RNA–Protein interactions for RNA: ENST00000491203.5

CNOT4-210, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-210ENST00000491203 DNAJC5Q9H3Z4 198 aa13.65□□□□□ -0.22
CNOT4-210ENST00000491203 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
CNOT4-210ENST00000491203 CCDC61Q9Y6R9 512 aa13.64□□□□□ -0.23
CNOT4-210ENST00000491203 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
CNOT4-210ENST00000491203 DISP1Q96F81 1524 aa13.61□□□□□ -0.23
CNOT4-210ENST00000491203 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
CNOT4-210ENST00000491203 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
CNOT4-210ENST00000491203 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
CNOT4-210ENST00000491203 EFCAB5A4FU69 1503 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 CLIP1P30622 1438 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 NUBP1P53384 320 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 RIMBP3CA6NJZ7 1639 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 RIMBP3BA6NNM3 1639 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 RIMBP3Q9UFD9 1639 aa13.59□□□□□ -0.23
CNOT4-210ENST00000491203 SAMD9Q5K651 1589 aa13.58□□□□□ -0.23
CNOT4-210ENST00000491203 CEP162Q5TB80 1403 aa13.58□□□□□ -0.24
CNOT4-210ENST00000491203 MS4A3Q96HJ5 214 aa13.58□□□□□ -0.24
CNOT4-210ENST00000491203 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
CNOT4-210ENST00000491203 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
CNOT4-210ENST00000491203 TTBK1Q5TCY1 1321 aaPredicted RBP13.56□□□□□ -0.24
CNOT4-210ENST00000491203 PTPRGP23470 1445 aa13.56□□□□□ -0.24
CNOT4-210ENST00000491203 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
CNOT4-210ENST00000491203 FHOD3Q2V2M9 1422 aa13.55□□□□□ -0.24
CNOT4-210ENST00000491203 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
CNOT4-210ENST00000491203 KIF12Q96FN5 646 aa13.53□□□□□ -0.24
CNOT4-210ENST00000491203 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
CNOT4-210ENST00000491203 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
CNOT4-210ENST00000491203 LHX8Q68G74 356 aa13.48□□□□□ -0.25
CNOT4-210ENST00000491203 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
CNOT4-210ENST00000491203 ZBTB47Q9UFB7 747 aaPredicted RBP13.48□□□□□ -0.25
CNOT4-210ENST00000491203 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
CNOT4-210ENST00000491203 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
CNOT4-210ENST00000491203 MAP3K13O43283 966 aa13.46□□□□□ -0.25
CNOT4-210ENST00000491203 TRPC6Q9Y210 931 aa13.45□□□□□ -0.26
CNOT4-210ENST00000491203 PLB1Q6P1J6 1458 aa13.44□□□□□ -0.26
CNOT4-210ENST00000491203 ABCA8O94911 1581 aa13.43□□□□□ -0.26
CNOT4-210ENST00000491203 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
CNOT4-210ENST00000491203 ASTLQ6HA08 431 aaPredicted RBP13.42□□□□□ -0.26
CNOT4-210ENST00000491203 ABCC2Q92887 1545 aa13.42□□□□□ -0.26
CNOT4-210ENST00000491203 ATMINO43313 823 aaPredicted RBP13.41□□□□□ -0.26
CNOT4-210ENST00000491203 ATP1B4Q9UN42 357 aaPredicted RBP13.41□□□□□ -0.26
CNOT4-210ENST00000491203 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
CNOT4-210ENST00000491203 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.26
CNOT4-210ENST00000491203 ADCY10Q96PN6 1610 aa13.4□□□□□ -0.26
CNOT4-210ENST00000491203 CASKIN1Q8WXD9 1431 aa13.39□□□□□ -0.27
CNOT4-210ENST00000491203 PCF11O94913 1555 aaKnown RBP13.38□□□□□ -0.27
CNOT4-210ENST00000491203 ARID3CA6NKF2 412 aa13.38□□□□□ -0.27
CNOT4-210ENST00000491203 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
CNOT4-210ENST00000491203 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
CNOT4-210ENST00000491203 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
CNOT4-210ENST00000491203 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
CNOT4-210ENST00000491203 KDM5BQ9UGL1 1544 aa13.35□□□□□ -0.27
CNOT4-210ENST00000491203 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
CNOT4-210ENST00000491203 BMP2KQ9NSY1 1161 aaPredicted RBP13.35□□□□□ -0.27
CNOT4-210ENST00000491203 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-210ENST00000491203 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-210ENST00000491203 ATP10BO94823 1461 aa13.33□□□□□ -0.28
CNOT4-210ENST00000491203 EPRSP07814 1512 aaKnown RBP13.33□□□□□ -0.28
CNOT4-210ENST00000491203 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
CNOT4-210ENST00000491203 ZCCHC11Q5TAX3 1644 aaKnown RBP13.31□□□□□ -0.28
CNOT4-210ENST00000491203 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
CNOT4-210ENST00000491203 PCDHB13Q9Y5F0 798 aa13.3□□□□□ -0.28
CNOT4-210ENST00000491203 IFNL1Q8IU54 200 aa13.29□□□□□ -0.28
CNOT4-210ENST00000491203 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CNOT4-210ENST00000491203 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
CNOT4-210ENST00000491203 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
CNOT4-210ENST00000491203 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
CNOT4-210ENST00000491203 ASXL2Q76L83 1435 aa13.28□□□□□ -0.28
CNOT4-210ENST00000491203 MAPKBP1O60336 1514 aa13.28□□□□□ -0.28
CNOT4-210ENST00000491203 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
CNOT4-210ENST00000491203 TIE1P35590 1138 aa13.27□□□□□ -0.29
CNOT4-210ENST00000491203 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.29
CNOT4-210ENST00000491203 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
CNOT4-210ENST00000491203 TTLL13PA6NNM8 815 aa13.25□□□□□ -0.29
CNOT4-210ENST00000491203 PYGBP11216 843 aa13.25□□□□□ -0.29
CNOT4-210ENST00000491203 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
CNOT4-210ENST00000491203 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
CNOT4-210ENST00000491203 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
CNOT4-210ENST00000491203 POTEFA5A3E0 1075 aa13.23□□□□□ -0.29
CNOT4-210ENST00000491203 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
CNOT4-210ENST00000491203 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
CNOT4-210ENST00000491203 MTUS2Q5JR59 1369 aa13.22□□□□□ -0.29
CNOT4-210ENST00000491203 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
CNOT4-210ENST00000491203 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
CNOT4-210ENST00000491203 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
CNOT4-210ENST00000491203 C7P10643 843 aa13.21□□□□□ -0.29
CNOT4-210ENST00000491203 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
CNOT4-210ENST00000491203 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
CNOT4-210ENST00000491203 ABCC10Q5T3U5 1492 aa13.19□□□□□ -0.3
CNOT4-210ENST00000491203 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
CNOT4-210ENST00000491203 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
CNOT4-210ENST00000491203 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
CNOT4-210ENST00000491203 FAM69CQ0P6D2 419 aa13.17□□□□□ -0.3
CNOT4-210ENST00000491203 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
CNOT4-210ENST00000491203 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
CNOT4-210ENST00000491203 KIF14Q15058 1648 aa13.16□□□□□ -0.3
CNOT4-210ENST00000491203 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
CNOT4-210ENST00000491203 GSE1Q14687 1217 aa13.15□□□□□ -0.3
CNOT4-210ENST00000491203 GLI2P10070 1586 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms