RNA–Protein interactions for RNA: ENST00000492016.5

NELFCD-211, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-211ENST00000492016 PPRC1Q5VV67 1664 aaKnown RBP24.45■■□□□ 1.5
NELFCD-211ENST00000492016 ITSN2Q9NZM3 1697 aa24.45■■□□□ 1.5
NELFCD-211ENST00000492016 FANCAO15360 1455 aa24.45■■□□□ 1.5
NELFCD-211ENST00000492016 CFAP74Q9C0B2 1584 aa24.44■■□□□ 1.5
NELFCD-211ENST00000492016 ARHGAP5Q13017 1502 aa24.44■■□□□ 1.5
NELFCD-211ENST00000492016 CDC42BPAQ5VT25 1732 aa24.44■■□□□ 1.5
NELFCD-211ENST00000492016 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
NELFCD-211ENST00000492016 AKNAQ7Z591 1439 aa24.39■■□□□ 1.5
NELFCD-211ENST00000492016 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
NELFCD-211ENST00000492016 TSPOAP1O95153 1857 aa24.37■■□□□ 1.49
NELFCD-211ENST00000492016 PLEKHH2Q8IVE3 1493 aa24.37■■□□□ 1.49
NELFCD-211ENST00000492016 FGD6Q6ZV73 1430 aa24.36■■□□□ 1.49
NELFCD-211ENST00000492016 KIAA1107Q9UPP5 1409 aa24.35■■□□□ 1.49
NELFCD-211ENST00000492016 ADGRL1O94910 1474 aa24.32■■□□□ 1.48
NELFCD-211ENST00000492016 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
NELFCD-211ENST00000492016 SAMD9LQ8IVG5 1584 aa24.3■■□□□ 1.48
NELFCD-211ENST00000492016 TCOF1Q13428 1488 aaKnown RBP24.3■■□□□ 1.48
NELFCD-211ENST00000492016 ABCC1P33527 1531 aa24.3■■□□□ 1.48
NELFCD-211ENST00000492016 SCAPERQ9BY12 1400 aa24.29■■□□□ 1.48
NELFCD-211ENST00000492016 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
NELFCD-211ENST00000492016 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
NELFCD-211ENST00000492016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.28■■□□□ 1.48
NELFCD-211ENST00000492016 DENND4BO75064 1496 aaPredicted RBP24.27■■□□□ 1.48
NELFCD-211ENST00000492016 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
NELFCD-211ENST00000492016 PTPN23Q9H3S7 1636 aa24.26■■□□□ 1.47
NELFCD-211ENST00000492016 ZNF644Q9H582 1327 aaPredicted RBP24.26■■□□□ 1.47
NELFCD-211ENST00000492016 POGZQ7Z3K3 1410 aa24.23■■□□□ 1.47
NELFCD-211ENST00000492016 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
NELFCD-211ENST00000492016 ARHGEF12Q9NZN5 1544 aa24.23■■□□□ 1.47
NELFCD-211ENST00000492016 KDM6BO15054 1643 aa24.22■■□□□ 1.47
NELFCD-211ENST00000492016 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
NELFCD-211ENST00000492016 ZNF518AQ6AHZ1 1483 aa24.22■■□□□ 1.47
NELFCD-211ENST00000492016 COL17A1Q9UMD9 1497 aaPredicted RBP24.22■■□□□ 1.47
NELFCD-211ENST00000492016 ARHGEF5Q12774 1597 aa24.2■■□□□ 1.47
NELFCD-211ENST00000492016 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
NELFCD-211ENST00000492016 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
NELFCD-211ENST00000492016 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
NELFCD-211ENST00000492016 RAPGEF3O95398 923 aa24.17■■□□□ 1.46
NELFCD-211ENST00000492016 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
NELFCD-211ENST00000492016 KDM5CP41229 1560 aa24.16■■□□□ 1.46
NELFCD-211ENST00000492016 AFAP1Q8N556 730 aa24.15■■□□□ 1.46
NELFCD-211ENST00000492016 FRMPD1Q5SYB0 1578 aa24.15■■□□□ 1.46
NELFCD-211ENST00000492016 RICTORQ6R327 1708 aa24.15■■□□□ 1.46
NELFCD-211ENST00000492016 ZMYM4Q5VZL5 1548 aa24.15■■□□□ 1.46
NELFCD-211ENST00000492016 MAGI2Q86UL8 1455 aa24.13■■□□□ 1.45
NELFCD-211ENST00000492016 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
NELFCD-211ENST00000492016 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
NELFCD-211ENST00000492016 MLH3Q9UHC1 1453 aa24.12■■□□□ 1.45
NELFCD-211ENST00000492016 RTEL1-TNFRSF6BF6WH68 1400 aa24.11■■□□□ 1.45
NELFCD-211ENST00000492016 ABCC5O15440 1437 aa24.11■■□□□ 1.45
NELFCD-211ENST00000492016 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
NELFCD-211ENST00000492016 DAPK1P53355 1430 aa24.1■■□□□ 1.45
NELFCD-211ENST00000492016 SHANK2Q9UPX8 1470 aa24.1■■□□□ 1.45
NELFCD-211ENST00000492016 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
NELFCD-211ENST00000492016 MAST1Q9Y2H9 1570 aa24.07■■□□□ 1.44
NELFCD-211ENST00000492016 HECW2Q9P2P5 1572 aa24.06■■□□□ 1.44
NELFCD-211ENST00000492016 C9orf84Q5VXU9 1444 aa24.04■■□□□ 1.44
NELFCD-211ENST00000492016 INO80Q9ULG1 1556 aaPredicted RBP24.03■■□□□ 1.44
NELFCD-211ENST00000492016 CROCC2H7BZ55 1655 aa24.02■■□□□ 1.44
NELFCD-211ENST00000492016 ATP7AQ04656 1500 aa24.02■■□□□ 1.44
NELFCD-211ENST00000492016 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
NELFCD-211ENST00000492016 ADGRL2O95490 1459 aa24■■□□□ 1.43
NELFCD-211ENST00000492016 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
NELFCD-211ENST00000492016 ROCK1Q13464 1354 aa23.99■■□□□ 1.43
NELFCD-211ENST00000492016 KIDINS220Q9ULH0 1771 aa23.98■■□□□ 1.43
NELFCD-211ENST00000492016 ARHGEF40Q8TER5 1519 aa23.98■■□□□ 1.43
NELFCD-211ENST00000492016 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
NELFCD-211ENST00000492016 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
NELFCD-211ENST00000492016 YEATS2Q9ULM3 1422 aa23.97■■□□□ 1.43
NELFCD-211ENST00000492016 PLXNC1O60486 1568 aa23.96■■□□□ 1.43
NELFCD-211ENST00000492016 ATP10AO60312 1499 aa23.95■■□□□ 1.42
NELFCD-211ENST00000492016 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
NELFCD-211ENST00000492016 DIP2CQ9Y2E4 1556 aa23.94■■□□□ 1.42
NELFCD-211ENST00000492016 ITGAEP38570 1179 aa23.93■■□□□ 1.42
NELFCD-211ENST00000492016 REREQ9P2R6 1566 aa23.93■■□□□ 1.42
NELFCD-211ENST00000492016 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
NELFCD-211ENST00000492016 CHIC2Q9UKJ5 165 aa23.92■■□□□ 1.42
NELFCD-211ENST00000492016 ABCA6Q8N139 1617 aa23.92■■□□□ 1.42
NELFCD-211ENST00000492016 DHX29Q7Z478 1369 aaKnown RBP23.9■■□□□ 1.42
NELFCD-211ENST00000492016 KIF15Q9NS87 1388 aa23.9■■□□□ 1.42
NELFCD-211ENST00000492016 ADGBQ8N7X0 1667 aa23.89■■□□□ 1.42
NELFCD-211ENST00000492016 A2MP01023 1474 aa23.89■■□□□ 1.42
NELFCD-211ENST00000492016 DUOX2Q9NRD8 1548 aa23.88■■□□□ 1.41
NELFCD-211ENST00000492016 RRP7BPQ9NSQ0 103 aa23.86■■□□□ 1.41
NELFCD-211ENST00000492016 AGLP35573 1532 aa23.85■■□□□ 1.41
NELFCD-211ENST00000492016 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
NELFCD-211ENST00000492016 HFM1A2PYH4 1435 aa23.83■■□□□ 1.4
NELFCD-211ENST00000492016 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
NELFCD-211ENST00000492016 NAIPQ13075 1403 aa23.79■■□□□ 1.4
NELFCD-211ENST00000492016 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
NELFCD-211ENST00000492016 BCORL1Q5H9F3 1711 aa23.76■■□□□ 1.39
NELFCD-211ENST00000492016 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
NELFCD-211ENST00000492016 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
NELFCD-211ENST00000492016 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
NELFCD-211ENST00000492016 ARID4BQ4LE39 1312 aaPredicted RBP23.73■■□□□ 1.39
NELFCD-211ENST00000492016 KIF3BO15066 747 aa23.72■■□□□ 1.39
NELFCD-211ENST00000492016 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
NELFCD-211ENST00000492016 SIGLEC1Q9BZZ2 1709 aa23.7■■□□□ 1.38
NELFCD-211ENST00000492016 HRCP23327 699 aa23.68■■□□□ 1.38
NELFCD-211ENST00000492016 FAM135AQ9P2D6 1515 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms