RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
FDPS-218ENST00000492887 WDR7Q9Y4E6 1490 aa12.16□□□□□ -0.46
FDPS-218ENST00000492887 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
FDPS-218ENST00000492887 CROCC2H7BZ55 1655 aa12.15□□□□□ -0.46
FDPS-218ENST00000492887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.15□□□□□ -0.46
FDPS-218ENST00000492887 ADGBQ8N7X0 1667 aa12.14□□□□□ -0.47
FDPS-218ENST00000492887 ARHGAP5Q13017 1502 aa12.14□□□□□ -0.47
FDPS-218ENST00000492887 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
FDPS-218ENST00000492887 ASXL2Q76L83 1435 aa12.13□□□□□ -0.47
FDPS-218ENST00000492887 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
FDPS-218ENST00000492887 ABCC10Q5T3U5 1492 aa12.13□□□□□ -0.47
FDPS-218ENST00000492887 ZNF777Q9ULD5 760 aaPredicted RBP12.12□□□□□ -0.47
FDPS-218ENST00000492887 CAMSAP2Q08AD1 1489 aa12.12□□□□□ -0.47
FDPS-218ENST00000492887 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
FDPS-218ENST00000492887 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
FDPS-218ENST00000492887 ABCA9Q8IUA7 1624 aa12.11□□□□□ -0.47
FDPS-218ENST00000492887 GPATCH8Q9UKJ3 1502 aaKnown RBP12.11□□□□□ -0.47
FDPS-218ENST00000492887 TCOF1Q13428 1488 aaKnown RBP12.1□□□□□ -0.47
FDPS-218ENST00000492887 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
FDPS-218ENST00000492887 CFDP1Q9UEE9 299 aaPredicted RBP12.09□□□□□ -0.47
FDPS-218ENST00000492887 MAPKBP1O60336 1514 aa12.09□□□□□ -0.47
FDPS-218ENST00000492887 GCC2Q8IWJ2 1684 aa12.09□□□□□ -0.47
FDPS-218ENST00000492887 SAMD9LQ8IVG5 1584 aa12.09□□□□□ -0.47
FDPS-218ENST00000492887 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
FDPS-218ENST00000492887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.483e-6■□□□□ 10.4
FDPS-218ENST00000492887 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
FDPS-218ENST00000492887 DIP2BQ9P265 1576 aa12.04□□□□□ -0.48
FDPS-218ENST00000492887 ARHGEF5Q12774 1597 aa12.03□□□□□ -0.48
FDPS-218ENST00000492887 MAP3K4Q9Y6R4 1608 aa12.03□□□□□ -0.48
FDPS-218ENST00000492887 DAPK1P53355 1430 aa12.03□□□□□ -0.48
FDPS-218ENST00000492887 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
FDPS-218ENST00000492887 PLEKHH2Q8IVE3 1493 aa12.02□□□□□ -0.49
FDPS-218ENST00000492887 ABCC1P33527 1531 aa12.01□□□□□ -0.49
FDPS-218ENST00000492887 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
FDPS-218ENST00000492887 PLCH2O75038 1416 aa12.01□□□□□ -0.49
FDPS-218ENST00000492887 CHIC2Q9UKJ5 165 aa12□□□□□ -0.49
FDPS-218ENST00000492887 FANCAO15360 1455 aa12□□□□□ -0.49
FDPS-218ENST00000492887 GLI2P10070 1586 aa12□□□□□ -0.49
FDPS-218ENST00000492887 CD109Q6YHK3 1445 aa11.99□□□□□ -0.49
FDPS-218ENST00000492887 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
FDPS-218ENST00000492887 EFCAB2Q5VUJ9 269 aa11.98□□□□□ -0.49
FDPS-218ENST00000492887 ABCC5O15440 1437 aa11.97□□□□□ -0.49
FDPS-218ENST00000492887 SETD5Q9C0A6 1442 aa11.97□□□□□ -0.49
FDPS-218ENST00000492887 ADGRL1O94910 1474 aa11.96□□□□□ -0.49
FDPS-218ENST00000492887 SHANK2Q9UPX8 1470 aa11.96□□□□□ -0.49
FDPS-218ENST00000492887 HNRNPMP52272 730 aaKnown RBP eCLIP11.96□□□□□ -0.49
FDPS-218ENST00000492887 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
FDPS-218ENST00000492887 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.5
FDPS-218ENST00000492887 PTPRKQ15262 1439 aa11.95□□□□□ -0.5
FDPS-218ENST00000492887 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
FDPS-218ENST00000492887 RRP7BPQ9NSQ0 103 aa11.95□□□□□ -0.5
FDPS-218ENST00000492887 MYT1LQ9UL68 1186 aa11.95□□□□□ -0.5
FDPS-218ENST00000492887 MAST1Q9Y2H9 1570 aa11.95□□□□□ -0.5
FDPS-218ENST00000492887 RAB3GAP2Q9H2M9 1393 aa11.94□□□□□ -0.5
FDPS-218ENST00000492887 TSPY4P0CV99 314 aa11.94□□□□□ -0.5
FDPS-218ENST00000492887 TSPY10P0CW01 314 aa11.94□□□□□ -0.5
FDPS-218ENST00000492887 FAM69CQ0P6D2 419 aa11.94□□□□□ -0.5
FDPS-218ENST00000492887 PLXNC1O60486 1568 aa11.93□□□□□ -0.5
FDPS-218ENST00000492887 HFM1A2PYH4 1435 aa11.93□□□□□ -0.5
FDPS-218ENST00000492887 AKNAQ7Z591 1439 aa11.93□□□□□ -0.5
FDPS-218ENST00000492887 ANKRD30AQ9BXX3 1397 aa11.92□□□□□ -0.5
FDPS-218ENST00000492887 KDM6BO15054 1643 aa11.92□□□□□ -0.5
FDPS-218ENST00000492887 KIAA1107Q9UPP5 1409 aa11.92□□□□□ -0.5
FDPS-218ENST00000492887 RICTORQ6R327 1708 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 ADGRL2O95490 1459 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 MBD5Q9P267 1494 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 NAIPQ13075 1403 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 ROCK1Q13464 1354 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
FDPS-218ENST00000492887 NEO1Q92859 1461 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 RSPH4AQ5TD94 716 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 SCAPERQ9BY12 1400 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 DNAJC5Q9H3Z4 198 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 INO80Q9ULG1 1556 aaPredicted RBP11.9□□□□□ -0.5
FDPS-218ENST00000492887 ATP7AQ04656 1500 aa11.9□□□□□ -0.5
FDPS-218ENST00000492887 ZFYVE16Q7Z3T8 1539 aa11.89□□□□□ -0.51
FDPS-218ENST00000492887 TRAPPC8Q9Y2L5 1435 aa11.88□□□□□ -0.51
FDPS-218ENST00000492887 KIDINS220Q9ULH0 1771 aa11.88□□□□□ -0.51
FDPS-218ENST00000492887 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
FDPS-218ENST00000492887 TRIM52Q96A61 297 aa11.87□□□□□ -0.51
FDPS-218ENST00000492887 KIF15Q9NS87 1388 aa11.87□□□□□ -0.51
FDPS-218ENST00000492887 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
FDPS-218ENST00000492887 DENND4BO75064 1496 aaPredicted RBP11.86□□□□□ -0.51
FDPS-218ENST00000492887 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
FDPS-218ENST00000492887 NCOA1Q15788 1441 aa11.86□□□□□ -0.51
FDPS-218ENST00000492887 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
FDPS-218ENST00000492887 POGZQ7Z3K3 1410 aa11.85□□□□□ -0.51
FDPS-218ENST00000492887 KDM5CP41229 1560 aa11.84□□□□□ -0.51
FDPS-218ENST00000492887 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
FDPS-218ENST00000492887 ANKRD50Q9ULJ7 1429 aa11.84□□□□□ -0.51
FDPS-218ENST00000492887 DHX57Q6P158 1386 aaKnown RBP11.83□□□□□ -0.52
FDPS-218ENST00000492887 AFAP1Q8N556 730 aa11.83□□□□□ -0.52
FDPS-218ENST00000492887 FRMPD1Q5SYB0 1578 aa11.83□□□□□ -0.52
FDPS-218ENST00000492887 EIF2AK4Q9P2K8 1649 aaKnown RBP11.82□□□□□ -0.52
FDPS-218ENST00000492887 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
FDPS-218ENST00000492887 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
FDPS-218ENST00000492887 UNC13BO14795 1591 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms