RBP19.75■□□□□ 0.75
CLIP2-209ENST00000493166 AGLP35573 1532 aa19.74■□□□□ 0.75
CLIP2-209ENST00000493166 PLXNC1O60486 1568 aa19.74■□□□□ 0.75
CLIP2-209ENST00000493166 TSPY4P0CV99 314 aa19.73■□□□□ 0.75
CLIP2-209ENST00000493166 TSPY10P0CW01 314 aa19.73■□□□□ 0.75
CLIP2-209ENST00000493166 A2MP01023 1474 aa19.73■□□□□ 0.75
CLIP2-209ENST00000493166 MLECQ14165 292 aa19.7■□□□□ 0.74
CLIP2-209ENST00000493166 SHANK2Q9UPX8 1470 aa19.7■□□□□ 0.74
CLIP2-209ENST00000493166 DAPK1P53355 1430 aa19.69■□□□□ 0.74
CLIP2-209ENST00000493166 ABCC5O15440 1437 aa19.68■□□□□ 0.74
CLIP2-209ENST00000493166 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
CLIP2-209ENST00000493166 PTPRMP28827 1452 aa19.64■□□□□ 0.73
CLIP2-209ENST00000493166 DHX29Q7Z478 1369 aaKnown RBP19.63■□□□□ 0.73
CLIP2-209ENST00000493166 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
CLIP2-209ENST00000493166 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
CLIP2-209ENST00000493166 CLTCQ00610 1675 aaKnown RBP19.6■□□□□ 0.73
CLIP2-209ENST00000493166 MROH2AA6NES4 1674 aa19.59■□□□□ 0.73
CLIP2-209ENST00000493166 C3P01024 1663 aa19.59■□□□□ 0.73
CLIP2-209ENST00000493166 RRBP1Q9P2E9 1410 aaKnown RBP19.58■□□□□ 0.72
CLIP2-209ENST00000493166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
CLIP2-209ENST00000493166 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
CLIP2-209ENST00000493166 ADGRL2O95490 1459 aa19.57■□□□□ 0.72
CLIP2-209ENST00000493166 ESF1Q9H501 851 aaKnown RBP19.57■□□□□ 0.72
CLIP2-209ENST00000493166 CHIC2Q9UKJ5 165 aa19.57■□□□□ 0.72
CLIP2-209ENST00000493166 RNF17Q9BXT8 1623 aaKnown RBP19.57■□□□□ 0.72
CLIP2-209ENST00000493166 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
CLIP2-209ENST00000493166 KIF3BO15066 747 aa19.55■□□□□ 0.72
CLIP2-209ENST00000493166 GGT6Q6P531 493 aa19.55■□□□□ 0.72
CLIP2-209ENST00000493166 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
CLIP2-209ENST00000493166 CNTLNQ9NXG0 1405 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms