RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
MRPL55-231ENST00000492170 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
MRPL55-231ENST00000492170 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
MRPL55-231ENST00000492170 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
MRPL55-231ENST00000492170 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
MRPL55-231ENST00000492170 CCDC18Q5T9S5 1454 aa25.04■■□□□ 1.6
MRPL55-231ENST00000492170 LRRIQ1Q96JM4 1722 aa25.04■■□□□ 1.6
MRPL55-231ENST00000492170 PCF11O94913 1555 aaKnown RBP25.04■■□□□ 1.6
MRPL55-231ENST00000492170 ARHGAP5Q13017 1502 aa25.03■■□□□ 1.6
MRPL55-231ENST00000492170 ILDR1Q86SU0 546 aaPredicted RBP25.03■■□□□ 1.6
MRPL55-231ENST00000492170 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
MRPL55-231ENST00000492170 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
MRPL55-231ENST00000492170 SIGLEC1Q9BZZ2 1709 aa24.98■■□□□ 1.59
MRPL55-231ENST00000492170 ATP10AO60312 1499 aa24.97■■□□□ 1.59
MRPL55-231ENST00000492170 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
MRPL55-231ENST00000492170 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
MRPL55-231ENST00000492170 MLECQ14165 292 aa24.94■■□□□ 1.58
MRPL55-231ENST00000492170 LMTK3Q96Q04 1460 aa24.94■■□□□ 1.58
MRPL55-231ENST00000492170 KDM5CP41229 1560 aa24.93■■□□□ 1.58
MRPL55-231ENST00000492170 PREX2Q70Z35 1606 aa24.92■■□□□ 1.58
MRPL55-231ENST00000492170 FER1L4A9Z1Z3 1794 aa24.91■■□□□ 1.58
MRPL55-231ENST00000492170 AFAP1Q8N556 730 aa24.91■■□□□ 1.58
MRPL55-231ENST00000492170 CDC42BPBQ9Y5S2 1711 aa24.91■■□□□ 1.58
MRPL55-231ENST00000492170 PLPPR3Q6T4P5 718 aa24.9■■□□□ 1.58
MRPL55-231ENST00000492170 MYT1LQ9UL68 1186 aa24.89■■□□□ 1.58
MRPL55-231ENST00000492170 ARHGEF12Q9NZN5 1544 aa24.88■■□□□ 1.57
MRPL55-231ENST00000492170 ABCC1P33527 1531 aa24.87■■□□□ 1.57
MRPL55-231ENST00000492170 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
MRPL55-231ENST00000492170 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.57
MRPL55-231ENST00000492170 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
MRPL55-231ENST00000492170 ITSN2Q9NZM3 1697 aa24.81■■□□□ 1.56
MRPL55-231ENST00000492170 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
MRPL55-231ENST00000492170 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
MRPL55-231ENST00000492170 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
MRPL55-231ENST00000492170 HSPA2P54652 639 aa24.78■■□□□ 1.56
MRPL55-231ENST00000492170 GPATCH8Q9UKJ3 1502 aaKnown RBP24.75■■□□□ 1.55
MRPL55-231ENST00000492170 ZNF777Q9ULD5 760 aaPredicted RBP24.74■■□□□ 1.55
MRPL55-231ENST00000492170 AGLP35573 1532 aa24.73■■□□□ 1.55
MRPL55-231ENST00000492170 SAMD9LQ8IVG5 1584 aa24.72■■□□□ 1.55
MRPL55-231ENST00000492170 MTUS2Q5JR59 1369 aa24.72■■□□□ 1.55
MRPL55-231ENST00000492170 SYCP2Q9BX26 1530 aa24.71■■□□□ 1.55
MRPL55-231ENST00000492170 FBXO41Q8TF61 875 aa24.71■■□□□ 1.55
MRPL55-231ENST00000492170 KIDINS220Q9ULH0 1771 aa24.71■■□□□ 1.55
MRPL55-231ENST00000492170 PREX1Q8TCU6 1659 aa24.7■■□□□ 1.54
MRPL55-231ENST00000492170 CEBPAP49715 358 aaPredicted RBP24.7■■□□□ 1.54
MRPL55-231ENST00000492170 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
MRPL55-231ENST00000492170 PLEKHH2Q8IVE3 1493 aa24.68■■□□□ 1.54
MRPL55-231ENST00000492170 ESF1Q9H501 851 aaKnown RBP24.67■■□□□ 1.54
MRPL55-231ENST00000492170 CFDP1Q9UEE9 299 aaPredicted RBP24.67■■□□□ 1.54
MRPL55-231ENST00000492170 CEP162Q5TB80 1403 aa24.66■■□□□ 1.54
MRPL55-231ENST00000492170 KIAA1107Q9UPP5 1409 aa24.66■■□□□ 1.54
MRPL55-231ENST00000492170 SPAG9O60271 1321 aaKnown RBP24.65■■□□□ 1.54
MRPL55-231ENST00000492170 UHRF1BP1Q6BDS2 1440 aa24.64■■□□□ 1.54
MRPL55-231ENST00000492170 HNRNPMP52272 730 aaKnown RBP eCLIP24.64■■□□□ 1.54
MRPL55-231ENST00000492170 EHBP1L1Q8N3D4 1523 aa24.64■■□□□ 1.53
MRPL55-231ENST00000492170 CNTLNQ9NXG0 1405 aa24.61■■□□□ 1.53
MRPL55-231ENST00000492170 ATP7AQ04656 1500 aa24.61■■□□□ 1.53
MRPL55-231ENST00000492170 C3P01024 1663 aa24.6■■□□□ 1.53
MRPL55-231ENST00000492170 SETD1BQ9UPS6 1966 aaKnown RBP24.59■■□□□ 1.53
MRPL55-231ENST00000492170 TIAM1Q13009 1591 aa24.59■■□□□ 1.53
MRPL55-231ENST00000492170 INO80Q9ULG1 1556 aaPredicted RBP24.58■■□□□ 1.52
MRPL55-231ENST00000492170 A2MP01023 1474 aa24.53■■□□□ 1.52
MRPL55-231ENST00000492170 PLXNC1O60486 1568 aa24.53■■□□□ 1.52
MRPL55-231ENST00000492170 SUPT6HQ7KZ85 1726 aaKnown RBP24.52■■□□□ 1.52
MRPL55-231ENST00000492170 DMRT2Q9Y5R5 561 aa24.51■■□□□ 1.51
MRPL55-231ENST00000492170 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
MRPL55-231ENST00000492170 ZNF644Q9H582 1327 aaPredicted RBP24.5■■□□□ 1.51
MRPL55-231ENST00000492170 STRCQ7RTU9 1775 aa24.48■■□□□ 1.51
MRPL55-231ENST00000492170 CERKQ8TCT0 537 aa24.48■■□□□ 1.51
MRPL55-231ENST00000492170 MBD5Q9P267 1494 aa24.48■■□□□ 1.51
MRPL55-231ENST00000492170 NPATQ14207 1427 aa24.47■■□□□ 1.51
MRPL55-231ENST00000492170 NCOA2Q15596 1464 aa24.46■■□□□ 1.51
MRPL55-231ENST00000492170 ZMYM3Q14202 1370 aa24.46■■□□□ 1.51
MRPL55-231ENST00000492170 ADGBQ8N7X0 1667 aa24.46■■□□□ 1.51
MRPL55-231ENST00000492170 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
MRPL55-231ENST00000492170 GGT6Q6P531 493 aa24.42■■□□□ 1.5
MRPL55-231ENST00000492170 CLTCQ00610 1675 aaKnown RBP24.42■■□□□ 1.5
MRPL55-231ENST00000492170 CCDC141Q6ZP82 1450 aa24.41■■□□□ 1.5
MRPL55-231ENST00000492170 PTPRTO14522 1441 aa24.41■■□□□ 1.5
MRPL55-231ENST00000492170 VPS8Q8N3P4 1428 aa24.41■■□□□ 1.5
MRPL55-231ENST00000492170 CAMSAP2Q08AD1 1489 aa24.4■■□□□ 1.5
MRPL55-231ENST00000492170 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
MRPL55-231ENST00000492170 NCOA1Q15788 1441 aa24.38■■□□□ 1.49
MRPL55-231ENST00000492170 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
MRPL55-231ENST00000492170 DHX29Q7Z478 1369 aaKnown RBP24.37■■□□□ 1.49
MRPL55-231ENST00000492170 RSPH4AQ5TD94 716 aa24.36■■□□□ 1.49
MRPL55-231ENST00000492170 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
MRPL55-231ENST00000492170 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
MRPL55-231ENST00000492170 CAMSAP1Q5T5Y3 1602 aa24.34■■□□□ 1.49
MRPL55-231ENST00000492170 MYO3AQ8NEV4 1616 aa24.33■■□□□ 1.49
MRPL55-231ENST00000492170 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
MRPL55-231ENST00000492170 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
MRPL55-231ENST00000492170 KIF3BO15066 747 aa24.29■■□□□ 1.48
MRPL55-231ENST00000492170 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
MRPL55-231ENST00000492170 TSPY4P0CV99 314 aa24.28■■□□□ 1.48
MRPL55-231ENST00000492170 TSPY10P0CW01 314 aa24.28■■□□□ 1.48
MRPL55-231ENST00000492170 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
MRPL55-231ENST00000492170 FAM135AQ9P2D6 1515 aa24.27■■□□□ 1.48
MRPL55-231ENST00000492170 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
MRPL55-231ENST00000492170 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms