RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 FANCAO15360 1455 aa16.69■□□□□ 0.26
CACNA1C-227ENST00000491104 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
CACNA1C-227ENST00000491104 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
CACNA1C-227ENST00000491104 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
CACNA1C-227ENST00000491104 SAMD9LQ8IVG5 1584 aa16.67■□□□□ 0.26
CACNA1C-227ENST00000491104 CFAP74Q9C0B2 1584 aa16.67■□□□□ 0.26
CACNA1C-227ENST00000491104 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-227ENST00000491104 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
CACNA1C-227ENST00000491104 NEO1Q92859 1461 aa16.64■□□□□ 0.25
CACNA1C-227ENST00000491104 AKNAQ7Z591 1439 aa16.63■□□□□ 0.25
CACNA1C-227ENST00000491104 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
CACNA1C-227ENST00000491104 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
CACNA1C-227ENST00000491104 CAMSAP2Q08AD1 1489 aa16.62■□□□□ 0.25
CACNA1C-227ENST00000491104 ABCC1P33527 1531 aa16.62■□□□□ 0.25
CACNA1C-227ENST00000491104 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
CACNA1C-227ENST00000491104 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
CACNA1C-227ENST00000491104 ADGRL1O94910 1474 aa16.61■□□□□ 0.25
CACNA1C-227ENST00000491104 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
CACNA1C-227ENST00000491104 MIA2Q96PC5 1412 aa16.6■□□□□ 0.25
CACNA1C-227ENST00000491104 ARHGEF12Q9NZN5 1544 aa16.6■□□□□ 0.25
CACNA1C-227ENST00000491104 KDM6BO15054 1643 aa16.59■□□□□ 0.25
CACNA1C-227ENST00000491104 COL17A1Q9UMD9 1497 aaPredicted RBP16.59■□□□□ 0.25
CACNA1C-227ENST00000491104 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
CACNA1C-227ENST00000491104 RICTORQ6R327 1708 aa16.56■□□□□ 0.24
CACNA1C-227ENST00000491104 FRMPD1Q5SYB0 1578 aa16.56■□□□□ 0.24
CACNA1C-227ENST00000491104 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-227ENST00000491104 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACNA1C-227ENST00000491104 DENND4BO75064 1496 aaPredicted RBP16.54■□□□□ 0.24
CACNA1C-227ENST00000491104 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
CACNA1C-227ENST00000491104 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
CACNA1C-227ENST00000491104 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
CACNA1C-227ENST00000491104 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
CACNA1C-227ENST00000491104 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
CACNA1C-227ENST00000491104 POGZQ7Z3K3 1410 aa16.53■□□□□ 0.24
CACNA1C-227ENST00000491104 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
CACNA1C-227ENST00000491104 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
CACNA1C-227ENST00000491104 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
CACNA1C-227ENST00000491104 CROCC2H7BZ55 1655 aa16.5■□□□□ 0.23
CACNA1C-227ENST00000491104 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
CACNA1C-227ENST00000491104 ZNF518AQ6AHZ1 1483 aa16.49■□□□□ 0.23
CACNA1C-227ENST00000491104 KDM5CP41229 1560 aa16.49■□□□□ 0.23
CACNA1C-227ENST00000491104 AFAP1Q8N556 730 aa16.49■□□□□ 0.23
CACNA1C-227ENST00000491104 CCDC141Q6ZP82 1450 aa16.48■□□□□ 0.23
CACNA1C-227ENST00000491104 DAPK1P53355 1430 aa16.47■□□□□ 0.23
CACNA1C-227ENST00000491104 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
CACNA1C-227ENST00000491104 HECW2Q9P2P5 1572 aa16.47■□□□□ 0.23
CACNA1C-227ENST00000491104 ABCC5O15440 1437 aa16.46■□□□□ 0.23
CACNA1C-227ENST00000491104 ITGAEP38570 1179 aa16.45■□□□□ 0.22
CACNA1C-227ENST00000491104 INO80Q9ULG1 1556 aaPredicted RBP16.45■□□□□ 0.22
CACNA1C-227ENST00000491104 KIDINS220Q9ULH0 1771 aa16.45■□□□□ 0.22
CACNA1C-227ENST00000491104 ZFYVE16Q7Z3T8 1539 aa16.44■□□□□ 0.22
CACNA1C-227ENST00000491104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1C-227ENST00000491104 ABCA6Q8N139 1617 aa16.43■□□□□ 0.22
CACNA1C-227ENST00000491104 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
CACNA1C-227ENST00000491104 PTPRKQ15262 1439 aa16.43■□□□□ 0.22
CACNA1C-227ENST00000491104 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
CACNA1C-227ENST00000491104 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
CACNA1C-227ENST00000491104 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
CACNA1C-227ENST00000491104 MAST1Q9Y2H9 1570 aa16.42■□□□□ 0.22
CACNA1C-227ENST00000491104 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
CACNA1C-227ENST00000491104 SHANK2Q9UPX8 1470 aa16.41■□□□□ 0.22
CACNA1C-227ENST00000491104 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
CACNA1C-227ENST00000491104 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
CACNA1C-227ENST00000491104 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
CACNA1C-227ENST00000491104 CHIC2Q9UKJ5 165 aa16.4■□□□□ 0.22
CACNA1C-227ENST00000491104 MLH3Q9UHC1 1453 aa16.4■□□□□ 0.22
CACNA1C-227ENST00000491104 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
CACNA1C-227ENST00000491104 TSPY4P0CV99 314 aa16.38■□□□□ 0.21
CACNA1C-227ENST00000491104 TSPY10P0CW01 314 aa16.38■□□□□ 0.21
CACNA1C-227ENST00000491104 MAGI2Q86UL8 1455 aa16.37■□□□□ 0.21
CACNA1C-227ENST00000491104 RTEL1-TNFRSF6BF6WH68 1400 aa16.36■□□□□ 0.21
CACNA1C-227ENST00000491104 PLXNC1O60486 1568 aa16.36■□□□□ 0.21
CACNA1C-227ENST00000491104 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
CACNA1C-227ENST00000491104 ADGRL2O95490 1459 aa16.34■□□□□ 0.21
CACNA1C-227ENST00000491104 ATP10AO60312 1499 aa16.32■□□□□ 0.2
CACNA1C-227ENST00000491104 RRP7BPQ9NSQ0 103 aa16.32■□□□□ 0.2
CACNA1C-227ENST00000491104 NCOA1Q15788 1441 aa16.31■□□□□ 0.2
CACNA1C-227ENST00000491104 ANKRD30AQ9BXX3 1397 aa16.31■□□□□ 0.2
CACNA1C-227ENST00000491104 A2MP01023 1474 aa16.3■□□□□ 0.2
CACNA1C-227ENST00000491104 KIF15Q9NS87 1388 aa16.3■□□□□ 0.2
CACNA1C-227ENST00000491104 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
CACNA1C-227ENST00000491104 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
CACNA1C-227ENST00000491104 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
CACNA1C-227ENST00000491104 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
CACNA1C-227ENST00000491104 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
CACNA1C-227ENST00000491104 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
CACNA1C-227ENST00000491104 NAIPQ13075 1403 aa16.24■□□□□ 0.19
CACNA1C-227ENST00000491104 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
CACNA1C-227ENST00000491104 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
CACNA1C-227ENST00000491104 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
CACNA1C-227ENST00000491104 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
CACNA1C-227ENST00000491104 ANKRD50Q9ULJ7 1429 aa16.22■□□□□ 0.19
CACNA1C-227ENST00000491104 AGLP35573 1532 aa16.22■□□□□ 0.19
CACNA1C-227ENST00000491104 BCORL1Q5H9F3 1711 aa16.21■□□□□ 0.19
CACNA1C-227ENST00000491104 KIF3BO15066 747 aa16.2■□□□□ 0.18
CACNA1C-227ENST00000491104 MLECQ14165 292 aa16.2■□□□□ 0.18
CACNA1C-227ENST00000491104 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
CACNA1C-227ENST00000491104 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
CACNA1C-227ENST00000491104 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
CACNA1C-227ENST00000491104 GGT6Q6P531 493 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms