RNA–Protein interactions for RNA: ENST00000492588.1

C9orf16-204, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 1,570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-204ENST00000492588 PTPN23Q9H3S7 1636 aa26.89■■□□□ 1.9
C9orf16-204ENST00000492588 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
C9orf16-204ENST00000492588 PLCH2O75038 1416 aa26.86■■□□□ 1.89
C9orf16-204ENST00000492588 SAMD9LQ8IVG5 1584 aa26.82■■□□□ 1.88
C9orf16-204ENST00000492588 ARHGAP5Q13017 1502 aa26.81■■□□□ 1.88
C9orf16-204ENST00000492588 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
C9orf16-204ENST00000492588 CAMSAP2Q08AD1 1489 aa26.79■■□□□ 1.88
C9orf16-204ENST00000492588 PPRC1Q5VV67 1664 aaKnown RBP26.79■■□□□ 1.88
C9orf16-204ENST00000492588 CD109Q6YHK3 1445 aa26.78■■□□□ 1.88
C9orf16-204ENST00000492588 CFDP1Q9UEE9 299 aaPredicted RBP26.76■■□□□ 1.87
C9orf16-204ENST00000492588 CFAP74Q9C0B2 1584 aa26.73■■□□□ 1.87
C9orf16-204ENST00000492588 FANCAO15360 1455 aa26.72■■□□□ 1.87
C9orf16-204ENST00000492588 FAM69CQ0P6D2 419 aa26.72■■□□□ 1.87
C9orf16-204ENST00000492588 ABCC1P33527 1531 aa26.72■■□□□ 1.87
C9orf16-204ENST00000492588 ZNF644Q9H582 1327 aaPredicted RBP26.72■■□□□ 1.87
C9orf16-204ENST00000492588 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
C9orf16-204ENST00000492588 TSPOAP1O95153 1857 aa26.68■■□□□ 1.86
C9orf16-204ENST00000492588 SYCP2Q9BX26 1530 aa26.68■■□□□ 1.86
C9orf16-204ENST00000492588 ARHGEF5Q12774 1597 aa26.68■■□□□ 1.86
C9orf16-204ENST00000492588 CROCC2H7BZ55 1655 aa26.68■■□□□ 1.86
C9orf16-204ENST00000492588 MBD5Q9P267 1494 aa26.67■■□□□ 1.86
C9orf16-204ENST00000492588 PLEKHH2Q8IVE3 1493 aa26.66■■□□□ 1.86
C9orf16-204ENST00000492588 ARHGEF12Q9NZN5 1544 aa26.66■■□□□ 1.86
C9orf16-204ENST00000492588 KIAA1107Q9UPP5 1409 aa26.65■■□□□ 1.86
C9orf16-204ENST00000492588 NEO1Q92859 1461 aa26.65■■□□□ 1.86
C9orf16-204ENST00000492588 FAM50AQ14320 339 aaKnown RBP26.65■■□□□ 1.86
C9orf16-204ENST00000492588 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
C9orf16-204ENST00000492588 ZNF777Q9ULD5 760 aaPredicted RBP26.63■■□□□ 1.85
C9orf16-204ENST00000492588 DAPK1P53355 1430 aa26.61■■□□□ 1.85
C9orf16-204ENST00000492588 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
C9orf16-204ENST00000492588 AKNAQ7Z591 1439 aa26.61■■□□□ 1.85
C9orf16-204ENST00000492588 ABCC5O15440 1437 aa26.6■■□□□ 1.85
C9orf16-204ENST00000492588 ADGRL1O94910 1474 aa26.6■■□□□ 1.85
C9orf16-204ENST00000492588 HRCP23327 699 aa26.59■■□□□ 1.85
C9orf16-204ENST00000492588 TEX14Q8IWB6 1497 aa26.59■■□□□ 1.85
C9orf16-204ENST00000492588 CCDC141Q6ZP82 1450 aa26.57■■□□□ 1.84
C9orf16-204ENST00000492588 SHANK2Q9UPX8 1470 aa26.56■■□□□ 1.84
C9orf16-204ENST00000492588 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
C9orf16-204ENST00000492588 MAST1Q9Y2H9 1570 aa26.53■■□□□ 1.84
C9orf16-204ENST00000492588 ADGBQ8N7X0 1667 aa26.53■■□□□ 1.84
C9orf16-204ENST00000492588 SCAPERQ9BY12 1400 aa26.52■■□□□ 1.84
C9orf16-204ENST00000492588 RICTORQ6R327 1708 aa26.51■■□□□ 1.83
C9orf16-204ENST00000492588 HNRNPMP52272 730 aaKnown RBP eCLIP26.51■■□□□ 1.83
C9orf16-204ENST00000492588 KDM5CP41229 1560 aa26.5■■□□□ 1.83
C9orf16-204ENST00000492588 POGZQ7Z3K3 1410 aa26.5■■□□□ 1.83
C9orf16-204ENST00000492588 FRMPD1Q5SYB0 1578 aa26.49■■□□□ 1.83
C9orf16-204ENST00000492588 ADGRL2O95490 1459 aa26.49■■□□□ 1.83
C9orf16-204ENST00000492588 ITGAEP38570 1179 aa26.47■■□□□ 1.83
C9orf16-204ENST00000492588 INO80Q9ULG1 1556 aaPredicted RBP26.47■■□□□ 1.83
C9orf16-204ENST00000492588 C9orf84Q5VXU9 1444 aa26.47■■□□□ 1.83
C9orf16-204ENST00000492588 ZNF518AQ6AHZ1 1483 aa26.46■■□□□ 1.83
C9orf16-204ENST00000492588 RSPH4AQ5TD94 716 aa26.46■■□□□ 1.83
C9orf16-204ENST00000492588 ZFYVE16Q7Z3T8 1539 aa26.46■■□□□ 1.83
C9orf16-204ENST00000492588 GCC2Q8IWJ2 1684 aa26.45■■□□□ 1.82
C9orf16-204ENST00000492588 ZEB1P37275 1124 aaPredicted RBP26.45■■□□□ 1.82
C9orf16-204ENST00000492588 DENND4BO75064 1496 aaPredicted RBP26.44■■□□□ 1.82
C9orf16-204ENST00000492588 TRHP20396 242 aaPredicted RBP26.43■■□□□ 1.82
C9orf16-204ENST00000492588 ROCK1Q13464 1354 aa26.43■■□□□ 1.82
C9orf16-204ENST00000492588 PLXNC1O60486 1568 aa26.43■■□□□ 1.82
C9orf16-204ENST00000492588 HFM1A2PYH4 1435 aa26.41■■□□□ 1.82
C9orf16-204ENST00000492588 ZMYM4Q5VZL5 1548 aa26.4■■□□□ 1.82
C9orf16-204ENST00000492588 COL17A1Q9UMD9 1497 aaPredicted RBP26.39■■□□□ 1.82
C9orf16-204ENST00000492588 NCOA1Q15788 1441 aa26.39■■□□□ 1.82
C9orf16-204ENST00000492588 KIDINS220Q9ULH0 1771 aa26.39■■□□□ 1.82
C9orf16-204ENST00000492588 HECW2Q9P2P5 1572 aa26.39■■□□□ 1.82
C9orf16-204ENST00000492588 ATP7AQ04656 1500 aa26.39■■□□□ 1.81
C9orf16-204ENST00000492588 AFAP1Q8N556 730 aa26.38■■□□□ 1.81
C9orf16-204ENST00000492588 RTEL1-TNFRSF6BF6WH68 1400 aa26.38■■□□□ 1.81
C9orf16-204ENST00000492588 NAIPQ13075 1403 aa26.36■■□□□ 1.81
C9orf16-204ENST00000492588 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
C9orf16-204ENST00000492588 MLH3Q9UHC1 1453 aa26.35■■□□□ 1.81
C9orf16-204ENST00000492588 TSPY4P0CV99 314 aa26.34■■□□□ 1.81
C9orf16-204ENST00000492588 TSPY10P0CW01 314 aa26.34■■□□□ 1.81
C9orf16-204ENST00000492588 ANKRD30AQ9BXX3 1397 aa26.33■■□□□ 1.8
C9orf16-204ENST00000492588 RAPGEF3O95398 923 aa26.32■■□□□ 1.8
C9orf16-204ENST00000492588 SPAG9O60271 1321 aaKnown RBP26.31■■□□□ 1.8
C9orf16-204ENST00000492588 KDM6BO15054 1643 aa26.3■■□□□ 1.8
C9orf16-204ENST00000492588 ABCA6Q8N139 1617 aa26.3■■□□□ 1.8
C9orf16-204ENST00000492588 SETD5Q9C0A6 1442 aa26.29■■□□□ 1.8
C9orf16-204ENST00000492588 KIF15Q9NS87 1388 aa26.28■■□□□ 1.8
C9orf16-204ENST00000492588 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
C9orf16-204ENST00000492588 DIP2CQ9Y2E4 1556 aa26.27■■□□□ 1.8
C9orf16-204ENST00000492588 MAGI2Q86UL8 1455 aa26.25■■□□□ 1.79
C9orf16-204ENST00000492588 DUOX2Q9NRD8 1548 aa26.25■■□□□ 1.79
C9orf16-204ENST00000492588 RAB3GAP2Q9H2M9 1393 aa26.24■■□□□ 1.79
C9orf16-204ENST00000492588 ARHGEF40Q8TER5 1519 aa26.21■■□□□ 1.79
C9orf16-204ENST00000492588 YEATS2Q9ULM3 1422 aa26.21■■□□□ 1.79
C9orf16-204ENST00000492588 ANKRD50Q9ULJ7 1429 aa26.21■■□□□ 1.79
C9orf16-204ENST00000492588 ERBINQ96RT1 1412 aa26.18■■□□□ 1.78
C9orf16-204ENST00000492588 EIF2AK4Q9P2K8 1649 aaKnown RBP26.18■■□□□ 1.78
C9orf16-204ENST00000492588 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
C9orf16-204ENST00000492588 REREQ9P2R6 1566 aa26.16■■□□□ 1.78
C9orf16-204ENST00000492588 BCORL1Q5H9F3 1711 aa26.16■■□□□ 1.78
C9orf16-204ENST00000492588 A2MP01023 1474 aa26.14■■□□□ 1.78
C9orf16-204ENST00000492588 UNC13BO14795 1591 aa26.13■■□□□ 1.77
C9orf16-204ENST00000492588 DHX29Q7Z478 1369 aaKnown RBP26.12■■□□□ 1.77
C9orf16-204ENST00000492588 DEPDC5O75140 1603 aa26.12■■□□□ 1.77
C9orf16-204ENST00000492588 SIGLEC1Q9BZZ2 1709 aa26.11■■□□□ 1.77
C9orf16-204ENST00000492588 ATP10AO60312 1499 aa26.09■■□□□ 1.77
C9orf16-204ENST00000492588 RNF17Q9BXT8 1623 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms