RNA–Protein interactions for RNA: ENST00000491311.1

CDK11A-219, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-219ENST00000491311 PLCH2O75038 1416 aa23.32■■□□□ 1.32
CDK11A-219ENST00000491311 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
CDK11A-219ENST00000491311 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
CDK11A-219ENST00000491311 FGD6Q6ZV73 1430 aa23.3■■□□□ 1.32
CDK11A-219ENST00000491311 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
CDK11A-219ENST00000491311 SAMD9LQ8IVG5 1584 aa23.28■■□□□ 1.32
CDK11A-219ENST00000491311 CFAP74Q9C0B2 1584 aa23.28■■□□□ 1.32
CDK11A-219ENST00000491311 FANCAO15360 1455 aa23.28■■□□□ 1.32
CDK11A-219ENST00000491311 ARAP3Q8WWN8 1544 aa23.28■■□□□ 1.32
CDK11A-219ENST00000491311 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
CDK11A-219ENST00000491311 ZNF644Q9H582 1327 aaPredicted RBP23.24■■□□□ 1.31
CDK11A-219ENST00000491311 MIA2Q96PC5 1412 aa23.24■■□□□ 1.31
CDK11A-219ENST00000491311 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
CDK11A-219ENST00000491311 TEX14Q8IWB6 1497 aa23.22■■□□□ 1.31
CDK11A-219ENST00000491311 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
CDK11A-219ENST00000491311 ABCC1P33527 1531 aa23.2■■□□□ 1.3
CDK11A-219ENST00000491311 SYCP2Q9BX26 1530 aa23.2■■□□□ 1.3
CDK11A-219ENST00000491311 RRBP1Q9P2E9 1410 aaKnown RBP23.2■■□□□ 1.3
CDK11A-219ENST00000491311 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
CDK11A-219ENST00000491311 AKNAQ7Z591 1439 aa23.18■■□□□ 1.3
CDK11A-219ENST00000491311 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
CDK11A-219ENST00000491311 NEO1Q92859 1461 aa23.17■■□□□ 1.3
CDK11A-219ENST00000491311 ARHGEF12Q9NZN5 1544 aa23.15■■□□□ 1.3
CDK11A-219ENST00000491311 PLEKHH2Q8IVE3 1493 aa23.13■■□□□ 1.29
CDK11A-219ENST00000491311 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDK11A-219ENST00000491311 SCAPERQ9BY12 1400 aa23.12■■□□□ 1.29
CDK11A-219ENST00000491311 CROCC2H7BZ55 1655 aa23.12■■□□□ 1.29
CDK11A-219ENST00000491311 DNMT1P26358 1616 aaKnown RBP23.11■■□□□ 1.29
CDK11A-219ENST00000491311 ITGAEP38570 1179 aa23.1■■□□□ 1.29
CDK11A-219ENST00000491311 ARHGEF5Q12774 1597 aa23.09■■□□□ 1.29
CDK11A-219ENST00000491311 RICTORQ6R327 1708 aa23.08■■□□□ 1.29
CDK11A-219ENST00000491311 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
CDK11A-219ENST00000491311 MBD5Q9P267 1494 aa23.07■■□□□ 1.28
CDK11A-219ENST00000491311 KIAA1107Q9UPP5 1409 aa23.07■■□□□ 1.28
CDK11A-219ENST00000491311 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
CDK11A-219ENST00000491311 DENND4BO75064 1496 aaPredicted RBP23.06■■□□□ 1.28
CDK11A-219ENST00000491311 KDM6BO15054 1643 aa23.06■■□□□ 1.28
CDK11A-219ENST00000491311 CCDC141Q6ZP82 1450 aa23.05■■□□□ 1.28
CDK11A-219ENST00000491311 DAPK1P53355 1430 aa23.05■■□□□ 1.28
CDK11A-219ENST00000491311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.04■■□□□ 1.28
CDK11A-219ENST00000491311 POGZQ7Z3K3 1410 aa23.04■■□□□ 1.28
CDK11A-219ENST00000491311 ABCC5O15440 1437 aa23.03■■□□□ 1.28
CDK11A-219ENST00000491311 COL17A1Q9UMD9 1497 aaPredicted RBP23.03■■□□□ 1.28
CDK11A-219ENST00000491311 RAPGEF3O95398 923 aa23.02■■□□□ 1.28
CDK11A-219ENST00000491311 TRIM26Q12899 539 aaPredicted RBP23.02■■□□□ 1.28
CDK11A-219ENST00000491311 ADGBQ8N7X0 1667 aa23.01■■□□□ 1.27
CDK11A-219ENST00000491311 AFAP1Q8N556 730 aa23.01■■□□□ 1.27
CDK11A-219ENST00000491311 ZNF518AQ6AHZ1 1483 aa23■■□□□ 1.27
CDK11A-219ENST00000491311 KDM5CP41229 1560 aa22.99■■□□□ 1.27
CDK11A-219ENST00000491311 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
CDK11A-219ENST00000491311 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
CDK11A-219ENST00000491311 HECW2Q9P2P5 1572 aa22.97■■□□□ 1.27
CDK11A-219ENST00000491311 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
CDK11A-219ENST00000491311 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
CDK11A-219ENST00000491311 MAST1Q9Y2H9 1570 aa22.96■■□□□ 1.27
CDK11A-219ENST00000491311 ATP7AQ04656 1500 aa22.95■■□□□ 1.26
CDK11A-219ENST00000491311 ZFYVE16Q7Z3T8 1539 aa22.95■■□□□ 1.26
CDK11A-219ENST00000491311 MYT1LQ9UL68 1186 aa22.95■■□□□ 1.26
CDK11A-219ENST00000491311 KIDINS220Q9ULH0 1771 aa22.95■■□□□ 1.26
CDK11A-219ENST00000491311 SHANK2Q9UPX8 1470 aa22.95■■□□□ 1.26
CDK11A-219ENST00000491311 ZMYM4Q5VZL5 1548 aa22.93■■□□□ 1.26
CDK11A-219ENST00000491311 SPAG9O60271 1321 aaKnown RBP22.93■■□□□ 1.26
CDK11A-219ENST00000491311 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
CDK11A-219ENST00000491311 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
CDK11A-219ENST00000491311 RSPH4AQ5TD94 716 aa22.92■■□□□ 1.26
CDK11A-219ENST00000491311 ABCA6Q8N139 1617 aa22.91■■□□□ 1.26
CDK11A-219ENST00000491311 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
CDK11A-219ENST00000491311 PCGF6Q9BYE7 350 aa22.88■■□□□ 1.25
CDK11A-219ENST00000491311 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
CDK11A-219ENST00000491311 YEATS2Q9ULM3 1422 aa22.87■■□□□ 1.25
CDK11A-219ENST00000491311 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
CDK11A-219ENST00000491311 MLH3Q9UHC1 1453 aa22.86■■□□□ 1.25
CDK11A-219ENST00000491311 DIP2CQ9Y2E4 1556 aa22.86■■□□□ 1.25
CDK11A-219ENST00000491311 GCC2Q8IWJ2 1684 aa22.86■■□□□ 1.25
CDK11A-219ENST00000491311 RTEL1-TNFRSF6BF6WH68 1400 aa22.84■■□□□ 1.25
CDK11A-219ENST00000491311 ARHGEF40Q8TER5 1519 aa22.84■■□□□ 1.25
CDK11A-219ENST00000491311 ANKRD30AQ9BXX3 1397 aa22.84■■□□□ 1.25
CDK11A-219ENST00000491311 NCOA1Q15788 1441 aa22.82■■□□□ 1.24
CDK11A-219ENST00000491311 ROCK1Q13464 1354 aa22.81■■□□□ 1.24
CDK11A-219ENST00000491311 KIF15Q9NS87 1388 aa22.81■■□□□ 1.24
CDK11A-219ENST00000491311 MAGI2Q86UL8 1455 aa22.8■■□□□ 1.24
CDK11A-219ENST00000491311 DUOX2Q9NRD8 1548 aa22.77■■□□□ 1.24
CDK11A-219ENST00000491311 SIGLEC1Q9BZZ2 1709 aa22.77■■□□□ 1.23
CDK11A-219ENST00000491311 NAIPQ13075 1403 aa22.76■■□□□ 1.23
CDK11A-219ENST00000491311 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
CDK11A-219ENST00000491311 A2MP01023 1474 aa22.75■■□□□ 1.23
CDK11A-219ENST00000491311 ATP10AO60312 1499 aa22.73■■□□□ 1.23
CDK11A-219ENST00000491311 AEBP2Q6ZN18 517 aaPredicted RBP22.72■■□□□ 1.23
CDK11A-219ENST00000491311 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
CDK11A-219ENST00000491311 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
CDK11A-219ENST00000491311 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
CDK11A-219ENST00000491311 REREQ9P2R6 1566 aa22.68■■□□□ 1.22
CDK11A-219ENST00000491311 DHX29Q7Z478 1369 aaKnown RBP22.68■■□□□ 1.22
CDK11A-219ENST00000491311 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
CDK11A-219ENST00000491311 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
CDK11A-219ENST00000491311 BCORL1Q5H9F3 1711 aa22.63■■□□□ 1.21
CDK11A-219ENST00000491311 KIF3BO15066 747 aa22.62■■□□□ 1.21
CDK11A-219ENST00000491311 ARID4BQ4LE39 1312 aaPredicted RBP22.61■■□□□ 1.21
CDK11A-219ENST00000491311 RNF17Q9BXT8 1623 aaKnown RBP22.61■■□□□ 1.21
CDK11A-219ENST00000491311 UNC13BO14795 1591 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms