RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
TCEA3-206ENST00000492271 ATP1B4Q9UN42 357 aaPredicted RBP28.36■■■□□ 2.13
TCEA3-206ENST00000492271 CASKIN1Q8WXD9 1431 aa28.34■■■□□ 2.13
TCEA3-206ENST00000492271 SCAPERQ9BY12 1400 aa28.34■■■□□ 2.13
TCEA3-206ENST00000492271 RIMS1Q86UR5 1692 aaKnown RBP28.32■■■□□ 2.12
TCEA3-206ENST00000492271 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
TCEA3-206ENST00000492271 CDC42BPBQ9Y5S2 1711 aa28.31■■■□□ 2.12
TCEA3-206ENST00000492271 CCDC18Q5T9S5 1454 aa28.29■■■□□ 2.12
TCEA3-206ENST00000492271 CLIP1P30622 1438 aa28.29■■■□□ 2.12
TCEA3-206ENST00000492271 ARID4BQ4LE39 1312 aaPredicted RBP28.29■■■□□ 2.12
TCEA3-206ENST00000492271 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
TCEA3-206ENST00000492271 KDM5CP41229 1560 aa28.26■■■□□ 2.11
TCEA3-206ENST00000492271 ARHGAP5Q13017 1502 aa28.26■■■□□ 2.11
TCEA3-206ENST00000492271 EFCAB2Q5VUJ9 269 aa28.25■■■□□ 2.11
TCEA3-206ENST00000492271 FYCO1Q9BQS8 1478 aa28.25■■■□□ 2.11
TCEA3-206ENST00000492271 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
TCEA3-206ENST00000492271 FER1L4A9Z1Z3 1794 aa28.21■■■□□ 2.11
TCEA3-206ENST00000492271 CDC42BPAQ5VT25 1732 aa28.21■■■□□ 2.11
TCEA3-206ENST00000492271 ATP10AO60312 1499 aa28.18■■■□□ 2.1
TCEA3-206ENST00000492271 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
TCEA3-206ENST00000492271 ABCC1P33527 1531 aa28.17■■■□□ 2.1
TCEA3-206ENST00000492271 C9orf84Q5VXU9 1444 aa28.17■■■□□ 2.1
TCEA3-206ENST00000492271 ARHGEF12Q9NZN5 1544 aa28.16■■■□□ 2.1
TCEA3-206ENST00000492271 ITSN2Q9NZM3 1697 aa28.16■■■□□ 2.1
TCEA3-206ENST00000492271 DIP2CQ9Y2E4 1556 aa28.14■■■□□ 2.1
TCEA3-206ENST00000492271 ILDR1Q86SU0 546 aaPredicted RBP28.12■■■□□ 2.09
TCEA3-206ENST00000492271 ABCA6Q8N139 1617 aa28.11■■■□□ 2.09
TCEA3-206ENST00000492271 REREQ9P2R6 1566 aa28.11■■■□□ 2.09
TCEA3-206ENST00000492271 AFAP1Q8N556 730 aa28.09■■■□□ 2.09
TCEA3-206ENST00000492271 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
TCEA3-206ENST00000492271 TRAPPC8Q9Y2L5 1435 aa28.07■■■□□ 2.08
TCEA3-206ENST00000492271 KIDINS220Q9ULH0 1771 aa28.04■■■□□ 2.08
TCEA3-206ENST00000492271 SAMD9LQ8IVG5 1584 aa28.04■■■□□ 2.08
TCEA3-206ENST00000492271 MLECQ14165 292 aa28.04■■■□□ 2.08
TCEA3-206ENST00000492271 GPATCH8Q9UKJ3 1502 aaKnown RBP28.01■■■□□ 2.07
TCEA3-206ENST00000492271 AGLP35573 1532 aa27.97■■■□□ 2.07
TCEA3-206ENST00000492271 SYCP2Q9BX26 1530 aa27.97■■■□□ 2.07
TCEA3-206ENST00000492271 PREX1Q8TCU6 1659 aa27.96■■■□□ 2.07
TCEA3-206ENST00000492271 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
TCEA3-206ENST00000492271 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
TCEA3-206ENST00000492271 HSPA2P54652 639 aa27.9■■■□□ 2.06
TCEA3-206ENST00000492271 C3P01024 1663 aa27.89■■■□□ 2.06
TCEA3-206ENST00000492271 TIAM1Q13009 1591 aa27.89■■■□□ 2.05
TCEA3-206ENST00000492271 EHBP1L1Q8N3D4 1523 aa27.88■■■□□ 2.05
TCEA3-206ENST00000492271 INO80Q9ULG1 1556 aaPredicted RBP27.88■■■□□ 2.05
TCEA3-206ENST00000492271 KIAA1107Q9UPP5 1409 aa27.87■■■□□ 2.05
TCEA3-206ENST00000492271 MYT1LQ9UL68 1186 aa27.86■■■□□ 2.05
TCEA3-206ENST00000492271 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
TCEA3-206ENST00000492271 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
TCEA3-206ENST00000492271 PLEKHH2Q8IVE3 1493 aa27.84■■■□□ 2.05
TCEA3-206ENST00000492271 CEBPAP49715 358 aaPredicted RBP27.84■■■□□ 2.05
TCEA3-206ENST00000492271 CCNB3Q8WWL7 1395 aa27.84■■■□□ 2.05
TCEA3-206ENST00000492271 ATP7AQ04656 1500 aa27.83■■■□□ 2.05
TCEA3-206ENST00000492271 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
TCEA3-206ENST00000492271 PLXNC1O60486 1568 aa27.82■■■□□ 2.04
TCEA3-206ENST00000492271 SUPT6HQ7KZ85 1726 aaKnown RBP27.79■■■□□ 2.04
TCEA3-206ENST00000492271 HNRNPMP52272 730 aaKnown RBP eCLIP27.79■■■□□ 2.04
TCEA3-206ENST00000492271 CFDP1Q9UEE9 299 aaPredicted RBP27.79■■■□□ 2.04
TCEA3-206ENST00000492271 MROH2AA6NES4 1674 aa27.78■■■□□ 2.04
TCEA3-206ENST00000492271 STRCQ7RTU9 1775 aa27.77■■■□□ 2.04
TCEA3-206ENST00000492271 SPAG9O60271 1321 aaKnown RBP27.76■■■□□ 2.03
TCEA3-206ENST00000492271 FBXO41Q8TF61 875 aa27.74■■■□□ 2.03
TCEA3-206ENST00000492271 MBD5Q9P267 1494 aa27.74■■■□□ 2.03
TCEA3-206ENST00000492271 UHRF1BP1Q6BDS2 1440 aa27.74■■■□□ 2.03
TCEA3-206ENST00000492271 ADGBQ8N7X0 1667 aa27.73■■■□□ 2.03
TCEA3-206ENST00000492271 CNTLNQ9NXG0 1405 aa27.73■■■□□ 2.03
TCEA3-206ENST00000492271 A2MP01023 1474 aa27.7■■■□□ 2.03
TCEA3-206ENST00000492271 ZNF644Q9H582 1327 aaPredicted RBP27.7■■■□□ 2.03
TCEA3-206ENST00000492271 NCOA2Q15596 1464 aa27.69■■■□□ 2.02
TCEA3-206ENST00000492271 CLTCQ00610 1675 aaKnown RBP27.67■■■□□ 2.02
TCEA3-206ENST00000492271 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
TCEA3-206ENST00000492271 NPATQ14207 1427 aa27.62■■■□□ 2.01
TCEA3-206ENST00000492271 ESF1Q9H501 851 aaKnown RBP27.62■■■□□ 2.01
TCEA3-206ENST00000492271 CAMSAP2Q08AD1 1489 aa27.62■■■□□ 2.01
TCEA3-206ENST00000492271 RTEL1-TNFRSF6BF6WH68 1400 aa27.61■■■□□ 2.01
TCEA3-206ENST00000492271 ZMYM3Q14202 1370 aa27.59■■■□□ 2.01
TCEA3-206ENST00000492271 LOC105371045A0A1W2PR82 267 aa27.58■■■□□ 2.01
TCEA3-206ENST00000492271 CCDC141Q6ZP82 1450 aa27.57■■■□□ 2
TCEA3-206ENST00000492271 LRRC9Q6ZRR7 1453 aa27.57■■■□□ 2
TCEA3-206ENST00000492271 ZNF142P52746 1687 aaPredicted RBP27.56■■■□□ 2
TCEA3-206ENST00000492271 MYO3AQ8NEV4 1616 aa27.56■■■□□ 2
TCEA3-206ENST00000492271 ARHGEF5Q12774 1597 aa27.55■■■□□ 2
TCEA3-206ENST00000492271 MAP3K1Q13233 1512 aa27.52■■■□□ 2
TCEA3-206ENST00000492271 NCOA1Q15788 1441 aa27.52■■■□□ 2
TCEA3-206ENST00000492271 PTPRTO14522 1441 aa27.51■■□□□ 1.99
TCEA3-206ENST00000492271 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
TCEA3-206ENST00000492271 CERKQ8TCT0 537 aa27.51■■□□□ 1.99
TCEA3-206ENST00000492271 DHX29Q7Z478 1369 aaKnown RBP27.49■■□□□ 1.99
TCEA3-206ENST00000492271 DMRT2Q9Y5R5 561 aa27.49■■□□□ 1.99
TCEA3-206ENST00000492271 CAMSAP1Q5T5Y3 1602 aa27.49■■□□□ 1.99
TCEA3-206ENST00000492271 GGT6Q6P531 493 aa27.47■■□□□ 1.99
TCEA3-206ENST00000492271 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
TCEA3-206ENST00000492271 CEP170BQ9Y4F5 1589 aaPredicted RBP27.46■■□□□ 1.99
TCEA3-206ENST00000492271 FAM135AQ9P2D6 1515 aa27.45■■□□□ 1.98
TCEA3-206ENST00000492271 MAST1Q9Y2H9 1570 aa27.43■■□□□ 1.98
TCEA3-206ENST00000492271 RSPH4AQ5TD94 716 aa27.43■■□□□ 1.98
TCEA3-206ENST00000492271 KDM5DQ9BY66 1539 aa27.41■■□□□ 1.98
TCEA3-206ENST00000492271 LTBP4Q8N2S1 1624 aa27.41■■□□□ 1.98
TCEA3-206ENST00000492271 KANK4Q5T7N3 995 aaPredicted RBP27.41■■□□□ 1.98
TCEA3-206ENST00000492271 PLA2R1Q13018 1463 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms