RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 PREX2Q70Z35 1606 aa14□□□□□ -0.17
GABRE-211ENST00000491339 ZMYM4Q5VZL5 1548 aa14□□□□□ -0.17
GABRE-211ENST00000491339 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
GABRE-211ENST00000491339 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
GABRE-211ENST00000491339 PLCH2O75038 1416 aa13.99□□□□□ -0.17
GABRE-211ENST00000491339 CEP162Q5TB80 1403 aa13.98□□□□□ -0.17
GABRE-211ENST00000491339 CDC42BPBQ9Y5S2 1711 aa13.97□□□□□ -0.17
GABRE-211ENST00000491339 ZFYVE16Q7Z3T8 1539 aa13.96□□□□□ -0.17
GABRE-211ENST00000491339 RAPGEF3O95398 923 aa13.96□□□□□ -0.17
GABRE-211ENST00000491339 CDC42BPAQ5VT25 1732 aa13.96□□□□□ -0.18
GABRE-211ENST00000491339 POGZQ7Z3K3 1410 aa13.95□□□□□ -0.18
GABRE-211ENST00000491339 BCORL1Q5H9F3 1711 aa13.94□□□□□ -0.18
GABRE-211ENST00000491339 MAGI2Q86UL8 1455 aa13.94□□□□□ -0.18
GABRE-211ENST00000491339 ITSN2Q9NZM3 1697 aa13.93□□□□□ -0.18
GABRE-211ENST00000491339 SCAPERQ9BY12 1400 aa13.93□□□□□ -0.18
GABRE-211ENST00000491339 EFCAB2Q5VUJ9 269 aa13.92□□□□□ -0.18
GABRE-211ENST00000491339 ZNF518AQ6AHZ1 1483 aa13.92□□□□□ -0.18
GABRE-211ENST00000491339 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
GABRE-211ENST00000491339 ADAMTSL3P82987 1691 aa13.91□□□□□ -0.18
GABRE-211ENST00000491339 ABCC1P33527 1531 aa13.91□□□□□ -0.18
GABRE-211ENST00000491339 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
GABRE-211ENST00000491339 KDM5CP41229 1560 aa13.9□□□□□ -0.18
GABRE-211ENST00000491339 MTUS2Q5JR59 1369 aa13.89□□□□□ -0.19
GABRE-211ENST00000491339 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
GABRE-211ENST00000491339 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
GABRE-211ENST00000491339 RIMS1Q86UR5 1692 aaKnown RBP13.87□□□□□ -0.19
GABRE-211ENST00000491339 FER1L4A9Z1Z3 1794 aa13.86□□□□□ -0.19
GABRE-211ENST00000491339 YEATS2Q9ULM3 1422 aa13.86□□□□□ -0.19
GABRE-211ENST00000491339 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
GABRE-211ENST00000491339 C9orf84Q5VXU9 1444 aa13.85□□□□□ -0.19
GABRE-211ENST00000491339 SAMD9LQ8IVG5 1584 aa13.85□□□□□ -0.19
GABRE-211ENST00000491339 SIGLEC1Q9BZZ2 1709 aa13.84□□□□□ -0.19
GABRE-211ENST00000491339 TIAM1Q13009 1591 aa13.84□□□□□ -0.19
GABRE-211ENST00000491339 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
GABRE-211ENST00000491339 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 SYCP2Q9BX26 1530 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 ATP10AO60312 1499 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 PLEKHH2Q8IVE3 1493 aa13.83□□□□□ -0.2
GABRE-211ENST00000491339 REREQ9P2R6 1566 aa13.82□□□□□ -0.2
GABRE-211ENST00000491339 PTPRMP28827 1452 aa13.82□□□□□ -0.2
GABRE-211ENST00000491339 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
GABRE-211ENST00000491339 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
GABRE-211ENST00000491339 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
GABRE-211ENST00000491339 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
GABRE-211ENST00000491339 ARHGEF12Q9NZN5 1544 aa13.79□□□□□ -0.2
GABRE-211ENST00000491339 TRAPPC8Q9Y2L5 1435 aa13.78□□□□□ -0.2
GABRE-211ENST00000491339 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
GABRE-211ENST00000491339 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
GABRE-211ENST00000491339 INO80Q9ULG1 1556 aaPredicted RBP13.77□□□□□ -0.21
GABRE-211ENST00000491339 CFDP1Q9UEE9 299 aaPredicted RBP13.76□□□□□ -0.21
GABRE-211ENST00000491339 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
GABRE-211ENST00000491339 ATP7AQ04656 1500 aa13.76□□□□□ -0.21
GABRE-211ENST00000491339 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
GABRE-211ENST00000491339 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
GABRE-211ENST00000491339 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
GABRE-211ENST00000491339 AGLP35573 1532 aa13.74□□□□□ -0.21
GABRE-211ENST00000491339 ADGBQ8N7X0 1667 aa13.74□□□□□ -0.21
GABRE-211ENST00000491339 LRRC9Q6ZRR7 1453 aa13.72□□□□□ -0.21
GABRE-211ENST00000491339 MLECQ14165 292 aa13.72□□□□□ -0.21
GABRE-211ENST00000491339 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
GABRE-211ENST00000491339 SPAG9O60271 1321 aaKnown RBP13.71□□□□□ -0.21
GABRE-211ENST00000491339 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.21
GABRE-211ENST00000491339 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
GABRE-211ENST00000491339 PLXNC1O60486 1568 aa13.69□□□□□ -0.22
GABRE-211ENST00000491339 CCDC141Q6ZP82 1450 aa13.69□□□□□ -0.22
GABRE-211ENST00000491339 MROH2AA6NES4 1674 aa13.68□□□□□ -0.22
GABRE-211ENST00000491339 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.22
GABRE-211ENST00000491339 ARHGEF5Q12774 1597 aa13.67□□□□□ -0.22
GABRE-211ENST00000491339 C3P01024 1663 aa13.67□□□□□ -0.22
GABRE-211ENST00000491339 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
GABRE-211ENST00000491339 A2MP01023 1474 aa13.66□□□□□ -0.22
GABRE-211ENST00000491339 APLP2Q06481 763 aa13.66□□□□□ -0.22
GABRE-211ENST00000491339 ESF1Q9H501 851 aaKnown RBP13.66□□□□□ -0.22
GABRE-211ENST00000491339 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
GABRE-211ENST00000491339 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
GABRE-211ENST00000491339 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
GABRE-211ENST00000491339 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
GABRE-211ENST00000491339 MYOM3Q5VTT5 1437 aa13.63□□□□□ -0.23
GABRE-211ENST00000491339 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
GABRE-211ENST00000491339 ZNF644Q9H582 1327 aaPredicted RBP13.62□□□□□ -0.23
GABRE-211ENST00000491339 MIA2Q96PC5 1412 aa13.62□□□□□ -0.23
GABRE-211ENST00000491339 CROCC2H7BZ55 1655 aa13.62□□□□□ -0.23
GABRE-211ENST00000491339 SETD1BQ9UPS6 1966 aaKnown RBP13.61□□□□□ -0.23
GABRE-211ENST00000491339 MAST1Q9Y2H9 1570 aa13.61□□□□□ -0.23
GABRE-211ENST00000491339 RSPH4AQ5TD94 716 aa13.6□□□□□ -0.23
GABRE-211ENST00000491339 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
GABRE-211ENST00000491339 FAM135AQ9P2D6 1515 aa13.59□□□□□ -0.23
GABRE-211ENST00000491339 PTPN23Q9H3S7 1636 aa13.59□□□□□ -0.23
GABRE-211ENST00000491339 KANK4Q5T7N3 995 aaPredicted RBP13.57□□□□□ -0.24
GABRE-211ENST00000491339 EIF2AK4Q9P2K8 1649 aaKnown RBP13.57□□□□□ -0.24
GABRE-211ENST00000491339 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
GABRE-211ENST00000491339 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
GABRE-211ENST00000491339 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
GABRE-211ENST00000491339 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
GABRE-211ENST00000491339 KDM5DQ9BY66 1539 aa13.55□□□□□ -0.24
GABRE-211ENST00000491339 NPATQ14207 1427 aa13.55□□□□□ -0.24
GABRE-211ENST00000491339 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
GABRE-211ENST00000491339 ZC3H13Q5T200 1668 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 153.7 ms