RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 MADDQ8WXG6 1647 aa16.52■□□□□ 0.24
SNAP47-211ENST00000491439 ARID4BQ4LE39 1312 aaPredicted RBP16.52■□□□□ 0.24
SNAP47-211ENST00000491439 CLIP1P30622 1438 aa16.52■□□□□ 0.23
SNAP47-211ENST00000491439 PCF11O94913 1555 aaKnown RBP16.51■□□□□ 0.23
SNAP47-211ENST00000491439 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
SNAP47-211ENST00000491439 LRRIQ1Q96JM4 1722 aa16.5■□□□□ 0.23
SNAP47-211ENST00000491439 MYO5CQ9NQX4 1742 aa16.5■□□□□ 0.23
SNAP47-211ENST00000491439 CCDC18Q5T9S5 1454 aa16.49■□□□□ 0.23
SNAP47-211ENST00000491439 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
SNAP47-211ENST00000491439 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
SNAP47-211ENST00000491439 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.23
SNAP47-211ENST00000491439 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
SNAP47-211ENST00000491439 KDM5CP41229 1560 aa16.45■□□□□ 0.22
SNAP47-211ENST00000491439 ATP10AO60312 1499 aa16.44■□□□□ 0.22
SNAP47-211ENST00000491439 LMTK3Q96Q04 1460 aa16.43■□□□□ 0.22
SNAP47-211ENST00000491439 ILDR1Q86SU0 546 aaPredicted RBP16.43■□□□□ 0.22
SNAP47-211ENST00000491439 C9orf84Q5VXU9 1444 aa16.43■□□□□ 0.22
SNAP47-211ENST00000491439 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
SNAP47-211ENST00000491439 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
SNAP47-211ENST00000491439 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
SNAP47-211ENST00000491439 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
SNAP47-211ENST00000491439 ABCC1P33527 1531 aa16.4■□□□□ 0.22
SNAP47-211ENST00000491439 MLH3Q9UHC1 1453 aa16.39■□□□□ 0.21
SNAP47-211ENST00000491439 CDC42BPBQ9Y5S2 1711 aa16.39■□□□□ 0.21
SNAP47-211ENST00000491439 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
SNAP47-211ENST00000491439 TRAPPC8Q9Y2L5 1435 aa16.37■□□□□ 0.21
SNAP47-211ENST00000491439 MLECQ14165 292 aa16.37■□□□□ 0.21
SNAP47-211ENST00000491439 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
SNAP47-211ENST00000491439 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
SNAP47-211ENST00000491439 GPATCH8Q9UKJ3 1502 aaKnown RBP16.34■□□□□ 0.21
SNAP47-211ENST00000491439 ITSN2Q9NZM3 1697 aa16.33■□□□□ 0.2
SNAP47-211ENST00000491439 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
SNAP47-211ENST00000491439 CDC42BPAQ5VT25 1732 aa16.32■□□□□ 0.2
SNAP47-211ENST00000491439 AGLP35573 1532 aa16.31■□□□□ 0.2
SNAP47-211ENST00000491439 SAMD9LQ8IVG5 1584 aa16.3■□□□□ 0.2
SNAP47-211ENST00000491439 HSPA2P54652 639 aa16.29■□□□□ 0.2
SNAP47-211ENST00000491439 PLPPR3Q6T4P5 718 aa16.29■□□□□ 0.2
SNAP47-211ENST00000491439 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
SNAP47-211ENST00000491439 SYCP2Q9BX26 1530 aa16.28■□□□□ 0.2
SNAP47-211ENST00000491439 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
SNAP47-211ENST00000491439 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
SNAP47-211ENST00000491439 KIAA1107Q9UPP5 1409 aa16.27■□□□□ 0.19
SNAP47-211ENST00000491439 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
SNAP47-211ENST00000491439 CEBPAP49715 358 aaPredicted RBP16.26■□□□□ 0.19
SNAP47-211ENST00000491439 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
SNAP47-211ENST00000491439 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
SNAP47-211ENST00000491439 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
SNAP47-211ENST00000491439 CFDP1Q9UEE9 299 aaPredicted RBP16.24■□□□□ 0.19
SNAP47-211ENST00000491439 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
SNAP47-211ENST00000491439 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNAP47-211ENST00000491439 SPAG9O60271 1321 aaKnown RBP16.22■□□□□ 0.19
SNAP47-211ENST00000491439 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
SNAP47-211ENST00000491439 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.19
SNAP47-211ENST00000491439 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
SNAP47-211ENST00000491439 FBXO41Q8TF61 875 aa16.21■□□□□ 0.19
SNAP47-211ENST00000491439 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
SNAP47-211ENST00000491439 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
SNAP47-211ENST00000491439 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
SNAP47-211ENST00000491439 MBD5Q9P267 1494 aa16.19■□□□□ 0.18
SNAP47-211ENST00000491439 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
SNAP47-211ENST00000491439 ZNF644Q9H582 1327 aaPredicted RBP16.18■□□□□ 0.18
SNAP47-211ENST00000491439 C3P01024 1663 aa16.17■□□□□ 0.18
SNAP47-211ENST00000491439 A2MP01023 1474 aa16.16■□□□□ 0.18
SNAP47-211ENST00000491439 ESF1Q9H501 851 aaKnown RBP16.14■□□□□ 0.17
SNAP47-211ENST00000491439 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
SNAP47-211ENST00000491439 RTEL1-TNFRSF6BF6WH68 1400 aa16.12■□□□□ 0.17
SNAP47-211ENST00000491439 NPATQ14207 1427 aa16.12■□□□□ 0.17
SNAP47-211ENST00000491439 VPS8Q8N3P4 1428 aa16.12■□□□□ 0.17
SNAP47-211ENST00000491439 MROH2AA6NES4 1674 aa16.11■□□□□ 0.17
SNAP47-211ENST00000491439 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
SNAP47-211ENST00000491439 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
SNAP47-211ENST00000491439 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
SNAP47-211ENST00000491439 SUPT6HQ7KZ85 1726 aaKnown RBP16.09■□□□□ 0.17
SNAP47-211ENST00000491439 LOC105371045A0A1W2PR82 267 aa16.09■□□□□ 0.17
SNAP47-211ENST00000491439 CCDC141Q6ZP82 1450 aa16.09■□□□□ 0.17
SNAP47-211ENST00000491439 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
SNAP47-211ENST00000491439 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
SNAP47-211ENST00000491439 LRRC9Q6ZRR7 1453 aa16.08■□□□□ 0.16
SNAP47-211ENST00000491439 ADGBQ8N7X0 1667 aa16.08■□□□□ 0.16
SNAP47-211ENST00000491439 DHX29Q7Z478 1369 aaKnown RBP16.07■□□□□ 0.16
SNAP47-211ENST00000491439 PTPRTO14522 1441 aa16.07■□□□□ 0.16
SNAP47-211ENST00000491439 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
SNAP47-211ENST00000491439 PTPRKQ15262 1439 aa16.06■□□□□ 0.16
SNAP47-211ENST00000491439 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
SNAP47-211ENST00000491439 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
SNAP47-211ENST00000491439 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
SNAP47-211ENST00000491439 GGT6Q6P531 493 aa16.05■□□□□ 0.16
SNAP47-211ENST00000491439 CLTCQ00610 1675 aaKnown RBP16.05■□□□□ 0.16
SNAP47-211ENST00000491439 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
SNAP47-211ENST00000491439 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
SNAP47-211ENST00000491439 MYO3AQ8NEV4 1616 aa16.01■□□□□ 0.15
SNAP47-211ENST00000491439 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
SNAP47-211ENST00000491439 CAMSAP1Q5T5Y3 1602 aa16■□□□□ 0.15
SNAP47-211ENST00000491439 FAM135AQ9P2D6 1515 aa15.99■□□□□ 0.15
SNAP47-211ENST00000491439 ZNF142P52746 1687 aaPredicted RBP15.99■□□□□ 0.15
SNAP47-211ENST00000491439 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
SNAP47-211ENST00000491439 CEP170BQ9Y4F5 1589 aaPredicted RBP15.98■□□□□ 0.15
SNAP47-211ENST00000491439 MYOM3Q5VTT5 1437 aa15.97■□□□□ 0.15
SNAP47-211ENST00000491439 MIA2Q96PC5 1412 aa15.97■□□□□ 0.15
SNAP47-211ENST00000491439 KIF3BO15066 747 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms