RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 ARHGAP5Q13017 1502 aa24.77■■□□□ 1.56
COPS3-210ENST00000492672 AKNAQ7Z591 1439 aa24.75■■□□□ 1.55
COPS3-210ENST00000492672 EFCAB2Q5VUJ9 269 aa24.74■■□□□ 1.55
COPS3-210ENST00000492672 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
COPS3-210ENST00000492672 KDM6BO15054 1643 aa24.73■■□□□ 1.55
COPS3-210ENST00000492672 ARAP3Q8WWN8 1544 aa24.73■■□□□ 1.55
COPS3-210ENST00000492672 NEO1Q92859 1461 aa24.73■■□□□ 1.55
COPS3-210ENST00000492672 PHLDB1Q86UU1 1377 aa24.73■■□□□ 1.55
COPS3-210ENST00000492672 ZNF644Q9H582 1327 aaPredicted RBP24.72■■□□□ 1.55
COPS3-210ENST00000492672 ITSN2Q9NZM3 1697 aa24.72■■□□□ 1.55
COPS3-210ENST00000492672 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
COPS3-210ENST00000492672 SAMD9LQ8IVG5 1584 aa24.7■■□□□ 1.54
COPS3-210ENST00000492672 CFAP74Q9C0B2 1584 aa24.69■■□□□ 1.54
COPS3-210ENST00000492672 RAPGEF3O95398 923 aa24.68■■□□□ 1.54
COPS3-210ENST00000492672 ARHGEF12Q9NZN5 1544 aa24.67■■□□□ 1.54
COPS3-210ENST00000492672 ADGRL1O94910 1474 aa24.66■■□□□ 1.54
COPS3-210ENST00000492672 SCAPERQ9BY12 1400 aa24.66■■□□□ 1.54
COPS3-210ENST00000492672 MYOM3Q5VTT5 1437 aa24.65■■□□□ 1.54
COPS3-210ENST00000492672 FRMPD1Q5SYB0 1578 aa24.63■■□□□ 1.53
COPS3-210ENST00000492672 HNRNPMP52272 730 aaKnown RBP eCLIP24.63■■□□□ 1.53
COPS3-210ENST00000492672 RICTORQ6R327 1708 aa24.63■■□□□ 1.53
COPS3-210ENST00000492672 ABCC1P33527 1531 aa24.61■■□□□ 1.53
COPS3-210ENST00000492672 TRAPPC8Q9Y2L5 1435 aa24.6■■□□□ 1.53
COPS3-210ENST00000492672 DENND4BO75064 1496 aaPredicted RBP24.59■■□□□ 1.53
COPS3-210ENST00000492672 AFAP1Q8N556 730 aa24.59■■□□□ 1.53
COPS3-210ENST00000492672 SYCP2Q9BX26 1530 aa24.59■■□□□ 1.53
COPS3-210ENST00000492672 CAMSAP2Q08AD1 1489 aa24.58■■□□□ 1.53
COPS3-210ENST00000492672 PTPN23Q9H3S7 1636 aa24.56■■□□□ 1.52
COPS3-210ENST00000492672 FGD6Q6ZV73 1430 aa24.55■■□□□ 1.52
COPS3-210ENST00000492672 POGZQ7Z3K3 1410 aa24.54■■□□□ 1.52
COPS3-210ENST00000492672 MIA2Q96PC5 1412 aa24.53■■□□□ 1.52
COPS3-210ENST00000492672 MBD5Q9P267 1494 aa24.52■■□□□ 1.52
COPS3-210ENST00000492672 KIAA1107Q9UPP5 1409 aa24.51■■□□□ 1.51
COPS3-210ENST00000492672 PLEKHH2Q8IVE3 1493 aa24.48■■□□□ 1.51
COPS3-210ENST00000492672 KDM5CP41229 1560 aa24.47■■□□□ 1.51
COPS3-210ENST00000492672 TCOF1Q13428 1488 aaKnown RBP24.47■■□□□ 1.51
COPS3-210ENST00000492672 ZNF518AQ6AHZ1 1483 aa24.46■■□□□ 1.51
COPS3-210ENST00000492672 FAM50AQ14320 339 aaKnown RBP24.46■■□□□ 1.51
COPS3-210ENST00000492672 YEATS2Q9ULM3 1422 aa24.45■■□□□ 1.51
COPS3-210ENST00000492672 ZMYM4Q5VZL5 1548 aa24.45■■□□□ 1.5
COPS3-210ENST00000492672 KIDINS220Q9ULH0 1771 aa24.44■■□□□ 1.5
COPS3-210ENST00000492672 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
COPS3-210ENST00000492672 HECW2Q9P2P5 1572 aa24.41■■□□□ 1.5
COPS3-210ENST00000492672 MYT1LQ9UL68 1186 aa24.4■■□□□ 1.5
COPS3-210ENST00000492672 CCDC141Q6ZP82 1450 aa24.39■■□□□ 1.5
COPS3-210ENST00000492672 SIGLEC1Q9BZZ2 1709 aa24.38■■□□□ 1.49
COPS3-210ENST00000492672 SPAG9O60271 1321 aaKnown RBP24.38■■□□□ 1.49
COPS3-210ENST00000492672 ABCC5O15440 1437 aa24.38■■□□□ 1.49
COPS3-210ENST00000492672 ZFYVE16Q7Z3T8 1539 aa24.38■■□□□ 1.49
COPS3-210ENST00000492672 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
COPS3-210ENST00000492672 ABCA6Q8N139 1617 aa24.38■■□□□ 1.49
COPS3-210ENST00000492672 MLH3Q9UHC1 1453 aa24.38■■□□□ 1.49
COPS3-210ENST00000492672 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
COPS3-210ENST00000492672 RRBP1Q9P2E9 1410 aaKnown RBP24.36■■□□□ 1.49
COPS3-210ENST00000492672 CROCC2H7BZ55 1655 aa24.36■■□□□ 1.49
COPS3-210ENST00000492672 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
COPS3-210ENST00000492672 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
COPS3-210ENST00000492672 DAPK1P53355 1430 aa24.35■■□□□ 1.49
COPS3-210ENST00000492672 DIP2CQ9Y2E4 1556 aa24.34■■□□□ 1.49
COPS3-210ENST00000492672 MAGI2Q86UL8 1455 aa24.34■■□□□ 1.49
COPS3-210ENST00000492672 RSPH4AQ5TD94 716 aa24.34■■□□□ 1.49
COPS3-210ENST00000492672 ITGAEP38570 1179 aa24.33■■□□□ 1.49
COPS3-210ENST00000492672 CHIC2Q9UKJ5 165 aa24.33■■□□□ 1.49
COPS3-210ENST00000492672 PTPRKQ15262 1439 aa24.33■■□□□ 1.49
COPS3-210ENST00000492672 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
COPS3-210ENST00000492672 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
COPS3-210ENST00000492672 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
COPS3-210ENST00000492672 ATP10AO60312 1499 aa24.29■■□□□ 1.48
COPS3-210ENST00000492672 ADGBQ8N7X0 1667 aa24.29■■□□□ 1.48
COPS3-210ENST00000492672 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
COPS3-210ENST00000492672 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
COPS3-210ENST00000492672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.47
COPS3-210ENST00000492672 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
COPS3-210ENST00000492672 RRP7BPQ9NSQ0 103 aa24.21■■□□□ 1.47
COPS3-210ENST00000492672 ARID4BQ4LE39 1312 aaPredicted RBP24.2■■□□□ 1.46
COPS3-210ENST00000492672 AEBP2Q6ZN18 517 aaPredicted RBP24.2■■□□□ 1.46
COPS3-210ENST00000492672 A2MP01023 1474 aa24.19■■□□□ 1.46
COPS3-210ENST00000492672 PLXNC1O60486 1568 aa24.18■■□□□ 1.46
COPS3-210ENST00000492672 MLECQ14165 292 aa24.18■■□□□ 1.46
COPS3-210ENST00000492672 NCOA1Q15788 1441 aa24.17■■□□□ 1.46
COPS3-210ENST00000492672 REREQ9P2R6 1566 aa24.16■■□□□ 1.46
COPS3-210ENST00000492672 DHX29Q7Z478 1369 aaKnown RBP24.15■■□□□ 1.46
COPS3-210ENST00000492672 ADGRL2O95490 1459 aa24.14■■□□□ 1.46
COPS3-210ENST00000492672 KIF15Q9NS87 1388 aa24.14■■□□□ 1.45
COPS3-210ENST00000492672 BCORL1Q5H9F3 1711 aa24.13■■□□□ 1.45
COPS3-210ENST00000492672 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
COPS3-210ENST00000492672 KDM4FA0A1W2PPD8 638 aa24.12■■□□□ 1.45
COPS3-210ENST00000492672 AGLP35573 1532 aa24.1■■□□□ 1.45
COPS3-210ENST00000492672 DUOX2Q9NRD8 1548 aa24.09■■□□□ 1.45
COPS3-210ENST00000492672 KIF3BO15066 747 aa24.08■■□□□ 1.45
COPS3-210ENST00000492672 ADAMTSL3P82987 1691 aa24.08■■□□□ 1.44
COPS3-210ENST00000492672 ROCK1Q13464 1354 aa24.06■■□□□ 1.44
COPS3-210ENST00000492672 GGT6Q6P531 493 aa24.05■■□□□ 1.44
COPS3-210ENST00000492672 MADDQ8WXG6 1647 aa24.04■■□□□ 1.44
COPS3-210ENST00000492672 FER1L4A9Z1Z3 1794 aa24.01■■□□□ 1.43
COPS3-210ENST00000492672 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
COPS3-210ENST00000492672 RIMS1Q86UR5 1692 aaKnown RBP24■■□□□ 1.43
COPS3-210ENST00000492672 NAIPQ13075 1403 aa24■■□□□ 1.43
COPS3-210ENST00000492672 ANKRD50Q9ULJ7 1429 aa24■■□□□ 1.43
COPS3-210ENST00000492672 ERBINQ96RT1 1412 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms