RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CEP162Q5TB80 1403 aa24.18■■□□□ 1.46
TOM1-215ENST00000491987 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
TOM1-215ENST00000491987 ZFYVE16Q7Z3T8 1539 aa24.14■■□□□ 1.45
TOM1-215ENST00000491987 YEATS2Q9ULM3 1422 aa24.13■■□□□ 1.45
TOM1-215ENST00000491987 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
TOM1-215ENST00000491987 ARID4BQ4LE39 1312 aaPredicted RBP24.12■■□□□ 1.45
TOM1-215ENST00000491987 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
TOM1-215ENST00000491987 MAGI2Q86UL8 1455 aa24.11■■□□□ 1.45
TOM1-215ENST00000491987 ADAMTSL3P82987 1691 aa24.09■■□□□ 1.45
TOM1-215ENST00000491987 BCORL1Q5H9F3 1711 aa24.09■■□□□ 1.45
TOM1-215ENST00000491987 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
TOM1-215ENST00000491987 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
TOM1-215ENST00000491987 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
TOM1-215ENST00000491987 SIGLEC1Q9BZZ2 1709 aa24.04■■□□□ 1.44
TOM1-215ENST00000491987 MADDQ8WXG6 1647 aa24.03■■□□□ 1.44
TOM1-215ENST00000491987 ABCC1P33527 1531 aa24.03■■□□□ 1.44
TOM1-215ENST00000491987 KDM5CP41229 1560 aa24.03■■□□□ 1.44
TOM1-215ENST00000491987 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
TOM1-215ENST00000491987 AFAP1Q8N556 730 aa24.02■■□□□ 1.44
TOM1-215ENST00000491987 PTPRMP28827 1452 aa24■■□□□ 1.43
TOM1-215ENST00000491987 ARHGEF12Q9NZN5 1544 aa24■■□□□ 1.43
TOM1-215ENST00000491987 GPATCH8Q9UKJ3 1502 aaKnown RBP24■■□□□ 1.43
TOM1-215ENST00000491987 ITSN2Q9NZM3 1697 aa23.99■■□□□ 1.43
TOM1-215ENST00000491987 ATP10AO60312 1499 aa23.99■■□□□ 1.43
TOM1-215ENST00000491987 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
TOM1-215ENST00000491987 C9orf84Q5VXU9 1444 aa23.97■■□□□ 1.43
TOM1-215ENST00000491987 EHBP1L1Q8N3D4 1523 aa23.97■■□□□ 1.43
TOM1-215ENST00000491987 TRAPPC8Q9Y2L5 1435 aa23.97■■□□□ 1.43
TOM1-215ENST00000491987 SAMD9LQ8IVG5 1584 aa23.96■■□□□ 1.43
TOM1-215ENST00000491987 MYT1LQ9UL68 1186 aa23.96■■□□□ 1.43
TOM1-215ENST00000491987 ZNF777Q9ULD5 760 aaPredicted RBP23.96■■□□□ 1.43
TOM1-215ENST00000491987 RIMS1Q86UR5 1692 aaKnown RBP23.95■■□□□ 1.43
TOM1-215ENST00000491987 CCNB3Q8WWL7 1395 aa23.95■■□□□ 1.42
TOM1-215ENST00000491987 MLECQ14165 292 aa23.94■■□□□ 1.42
TOM1-215ENST00000491987 DIP2CQ9Y2E4 1556 aa23.93■■□□□ 1.42
TOM1-215ENST00000491987 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
TOM1-215ENST00000491987 VPS8Q8N3P4 1428 aa23.92■■□□□ 1.42
TOM1-215ENST00000491987 SYCP2Q9BX26 1530 aa23.91■■□□□ 1.42
TOM1-215ENST00000491987 CFDP1Q9UEE9 299 aaPredicted RBP23.91■■□□□ 1.42
TOM1-215ENST00000491987 ABCA6Q8N139 1617 aa23.91■■□□□ 1.42
TOM1-215ENST00000491987 TIAM1Q13009 1591 aa23.91■■□□□ 1.42
TOM1-215ENST00000491987 FER1L4A9Z1Z3 1794 aa23.87■■□□□ 1.41
TOM1-215ENST00000491987 HNRNPMP52272 730 aaKnown RBP eCLIP23.86■■□□□ 1.41
TOM1-215ENST00000491987 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
TOM1-215ENST00000491987 KIDINS220Q9ULH0 1771 aa23.86■■□□□ 1.41
TOM1-215ENST00000491987 PLEKHH2Q8IVE3 1493 aa23.85■■□□□ 1.41
TOM1-215ENST00000491987 PLPPR3Q6T4P5 718 aa23.84■■□□□ 1.41
TOM1-215ENST00000491987 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
TOM1-215ENST00000491987 SUPT6HQ7KZ85 1726 aaKnown RBP23.83■■□□□ 1.41
TOM1-215ENST00000491987 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
TOM1-215ENST00000491987 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
TOM1-215ENST00000491987 ZNF644Q9H582 1327 aaPredicted RBP23.8■■□□□ 1.4
TOM1-215ENST00000491987 LRRC9Q6ZRR7 1453 aa23.77■■□□□ 1.4
TOM1-215ENST00000491987 AGLP35573 1532 aa23.77■■□□□ 1.4
TOM1-215ENST00000491987 ATP7AQ04656 1500 aa23.77■■□□□ 1.4
TOM1-215ENST00000491987 INO80Q9ULG1 1556 aaPredicted RBP23.76■■□□□ 1.39
TOM1-215ENST00000491987 LMTK3Q96Q04 1460 aa23.75■■□□□ 1.39
TOM1-215ENST00000491987 MBD5Q9P267 1494 aa23.73■■□□□ 1.39
TOM1-215ENST00000491987 MAP3K1Q13233 1512 aa23.73■■□□□ 1.39
TOM1-215ENST00000491987 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
TOM1-215ENST00000491987 CEBPAP49715 358 aaPredicted RBP23.69■■□□□ 1.38
TOM1-215ENST00000491987 KANK4Q5T7N3 995 aaPredicted RBP23.69■■□□□ 1.38
TOM1-215ENST00000491987 A2MP01023 1474 aa23.67■■□□□ 1.38
TOM1-215ENST00000491987 PLXNC1O60486 1568 aa23.66■■□□□ 1.38
TOM1-215ENST00000491987 CCDC141Q6ZP82 1450 aa23.65■■□□□ 1.38
TOM1-215ENST00000491987 ESF1Q9H501 851 aaKnown RBP23.65■■□□□ 1.38
TOM1-215ENST00000491987 ADGBQ8N7X0 1667 aa23.64■■□□□ 1.37
TOM1-215ENST00000491987 HSPA2P54652 639 aa23.63■■□□□ 1.37
TOM1-215ENST00000491987 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
TOM1-215ENST00000491987 C3P01024 1663 aa23.62■■□□□ 1.37
TOM1-215ENST00000491987 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
TOM1-215ENST00000491987 APLP2Q06481 763 aa23.6■■□□□ 1.37
TOM1-215ENST00000491987 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
TOM1-215ENST00000491987 CNTLNQ9NXG0 1405 aa23.59■■□□□ 1.37
TOM1-215ENST00000491987 MYOM3Q5VTT5 1437 aa23.58■■□□□ 1.36
TOM1-215ENST00000491987 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
TOM1-215ENST00000491987 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
TOM1-215ENST00000491987 UHRF1BP1Q6BDS2 1440 aa23.54■■□□□ 1.36
TOM1-215ENST00000491987 MIA2Q96PC5 1412 aa23.54■■□□□ 1.36
TOM1-215ENST00000491987 GGT6Q6P531 493 aa23.54■■□□□ 1.36
TOM1-215ENST00000491987 CLTCQ00610 1675 aaKnown RBP23.54■■□□□ 1.36
TOM1-215ENST00000491987 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
TOM1-215ENST00000491987 TSPY4P0CV99 314 aa23.51■■□□□ 1.35
TOM1-215ENST00000491987 TSPY10P0CW01 314 aa23.51■■□□□ 1.35
TOM1-215ENST00000491987 ZMYM3Q14202 1370 aa23.5■■□□□ 1.35
TOM1-215ENST00000491987 MAST1Q9Y2H9 1570 aa23.48■■□□□ 1.35
TOM1-215ENST00000491987 KIF3BO15066 747 aa23.45■■□□□ 1.34
TOM1-215ENST00000491987 SETD1BQ9UPS6 1966 aaKnown RBP23.45■■□□□ 1.34
TOM1-215ENST00000491987 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
TOM1-215ENST00000491987 NPATQ14207 1427 aa23.44■■□□□ 1.34
TOM1-215ENST00000491987 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
TOM1-215ENST00000491987 PPP6R1Q9UPN7 881 aa23.43■■□□□ 1.34
TOM1-215ENST00000491987 FGD6Q6ZV73 1430 aa23.41■■□□□ 1.34
TOM1-215ENST00000491987 PTPRKQ15262 1439 aa23.39■■□□□ 1.33
TOM1-215ENST00000491987 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
TOM1-215ENST00000491987 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
TOM1-215ENST00000491987 STRCQ7RTU9 1775 aa23.37■■□□□ 1.33
TOM1-215ENST00000491987 TCOF1Q13428 1488 aaKnown RBP23.37■■□□□ 1.33
TOM1-215ENST00000491987 ABCC5O15440 1437 aa23.37■■□□□ 1.33
TOM1-215ENST00000491987 MYO3AQ8NEV4 1616 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms