RNA–Protein interactions for RNA: ENST00000491680.6

LCLAT1-211, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,610 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-211ENST00000491680 ARAP3Q8WWN8 1544 aa17.44■□□□□ 0.38
LCLAT1-211ENST00000491680 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
LCLAT1-211ENST00000491680 FANCAO15360 1455 aa17.43■□□□□ 0.38
LCLAT1-211ENST00000491680 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
LCLAT1-211ENST00000491680 PLCH2O75038 1416 aa17.4■□□□□ 0.38
LCLAT1-211ENST00000491680 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
LCLAT1-211ENST00000491680 ARHGAP5Q13017 1502 aa17.37■□□□□ 0.37
LCLAT1-211ENST00000491680 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
LCLAT1-211ENST00000491680 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
LCLAT1-211ENST00000491680 DENND4BO75064 1496 aaPredicted RBP17.36■□□□□ 0.37
LCLAT1-211ENST00000491680 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
LCLAT1-211ENST00000491680 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
LCLAT1-211ENST00000491680 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
LCLAT1-211ENST00000491680 ADGRL1O94910 1474 aa17.35■□□□□ 0.37
LCLAT1-211ENST00000491680 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
LCLAT1-211ENST00000491680 RICTORQ6R327 1708 aa17.35■□□□□ 0.37
LCLAT1-211ENST00000491680 FRMPD1Q5SYB0 1578 aa17.34■□□□□ 0.37
LCLAT1-211ENST00000491680 CDC42BPAQ5VT25 1732 aa17.34■□□□□ 0.37
LCLAT1-211ENST00000491680 EHBP1L1Q8N3D4 1523 aa17.33■□□□□ 0.37
LCLAT1-211ENST00000491680 FBXO41Q8TF61 875 aa17.32■□□□□ 0.36
LCLAT1-211ENST00000491680 SCAPERQ9BY12 1400 aa17.3■□□□□ 0.36
LCLAT1-211ENST00000491680 FOXD1Q16676 465 aa17.28■□□□□ 0.36
LCLAT1-211ENST00000491680 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
LCLAT1-211ENST00000491680 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
LCLAT1-211ENST00000491680 POGZQ7Z3K3 1410 aa17.26■□□□□ 0.35
LCLAT1-211ENST00000491680 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
LCLAT1-211ENST00000491680 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
LCLAT1-211ENST00000491680 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
LCLAT1-211ENST00000491680 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
LCLAT1-211ENST00000491680 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
LCLAT1-211ENST00000491680 ZNF518AQ6AHZ1 1483 aa17.23■□□□□ 0.35
LCLAT1-211ENST00000491680 ABCC1P33527 1531 aa17.23■□□□□ 0.35
LCLAT1-211ENST00000491680 ZFYVE16Q7Z3T8 1539 aa17.23■□□□□ 0.35
LCLAT1-211ENST00000491680 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 MAGI2Q86UL8 1455 aa17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 HECW2Q9P2P5 1572 aa17.21■□□□□ 0.35
LCLAT1-211ENST00000491680 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
LCLAT1-211ENST00000491680 LMTK3Q96Q04 1460 aa17.19■□□□□ 0.34
LCLAT1-211ENST00000491680 ARID4BQ4LE39 1312 aaPredicted RBP17.19■□□□□ 0.34
LCLAT1-211ENST00000491680 KDM5CP41229 1560 aa17.19■□□□□ 0.34
LCLAT1-211ENST00000491680 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
LCLAT1-211ENST00000491680 AFAP1Q8N556 730 aa17.18■□□□□ 0.34
LCLAT1-211ENST00000491680 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
LCLAT1-211ENST00000491680 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
LCLAT1-211ENST00000491680 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
LCLAT1-211ENST00000491680 TRAPPC8Q9Y2L5 1435 aa17.16■□□□□ 0.34
LCLAT1-211ENST00000491680 CCER1Q8TC90 406 aaPredicted RBP17.15■□□□□ 0.34
LCLAT1-211ENST00000491680 BCORL1Q5H9F3 1711 aa17.14■□□□□ 0.33
LCLAT1-211ENST00000491680 HNRNPMP52272 730 aaKnown RBP eCLIP17.13■□□□□ 0.33
LCLAT1-211ENST00000491680 ATP10AO60312 1499 aa17.13■□□□□ 0.33
LCLAT1-211ENST00000491680 MLH3Q9UHC1 1453 aa17.12■□□□□ 0.33
LCLAT1-211ENST00000491680 C9orf84Q5VXU9 1444 aa17.12■□□□□ 0.33
LCLAT1-211ENST00000491680 KIAA1107Q9UPP5 1409 aa17.12■□□□□ 0.33
LCLAT1-211ENST00000491680 ADRA2BP18089 450 aa17.11■□□□□ 0.33
LCLAT1-211ENST00000491680 SIGLEC1Q9BZZ2 1709 aa17.11■□□□□ 0.33
LCLAT1-211ENST00000491680 ADAMTSL3P82987 1691 aa17.11■□□□□ 0.33
LCLAT1-211ENST00000491680 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
LCLAT1-211ENST00000491680 SOCS7O14512 581 aa17.1■□□□□ 0.33
LCLAT1-211ENST00000491680 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
LCLAT1-211ENST00000491680 KIDINS220Q9ULH0 1771 aa17.1■□□□□ 0.33
LCLAT1-211ENST00000491680 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
LCLAT1-211ENST00000491680 CAMSAP2Q08AD1 1489 aa17.08■□□□□ 0.33
LCLAT1-211ENST00000491680 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
LCLAT1-211ENST00000491680 FGD6Q6ZV73 1430 aa17.08■□□□□ 0.32
LCLAT1-211ENST00000491680 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
LCLAT1-211ENST00000491680 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
LCLAT1-211ENST00000491680 PPP6R1Q9UPN7 881 aa17.07■□□□□ 0.32
LCLAT1-211ENST00000491680 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
LCLAT1-211ENST00000491680 MLECQ14165 292 aa17.06■□□□□ 0.32
LCLAT1-211ENST00000491680 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
LCLAT1-211ENST00000491680 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
LCLAT1-211ENST00000491680 REREQ9P2R6 1566 aa17.05■□□□□ 0.32
LCLAT1-211ENST00000491680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.05■□□□□ 0.32
LCLAT1-211ENST00000491680 FER1L4A9Z1Z3 1794 aa17.04■□□□□ 0.32
LCLAT1-211ENST00000491680 MBD5Q9P267 1494 aa17.04■□□□□ 0.32
LCLAT1-211ENST00000491680 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
LCLAT1-211ENST00000491680 MIA2Q96PC5 1412 aa17.02■□□□□ 0.31
LCLAT1-211ENST00000491680 PTPRMP28827 1452 aa17.01■□□□□ 0.31
LCLAT1-211ENST00000491680 ADGBQ8N7X0 1667 aa17■□□□□ 0.31
LCLAT1-211ENST00000491680 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
LCLAT1-211ENST00000491680 RSPH4AQ5TD94 716 aa17■□□□□ 0.31
LCLAT1-211ENST00000491680 TCOF1Q13428 1488 aaKnown RBP17■□□□□ 0.31
LCLAT1-211ENST00000491680 FAM50AQ14320 339 aaKnown RBP16.99■□□□□ 0.31
LCLAT1-211ENST00000491680 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
LCLAT1-211ENST00000491680 AGLP35573 1532 aa16.98■□□□□ 0.31
LCLAT1-211ENST00000491680 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
LCLAT1-211ENST00000491680 RTEL1-TNFRSF6BF6WH68 1400 aa16.97■□□□□ 0.31
LCLAT1-211ENST00000491680 ILDR2Q71H61 639 aa16.97■□□□□ 0.31
LCLAT1-211ENST00000491680 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
LCLAT1-211ENST00000491680 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
LCLAT1-211ENST00000491680 A2MP01023 1474 aa16.96■□□□□ 0.31
LCLAT1-211ENST00000491680 ESF1Q9H501 851 aaKnown RBP16.94■□□□□ 0.3
LCLAT1-211ENST00000491680 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
LCLAT1-211ENST00000491680 ITGAEP38570 1179 aa16.93■□□□□ 0.3
LCLAT1-211ENST00000491680 PTPRKQ15262 1439 aa16.92■□□□□ 0.3
LCLAT1-211ENST00000491680 MAST1Q9Y2H9 1570 aa16.91■□□□□ 0.3
LCLAT1-211ENST00000491680 CROCC2H7BZ55 1655 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms