RNA–Protein interactions for RNA: ENST00000492367.1

NUCB1-212, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 1,515 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-212ENST00000492367 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
NUCB1-212ENST00000492367 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
NUCB1-212ENST00000492367 ITGAEP38570 1179 aa28.65■■■□□ 2.18
NUCB1-212ENST00000492367 PLCH2O75038 1416 aa28.63■■■□□ 2.17
NUCB1-212ENST00000492367 DNMT1P26358 1616 aaKnown RBP28.63■■■□□ 2.17
NUCB1-212ENST00000492367 ZNF777Q9ULD5 760 aaPredicted RBP28.59■■■□□ 2.17
NUCB1-212ENST00000492367 PLEKHH2Q8IVE3 1493 aa28.58■■■□□ 2.17
NUCB1-212ENST00000492367 SAMD9LQ8IVG5 1584 aa28.57■■■□□ 2.16
NUCB1-212ENST00000492367 DAPK1P53355 1430 aa28.55■■■□□ 2.16
NUCB1-212ENST00000492367 ZNF644Q9H582 1327 aaPredicted RBP28.54■■■□□ 2.16
NUCB1-212ENST00000492367 CROCC2H7BZ55 1655 aa28.54■■■□□ 2.16
NUCB1-212ENST00000492367 EFCAB2Q5VUJ9 269 aa28.53■■■□□ 2.16
NUCB1-212ENST00000492367 ARHGEF5Q12774 1597 aa28.53■■■□□ 2.16
NUCB1-212ENST00000492367 GLI2P10070 1586 aa28.51■■■□□ 2.16
NUCB1-212ENST00000492367 ABCC5O15440 1437 aa28.5■■■□□ 2.15
NUCB1-212ENST00000492367 CFAP74Q9C0B2 1584 aa28.5■■■□□ 2.15
NUCB1-212ENST00000492367 AKNAQ7Z591 1439 aa28.49■■■□□ 2.15
NUCB1-212ENST00000492367 PTPRKQ15262 1439 aa28.49■■■□□ 2.15
NUCB1-212ENST00000492367 KIAA1107Q9UPP5 1409 aa28.49■■■□□ 2.15
NUCB1-212ENST00000492367 RSPH4AQ5TD94 716 aa28.48■■■□□ 2.15
NUCB1-212ENST00000492367 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
NUCB1-212ENST00000492367 SHANK2Q9UPX8 1470 aa28.47■■■□□ 2.15
NUCB1-212ENST00000492367 CD109Q6YHK3 1445 aa28.46■■■□□ 2.15
NUCB1-212ENST00000492367 SETD5Q9C0A6 1442 aa28.46■■■□□ 2.15
NUCB1-212ENST00000492367 FANCAO15360 1455 aa28.46■■■□□ 2.15
NUCB1-212ENST00000492367 CCDC141Q6ZP82 1450 aa28.45■■■□□ 2.15
NUCB1-212ENST00000492367 ABCC1P33527 1531 aa28.45■■■□□ 2.14
NUCB1-212ENST00000492367 SYCP2Q9BX26 1530 aa28.45■■■□□ 2.14
NUCB1-212ENST00000492367 DIP2BQ9P265 1576 aa28.45■■■□□ 2.14
NUCB1-212ENST00000492367 HFM1A2PYH4 1435 aa28.44■■■□□ 2.14
NUCB1-212ENST00000492367 MAP3K4Q9Y6R4 1608 aa28.44■■■□□ 2.14
NUCB1-212ENST00000492367 ROCK1Q13464 1354 aa28.44■■■□□ 2.14
NUCB1-212ENST00000492367 GCC2Q8IWJ2 1684 aa28.43■■■□□ 2.14
NUCB1-212ENST00000492367 MBD5Q9P267 1494 aa28.42■■■□□ 2.14
NUCB1-212ENST00000492367 DNAJC5Q9H3Z4 198 aa28.4■■■□□ 2.14
NUCB1-212ENST00000492367 ADGRL2O95490 1459 aa28.39■■■□□ 2.13
NUCB1-212ENST00000492367 TSPY4P0CV99 314 aa28.38■■■□□ 2.13
NUCB1-212ENST00000492367 TSPY10P0CW01 314 aa28.38■■■□□ 2.13
NUCB1-212ENST00000492367 HNRNPMP52272 730 aaKnown RBP eCLIP28.38■■■□□ 2.13
NUCB1-212ENST00000492367 CHIC2Q9UKJ5 165 aa28.37■■■□□ 2.13
NUCB1-212ENST00000492367 RAB3GAP2Q9H2M9 1393 aa28.37■■■□□ 2.13
NUCB1-212ENST00000492367 HRCP23327 699 aa28.36■■■□□ 2.13
NUCB1-212ENST00000492367 C9orf84Q5VXU9 1444 aa28.36■■■□□ 2.13
NUCB1-212ENST00000492367 MAST1Q9Y2H9 1570 aa28.36■■■□□ 2.13
NUCB1-212ENST00000492367 NAIPQ13075 1403 aa28.35■■■□□ 2.13
NUCB1-212ENST00000492367 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
NUCB1-212ENST00000492367 NEO1Q92859 1461 aa28.34■■■□□ 2.13
NUCB1-212ENST00000492367 ANKRD30AQ9BXX3 1397 aa28.34■■■□□ 2.13
NUCB1-212ENST00000492367 FAM69CQ0P6D2 419 aa28.32■■■□□ 2.12
NUCB1-212ENST00000492367 ARHGEF12Q9NZN5 1544 aa28.31■■■□□ 2.12
NUCB1-212ENST00000492367 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
NUCB1-212ENST00000492367 RRP7BPQ9NSQ0 103 aa28.29■■■□□ 2.12
NUCB1-212ENST00000492367 NCOA1Q15788 1441 aa28.29■■■□□ 2.12
NUCB1-212ENST00000492367 CCER1Q8TC90 406 aaPredicted RBP28.28■■■□□ 2.12
NUCB1-212ENST00000492367 KIF13AQ9H1H9 1805 aa28.28■■■□□ 2.12
NUCB1-212ENST00000492367 SCAPERQ9BY12 1400 aa28.26■■■□□ 2.11
NUCB1-212ENST00000492367 TEX14Q8IWB6 1497 aa28.25■■■□□ 2.11
NUCB1-212ENST00000492367 PLXNC1O60486 1568 aa28.25■■■□□ 2.11
NUCB1-212ENST00000492367 TRAPPC8Q9Y2L5 1435 aa28.24■■■□□ 2.11
NUCB1-212ENST00000492367 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
NUCB1-212ENST00000492367 RTEL1-TNFRSF6BF6WH68 1400 aa28.2■■■□□ 2.11
NUCB1-212ENST00000492367 TSPOAP1O95153 1857 aa28.18■■■□□ 2.1
NUCB1-212ENST00000492367 PPRC1Q5VV67 1664 aaKnown RBP28.18■■■□□ 2.1
NUCB1-212ENST00000492367 KIF15Q9NS87 1388 aa28.17■■■□□ 2.1
NUCB1-212ENST00000492367 SPAG9O60271 1321 aaKnown RBP28.17■■■□□ 2.1
NUCB1-212ENST00000492367 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
NUCB1-212ENST00000492367 ZEB1P37275 1124 aaPredicted RBP28.16■■■□□ 2.1
NUCB1-212ENST00000492367 DHX57Q6P158 1386 aaKnown RBP28.16■■■□□ 2.1
NUCB1-212ENST00000492367 POGZQ7Z3K3 1410 aa28.16■■■□□ 2.1
NUCB1-212ENST00000492367 ZFYVE16Q7Z3T8 1539 aa28.16■■■□□ 2.1
NUCB1-212ENST00000492367 DENND4BO75064 1496 aaPredicted RBP28.14■■■□□ 2.1
NUCB1-212ENST00000492367 ATP7AQ04656 1500 aa28.14■■■□□ 2.1
NUCB1-212ENST00000492367 ANKRD50Q9ULJ7 1429 aa28.13■■■□□ 2.09
NUCB1-212ENST00000492367 KDM6BO15054 1643 aa28.13■■■□□ 2.09
NUCB1-212ENST00000492367 KDM5CP41229 1560 aa28.13■■■□□ 2.09
NUCB1-212ENST00000492367 DUOX2Q9NRD8 1548 aa28.12■■■□□ 2.09
NUCB1-212ENST00000492367 CLSPNQ9HAW4 1339 aa28.12■■■□□ 2.09
NUCB1-212ENST00000492367 AFAP1Q8N556 730 aa28.12■■■□□ 2.09
NUCB1-212ENST00000492367 HECW2Q9P2P5 1572 aa28.08■■■□□ 2.09
NUCB1-212ENST00000492367 RICTORQ6R327 1708 aa28.07■■■□□ 2.08
NUCB1-212ENST00000492367 ERBINQ96RT1 1412 aa28.05■■■□□ 2.08
NUCB1-212ENST00000492367 MLH3Q9UHC1 1453 aa28.05■■■□□ 2.08
NUCB1-212ENST00000492367 MYT1LQ9UL68 1186 aa28.04■■■□□ 2.08
NUCB1-212ENST00000492367 KIDINS220Q9ULH0 1771 aa28.04■■■□□ 2.08
NUCB1-212ENST00000492367 TRIM52Q96A61 297 aa28.03■■■□□ 2.08
NUCB1-212ENST00000492367 ZMYM4Q5VZL5 1548 aa27.98■■■□□ 2.07
NUCB1-212ENST00000492367 FRMPD1Q5SYB0 1578 aa27.97■■■□□ 2.07
NUCB1-212ENST00000492367 KDM5DQ9BY66 1539 aa27.96■■■□□ 2.07
NUCB1-212ENST00000492367 UNC13BO14795 1591 aa27.96■■■□□ 2.07
NUCB1-212ENST00000492367 EIF2AK4Q9P2K8 1649 aaKnown RBP27.96■■■□□ 2.07
NUCB1-212ENST00000492367 RAPGEF3O95398 923 aa27.93■■■□□ 2.06
NUCB1-212ENST00000492367 MAGI2Q86UL8 1455 aa27.92■■■□□ 2.06
NUCB1-212ENST00000492367 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
NUCB1-212ENST00000492367 ABCA6Q8N139 1617 aa27.91■■■□□ 2.06
NUCB1-212ENST00000492367 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
NUCB1-212ENST00000492367 A2MP01023 1474 aa27.9■■■□□ 2.06
NUCB1-212ENST00000492367 DIP2CQ9Y2E4 1556 aa27.88■■■□□ 2.05
NUCB1-212ENST00000492367 MPHOSPH9Q99550 1183 aa27.87■■■□□ 2.05
NUCB1-212ENST00000492367 NUP155O75694 1391 aa27.87■■■□□ 2.05
NUCB1-212ENST00000492367 PZPP20742 1482 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms