RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
C3orf49-202ENST00000491896 ZMYM4Q5VZL5 1548 aa19.12■□□□□ 0.65
C3orf49-202ENST00000491896 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
C3orf49-202ENST00000491896 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
C3orf49-202ENST00000491896 FRMPD1Q5SYB0 1578 aa19.1■□□□□ 0.65
C3orf49-202ENST00000491896 AKNAQ7Z591 1439 aa19.1■□□□□ 0.65
C3orf49-202ENST00000491896 RICTORQ6R327 1708 aa19.1■□□□□ 0.65
C3orf49-202ENST00000491896 MTUS2Q5JR59 1369 aa19.08■□□□□ 0.65
C3orf49-202ENST00000491896 DENND4BO75064 1496 aaPredicted RBP19.08■□□□□ 0.64
C3orf49-202ENST00000491896 ARHGAP5Q13017 1502 aa19.07■□□□□ 0.64
C3orf49-202ENST00000491896 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
C3orf49-202ENST00000491896 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
C3orf49-202ENST00000491896 MAGI2Q86UL8 1455 aa19.07■□□□□ 0.64
C3orf49-202ENST00000491896 CDC42BPBQ9Y5S2 1711 aa19.06■□□□□ 0.64
C3orf49-202ENST00000491896 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
C3orf49-202ENST00000491896 POGZQ7Z3K3 1410 aa19.05■□□□□ 0.64
C3orf49-202ENST00000491896 ARHGEF40Q8TER5 1519 aa19.05■□□□□ 0.64
C3orf49-202ENST00000491896 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
C3orf49-202ENST00000491896 ZNF518AQ6AHZ1 1483 aa19.03■□□□□ 0.64
C3orf49-202ENST00000491896 SUPT6HQ7KZ85 1726 aaKnown RBP19.03■□□□□ 0.64
C3orf49-202ENST00000491896 ABCC1P33527 1531 aa19.03■□□□□ 0.64
C3orf49-202ENST00000491896 KDM5CP41229 1560 aa19.02■□□□□ 0.64
C3orf49-202ENST00000491896 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
C3orf49-202ENST00000491896 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
C3orf49-202ENST00000491896 LRRC9Q6ZRR7 1453 aa18.99■□□□□ 0.63
C3orf49-202ENST00000491896 SCAPERQ9BY12 1400 aa18.98■□□□□ 0.63
C3orf49-202ENST00000491896 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
C3orf49-202ENST00000491896 CCNB3Q8WWL7 1395 aa18.96■□□□□ 0.63
C3orf49-202ENST00000491896 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
C3orf49-202ENST00000491896 HECW2Q9P2P5 1572 aa18.95■□□□□ 0.62
C3orf49-202ENST00000491896 POTEDQ86YR6 584 aa18.95■□□□□ 0.62
C3orf49-202ENST00000491896 SAMD9LQ8IVG5 1584 aa18.94■□□□□ 0.62
C3orf49-202ENST00000491896 NCOA2Q15596 1464 aa18.94■□□□□ 0.62
C3orf49-202ENST00000491896 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
C3orf49-202ENST00000491896 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
C3orf49-202ENST00000491896 RAPGEF3O95398 923 aa18.92■□□□□ 0.62
C3orf49-202ENST00000491896 PPP4R3CPQ6ZMV5 832 aa18.92■□□□□ 0.62
C3orf49-202ENST00000491896 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
C3orf49-202ENST00000491896 ARHGEF12Q9NZN5 1544 aa18.87■□□□□ 0.61
C3orf49-202ENST00000491896 CFDP1Q9UEE9 299 aaPredicted RBP18.87■□□□□ 0.61
C3orf49-202ENST00000491896 MIA2Q96PC5 1412 aa18.86■□□□□ 0.61
C3orf49-202ENST00000491896 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
C3orf49-202ENST00000491896 INO80Q9ULG1 1556 aaPredicted RBP18.85■□□□□ 0.61
C3orf49-202ENST00000491896 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
C3orf49-202ENST00000491896 APLP2Q06481 763 aa18.84■□□□□ 0.61
C3orf49-202ENST00000491896 DIP2CQ9Y2E4 1556 aa18.84■□□□□ 0.61
C3orf49-202ENST00000491896 ATP10AO60312 1499 aa18.84■□□□□ 0.61
C3orf49-202ENST00000491896 YEATS2Q9ULM3 1422 aa18.83■□□□□ 0.61
C3orf49-202ENST00000491896 ARHGEF5Q12774 1597 aa18.83■□□□□ 0.6
C3orf49-202ENST00000491896 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.6
C3orf49-202ENST00000491896 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
C3orf49-202ENST00000491896 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
C3orf49-202ENST00000491896 MAPK8IP2Q13387 824 aaPredicted RBP18.82■□□□□ 0.6
C3orf49-202ENST00000491896 CAMSAP2Q08AD1 1489 aa18.82■□□□□ 0.6
C3orf49-202ENST00000491896 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
C3orf49-202ENST00000491896 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
C3orf49-202ENST00000491896 MBD5Q9P267 1494 aa18.81■□□□□ 0.6
C3orf49-202ENST00000491896 ABCA6Q8N139 1617 aa18.81■□□□□ 0.6
C3orf49-202ENST00000491896 AGLP35573 1532 aa18.8■□□□□ 0.6
C3orf49-202ENST00000491896 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
C3orf49-202ENST00000491896 RTEL1-TNFRSF6BF6WH68 1400 aa18.79■□□□□ 0.6
C3orf49-202ENST00000491896 CCDC141Q6ZP82 1450 aa18.78■□□□□ 0.6
C3orf49-202ENST00000491896 KDM4FA0A1W2PPD8 638 aa18.78■□□□□ 0.6
C3orf49-202ENST00000491896 RSPH4AQ5TD94 716 aa18.78■□□□□ 0.6
C3orf49-202ENST00000491896 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
C3orf49-202ENST00000491896 PLXNC1O60486 1568 aa18.76■□□□□ 0.59
C3orf49-202ENST00000491896 KANK4Q5T7N3 995 aaPredicted RBP18.75■□□□□ 0.59
C3orf49-202ENST00000491896 ADGBQ8N7X0 1667 aa18.75■□□□□ 0.59
C3orf49-202ENST00000491896 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
C3orf49-202ENST00000491896 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
C3orf49-202ENST00000491896 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
C3orf49-202ENST00000491896 ZNF777Q9ULD5 760 aaPredicted RBP18.72■□□□□ 0.59
C3orf49-202ENST00000491896 TCOF1Q13428 1488 aaKnown RBP18.71■□□□□ 0.59
C3orf49-202ENST00000491896 SHANK2Q9UPX8 1470 aa18.71■□□□□ 0.59
C3orf49-202ENST00000491896 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
C3orf49-202ENST00000491896 MADDQ8WXG6 1647 aa18.71■□□□□ 0.58
C3orf49-202ENST00000491896 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
C3orf49-202ENST00000491896 PTPN23Q9H3S7 1636 aa18.69■□□□□ 0.58
C3orf49-202ENST00000491896 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
C3orf49-202ENST00000491896 FER1L4A9Z1Z3 1794 aa18.68■□□□□ 0.58
C3orf49-202ENST00000491896 HNRNPMP52272 730 aaKnown RBP eCLIP18.67■□□□□ 0.58
C3orf49-202ENST00000491896 A2MP01023 1474 aa18.66■□□□□ 0.58
C3orf49-202ENST00000491896 PTPRMP28827 1452 aa18.66■□□□□ 0.58
C3orf49-202ENST00000491896 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
C3orf49-202ENST00000491896 ZNF644Q9H582 1327 aaPredicted RBP18.66■□□□□ 0.58
C3orf49-202ENST00000491896 DNMT1P26358 1616 aaKnown RBP18.65■□□□□ 0.58
C3orf49-202ENST00000491896 CNTLNQ9NXG0 1405 aa18.63■□□□□ 0.57
C3orf49-202ENST00000491896 RIMS1Q86UR5 1692 aaKnown RBP18.63■□□□□ 0.57
C3orf49-202ENST00000491896 EIF2AK4Q9P2K8 1649 aaKnown RBP18.62■□□□□ 0.57
C3orf49-202ENST00000491896 MROH2AA6NES4 1674 aa18.62■□□□□ 0.57
C3orf49-202ENST00000491896 MYT1LQ9UL68 1186 aa18.61■□□□□ 0.57
C3orf49-202ENST00000491896 TSPY4P0CV99 314 aa18.59■□□□□ 0.57
C3orf49-202ENST00000491896 TSPY10P0CW01 314 aa18.59■□□□□ 0.57
C3orf49-202ENST00000491896 DHX29Q7Z478 1369 aaKnown RBP18.58■□□□□ 0.57
C3orf49-202ENST00000491896 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.57
C3orf49-202ENST00000491896 DAPK1P53355 1430 aa18.57■□□□□ 0.56
C3orf49-202ENST00000491896 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
C3orf49-202ENST00000491896 RNF17Q9BXT8 1623 aaKnown RBP18.56■□□□□ 0.56
C3orf49-202ENST00000491896 DUOX2Q9NRD8 1548 aa18.55■□□□□ 0.56
C3orf49-202ENST00000491896 ABCC5O15440 1437 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms