RNA–Protein interactions for RNA: ENST00000491242.1

LRRTM4-207, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

TSL 3

Gene LRRTM4, Length 596 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-207ENST00000491242 TCOF1Q13428 1488 aaKnown RBP16.9■□□□□ 0.3
LRRTM4-207ENST00000491242 DIP2BQ9P265 1576 aa16.89■□□□□ 0.3
LRRTM4-207ENST00000491242 ABCA9Q8IUA7 1624 aa16.89■□□□□ 0.29
LRRTM4-207ENST00000491242 PREX2Q70Z35 1606 aa16.88■□□□□ 0.29
LRRTM4-207ENST00000491242 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
LRRTM4-207ENST00000491242 PLCH2O75038 1416 aa16.87■□□□□ 0.29
LRRTM4-207ENST00000491242 KIF13AQ9H1H9 1805 aa16.87■□□□□ 0.29
LRRTM4-207ENST00000491242 ITGAEP38570 1179 aa16.87■□□□□ 0.29
LRRTM4-207ENST00000491242 ZNF777Q9ULD5 760 aaPredicted RBP16.87■□□□□ 0.29
LRRTM4-207ENST00000491242 ARHGAP5Q13017 1502 aa16.86■□□□□ 0.29
LRRTM4-207ENST00000491242 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
LRRTM4-207ENST00000491242 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
LRRTM4-207ENST00000491242 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
LRRTM4-207ENST00000491242 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
LRRTM4-207ENST00000491242 ARAP3Q8WWN8 1544 aa16.84■□□□□ 0.29
LRRTM4-207ENST00000491242 MAP3K4Q9Y6R4 1608 aa16.83■□□□□ 0.28
LRRTM4-207ENST00000491242 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
LRRTM4-207ENST00000491242 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
LRRTM4-207ENST00000491242 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
LRRTM4-207ENST00000491242 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
LRRTM4-207ENST00000491242 RSPH4AQ5TD94 716 aa16.78■□□□□ 0.28
LRRTM4-207ENST00000491242 HNRNPMP52272 730 aaKnown RBP eCLIP16.77■□□□□ 0.28
LRRTM4-207ENST00000491242 FANCAO15360 1455 aa16.77■□□□□ 0.28
LRRTM4-207ENST00000491242 DAPK1P53355 1430 aa16.77■□□□□ 0.27
LRRTM4-207ENST00000491242 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
LRRTM4-207ENST00000491242 ABCC5O15440 1437 aa16.76■□□□□ 0.27
LRRTM4-207ENST00000491242 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
LRRTM4-207ENST00000491242 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
LRRTM4-207ENST00000491242 TSPOAP1O95153 1857 aa16.75■□□□□ 0.27
LRRTM4-207ENST00000491242 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
LRRTM4-207ENST00000491242 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
LRRTM4-207ENST00000491242 TEX14Q8IWB6 1497 aa16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 MBD5Q9P267 1494 aa16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 PPRC1Q5VV67 1664 aaKnown RBP16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
LRRTM4-207ENST00000491242 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
LRRTM4-207ENST00000491242 ABCC1P33527 1531 aa16.71■□□□□ 0.27
LRRTM4-207ENST00000491242 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
LRRTM4-207ENST00000491242 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
LRRTM4-207ENST00000491242 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
LRRTM4-207ENST00000491242 NEO1Q92859 1461 aa16.7■□□□□ 0.26
LRRTM4-207ENST00000491242 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
LRRTM4-207ENST00000491242 ARHGEF12Q9NZN5 1544 aa16.69■□□□□ 0.26
LRRTM4-207ENST00000491242 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
LRRTM4-207ENST00000491242 ADGRL1O94910 1474 aa16.68■□□□□ 0.26
LRRTM4-207ENST00000491242 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
LRRTM4-207ENST00000491242 SCAPERQ9BY12 1400 aa16.68■□□□□ 0.26
LRRTM4-207ENST00000491242 ADGBQ8N7X0 1667 aa16.66■□□□□ 0.26
LRRTM4-207ENST00000491242 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
LRRTM4-207ENST00000491242 C9orf84Q5VXU9 1444 aa16.66■□□□□ 0.26
LRRTM4-207ENST00000491242 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
LRRTM4-207ENST00000491242 ANKRD30AQ9BXX3 1397 aa16.65■□□□□ 0.26
LRRTM4-207ENST00000491242 TRAPPC8Q9Y2L5 1435 aa16.65■□□□□ 0.26
LRRTM4-207ENST00000491242 HRCP23327 699 aa16.65■□□□□ 0.26
LRRTM4-207ENST00000491242 ADGRL2O95490 1459 aa16.65■□□□□ 0.26
LRRTM4-207ENST00000491242 NAIPQ13075 1403 aa16.64■□□□□ 0.25
LRRTM4-207ENST00000491242 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
LRRTM4-207ENST00000491242 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
LRRTM4-207ENST00000491242 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.25
LRRTM4-207ENST00000491242 AFAP1Q8N556 730 aa16.63■□□□□ 0.25
LRRTM4-207ENST00000491242 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
LRRTM4-207ENST00000491242 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
LRRTM4-207ENST00000491242 RTEL1-TNFRSF6BF6WH68 1400 aa16.6■□□□□ 0.25
LRRTM4-207ENST00000491242 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
LRRTM4-207ENST00000491242 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
LRRTM4-207ENST00000491242 DENND4BO75064 1496 aaPredicted RBP16.59■□□□□ 0.25
LRRTM4-207ENST00000491242 POGZQ7Z3K3 1410 aa16.58■□□□□ 0.24
LRRTM4-207ENST00000491242 KIF15Q9NS87 1388 aa16.57■□□□□ 0.24
LRRTM4-207ENST00000491242 MYT1LQ9UL68 1186 aa16.57■□□□□ 0.24
LRRTM4-207ENST00000491242 PLXNC1O60486 1568 aa16.56■□□□□ 0.24
LRRTM4-207ENST00000491242 RAPGEF3O95398 923 aa16.55■□□□□ 0.24
LRRTM4-207ENST00000491242 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
LRRTM4-207ENST00000491242 KDM6BO15054 1643 aa16.54■□□□□ 0.24
LRRTM4-207ENST00000491242 KDM5CP41229 1560 aa16.54■□□□□ 0.24
LRRTM4-207ENST00000491242 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
LRRTM4-207ENST00000491242 ANKRD50Q9ULJ7 1429 aa16.53■□□□□ 0.24
LRRTM4-207ENST00000491242 RICTORQ6R327 1708 aa16.53■□□□□ 0.24
LRRTM4-207ENST00000491242 INO80Q9ULG1 1556 aaPredicted RBP16.53■□□□□ 0.24
LRRTM4-207ENST00000491242 ZFYVE16Q7Z3T8 1539 aa16.53■□□□□ 0.24
LRRTM4-207ENST00000491242 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
LRRTM4-207ENST00000491242 DUOX2Q9NRD8 1548 aa16.51■□□□□ 0.23
LRRTM4-207ENST00000491242 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
LRRTM4-207ENST00000491242 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
LRRTM4-207ENST00000491242 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
LRRTM4-207ENST00000491242 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
LRRTM4-207ENST00000491242 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
LRRTM4-207ENST00000491242 ZMYM4Q5VZL5 1548 aa16.49■□□□□ 0.23
LRRTM4-207ENST00000491242 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
LRRTM4-207ENST00000491242 MAGI2Q86UL8 1455 aa16.47■□□□□ 0.23
LRRTM4-207ENST00000491242 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
LRRTM4-207ENST00000491242 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
LRRTM4-207ENST00000491242 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
LRRTM4-207ENST00000491242 A2MP01023 1474 aa16.42■□□□□ 0.22
LRRTM4-207ENST00000491242 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
LRRTM4-207ENST00000491242 MPHOSPH9Q99550 1183 aa16.41■□□□□ 0.22
LRRTM4-207ENST00000491242 NUP155O75694 1391 aa16.4■□□□□ 0.22
LRRTM4-207ENST00000491242 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
LRRTM4-207ENST00000491242 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms