RNA–Protein interactions for RNA: ENST00000491990.5

NUP188-209, Transcript of nucleoporin 188, humanhuman

TSL 5

Gene NUP188, Length 381 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-209ENST00000491990 SCAPERQ9BY12 1400 aa37.58■■■■□ 3.61
NUP188-209ENST00000491990 BCORL1Q5H9F3 1711 aa37.58■■■■□ 3.61
NUP188-209ENST00000491990 MAGI2Q86UL8 1455 aa37.55■■■■□ 3.6
NUP188-209ENST00000491990 POGZQ7Z3K3 1410 aa37.54■■■■□ 3.6
NUP188-209ENST00000491990 ZFYVE16Q7Z3T8 1539 aa37.54■■■■□ 3.6
NUP188-209ENST00000491990 PTPRMP28827 1452 aa37.51■■■■□ 3.59
NUP188-209ENST00000491990 FYCO1Q9BQS8 1478 aa37.51■■■■□ 3.59
NUP188-209ENST00000491990 ARHGAP5Q13017 1502 aa37.49■■■■□ 3.59
NUP188-209ENST00000491990 YEATS2Q9ULM3 1422 aa37.48■■■■□ 3.59
NUP188-209ENST00000491990 MADDQ8WXG6 1647 aa37.46■■■■□ 3.59
NUP188-209ENST00000491990 CDC42BPBQ9Y5S2 1711 aa37.39■■■■□ 3.58
NUP188-209ENST00000491990 ZNF518AQ6AHZ1 1483 aa37.39■■■■□ 3.58
NUP188-209ENST00000491990 PREX2Q70Z35 1606 aa37.36■■■■□ 3.57
NUP188-209ENST00000491990 SIGLEC1Q9BZZ2 1709 aa37.35■■■■□ 3.57
NUP188-209ENST00000491990 RIMS1Q86UR5 1692 aaKnown RBP37.34■■■■□ 3.57
NUP188-209ENST00000491990 ATP10AO60312 1499 aa37.33■■■■□ 3.57
NUP188-209ENST00000491990 KDM5CP41229 1560 aa37.3■■■■□ 3.56
NUP188-209ENST00000491990 AFAP1Q8N556 730 aa37.29■■■■□ 3.56
NUP188-209ENST00000491990 C9orf84Q5VXU9 1444 aa37.28■■■■□ 3.56
NUP188-209ENST00000491990 CDC42BPAQ5VT25 1732 aa37.27■■■■□ 3.56
NUP188-209ENST00000491990 ABCC1P33527 1531 aa37.24■■■■□ 3.55
NUP188-209ENST00000491990 MLECQ14165 292 aa37.23■■■■□ 3.55
NUP188-209ENST00000491990 MYT1LQ9UL68 1186 aa37.22■■■■□ 3.55
NUP188-209ENST00000491990 FER1L4A9Z1Z3 1794 aa37.19■■■■□ 3.54
NUP188-209ENST00000491990 ITSN2Q9NZM3 1697 aa37.19■■■■□ 3.54
NUP188-209ENST00000491990 ARHGEF12Q9NZN5 1544 aa37.18■■■■□ 3.54
NUP188-209ENST00000491990 MLH3Q9UHC1 1453 aa37.18■■■■□ 3.54
NUP188-209ENST00000491990 CEP162Q5TB80 1403 aa37.18■■■■□ 3.54
NUP188-209ENST00000491990 TRAPPC8Q9Y2L5 1435 aa37.16■■■■□ 3.54
NUP188-209ENST00000491990 DIP2CQ9Y2E4 1556 aa37.15■■■■□ 3.54
NUP188-209ENST00000491990 GPATCH8Q9UKJ3 1502 aaKnown RBP37.14■■■■□ 3.54
NUP188-209ENST00000491990 MTUS2Q5JR59 1369 aa37.13■■■■□ 3.53
NUP188-209ENST00000491990 REREQ9P2R6 1566 aa37.11■■■■□ 3.53
NUP188-209ENST00000491990 LMTK3Q96Q04 1460 aa37.1■■■■□ 3.53
NUP188-209ENST00000491990 PLPPR3Q6T4P5 718 aa37.1■■■■□ 3.53
NUP188-209ENST00000491990 ZNF777Q9ULD5 760 aaPredicted RBP37.1■■■■□ 3.53
NUP188-209ENST00000491990 ABCA6Q8N139 1617 aa37.1■■■■□ 3.53
NUP188-209ENST00000491990 SAMD9LQ8IVG5 1584 aa37.08■■■■□ 3.53
NUP188-209ENST00000491990 CCNB3Q8WWL7 1395 aa37.06■■■■□ 3.52
NUP188-209ENST00000491990 CFDP1Q9UEE9 299 aaPredicted RBP37.03■■■■□ 3.52
NUP188-209ENST00000491990 KIDINS220Q9ULH0 1771 aa37.02■■■■□ 3.52
NUP188-209ENST00000491990 SYCP2Q9BX26 1530 aa37.02■■■■□ 3.52
NUP188-209ENST00000491990 EHBP1L1Q8N3D4 1523 aa37.01■■■■□ 3.52
NUP188-209ENST00000491990 PLEKHH2Q8IVE3 1493 aa37■■■■□ 3.51
NUP188-209ENST00000491990 AGLP35573 1532 aa36.99■■■■□ 3.51
NUP188-209ENST00000491990 ILDR1Q86SU0 546 aaPredicted RBP36.98■■■■□ 3.51
NUP188-209ENST00000491990 KIAA1107Q9UPP5 1409 aa36.98■■■■□ 3.51
NUP188-209ENST00000491990 HNRNPMP52272 730 aaKnown RBP eCLIP36.96■■■■□ 3.51
NUP188-209ENST00000491990 SPAG9O60271 1321 aaKnown RBP36.93■■■■□ 3.5
NUP188-209ENST00000491990 TIAM1Q13009 1591 aa36.91■■■■□ 3.5
NUP188-209ENST00000491990 LOC105371045A0A1W2PR82 267 aa36.88■■■■□ 3.49
NUP188-209ENST00000491990 CEBPAP49715 358 aaPredicted RBP36.88■■■■□ 3.49
NUP188-209ENST00000491990 HSPA2P54652 639 aa36.88■■■■□ 3.49
NUP188-209ENST00000491990 ESF1Q9H501 851 aaKnown RBP36.86■■■■□ 3.49
NUP188-209ENST00000491990 ATP7AQ04656 1500 aa36.85■■■■□ 3.49
NUP188-209ENST00000491990 PREX1Q8TCU6 1659 aa36.85■■■■□ 3.49
NUP188-209ENST00000491990 INO80Q9ULG1 1556 aaPredicted RBP36.83■■■■□ 3.49
NUP188-209ENST00000491990 SETD1BQ9UPS6 1966 aaKnown RBP36.8■■■■□ 3.48
NUP188-209ENST00000491990 SUPT6HQ7KZ85 1726 aaKnown RBP36.8■■■■□ 3.48
NUP188-209ENST00000491990 VPS8Q8N3P4 1428 aa36.79■■■■□ 3.48
NUP188-209ENST00000491990 ZNF644Q9H582 1327 aaPredicted RBP36.79■■■■□ 3.48
NUP188-209ENST00000491990 C3P01024 1663 aa36.77■■■■□ 3.48
NUP188-209ENST00000491990 CNTLNQ9NXG0 1405 aa36.76■■■■□ 3.48
NUP188-209ENST00000491990 NCOA2Q15596 1464 aa36.76■■■■□ 3.48
NUP188-209ENST00000491990 A2MP01023 1474 aa36.73■■■■□ 3.47
NUP188-209ENST00000491990 MBD5Q9P267 1494 aa36.73■■■■□ 3.47
NUP188-209ENST00000491990 PLXNC1O60486 1568 aa36.72■■■■□ 3.47
NUP188-209ENST00000491990 UHRF1BP1Q6BDS2 1440 aa36.72■■■■□ 3.47
NUP188-209ENST00000491990 ADGBQ8N7X0 1667 aa36.68■■■■□ 3.46
NUP188-209ENST00000491990 MROH2AA6NES4 1674 aa36.65■■■■□ 3.46
NUP188-209ENST00000491990 RTEL1-TNFRSF6BF6WH68 1400 aa36.65■■■■□ 3.46
NUP188-209ENST00000491990 LRRC9Q6ZRR7 1453 aa36.64■■■■□ 3.46
NUP188-209ENST00000491990 CAMSAP2Q08AD1 1489 aa36.63■■■■□ 3.45
NUP188-209ENST00000491990 CCDC141Q6ZP82 1450 aa36.61■■■■□ 3.45
NUP188-209ENST00000491990 RSPH4AQ5TD94 716 aa36.6■■■■□ 3.45
NUP188-209ENST00000491990 FBXO41Q8TF61 875 aa36.6■■■■□ 3.45
NUP188-209ENST00000491990 MAP3K1Q13233 1512 aa36.59■■■■□ 3.45
NUP188-209ENST00000491990 ZMYM3Q14202 1370 aa36.57■■■■□ 3.45
NUP188-209ENST00000491990 GGT6Q6P531 493 aa36.56■■■■□ 3.44
NUP188-209ENST00000491990 CLTCQ00610 1675 aaKnown RBP36.55■■■■□ 3.44
NUP188-209ENST00000491990 NPATQ14207 1427 aa36.54■■■■□ 3.44
NUP188-209ENST00000491990 PPP6R1Q9UPN7 881 aa36.53■■■■□ 3.44
NUP188-209ENST00000491990 STRCQ7RTU9 1775 aa36.52■■■■□ 3.44
NUP188-209ENST00000491990 DHX29Q7Z478 1369 aaKnown RBP36.52■■■■□ 3.44
NUP188-209ENST00000491990 DMRT2Q9Y5R5 561 aa36.51■■■■□ 3.44
NUP188-209ENST00000491990 ARHGEF5Q12774 1597 aa36.5■■■■□ 3.43
NUP188-209ENST00000491990 KANK4Q5T7N3 995 aaPredicted RBP36.49■■■■□ 3.43
NUP188-209ENST00000491990 TSPY4P0CV99 314 aa36.45■■■■□ 3.43
NUP188-209ENST00000491990 TSPY10P0CW01 314 aa36.45■■■■□ 3.43
NUP188-209ENST00000491990 KIF3BO15066 747 aa36.39■■■■□ 3.42
NUP188-209ENST00000491990 PTPRKQ15262 1439 aa36.39■■■■□ 3.42
NUP188-209ENST00000491990 MYOM3Q5VTT5 1437 aa36.39■■■■□ 3.42
NUP188-209ENST00000491990 MIA2Q96PC5 1412 aa36.39■■■■□ 3.42
NUP188-209ENST00000491990 APLP2Q06481 763 aa36.38■■■■□ 3.41
NUP188-209ENST00000491990 CERKQ8TCT0 537 aa36.37■■■■□ 3.41
NUP188-209ENST00000491990 PTPRTO14522 1441 aa36.35■■■■□ 3.41
NUP188-209ENST00000491990 NCOA1Q15788 1441 aa36.34■■■■□ 3.41
NUP188-209ENST00000491990 MYO3AQ8NEV4 1616 aa36.33■■■■□ 3.41
NUP188-209ENST00000491990 FAM135AQ9P2D6 1515 aa36.33■■■■□ 3.41
NUP188-209ENST00000491990 MAST1Q9Y2H9 1570 aa36.32■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms