RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 FGD6Q6ZV73 1430 aa28.65■■■□□ 2.18
MCF2L-230ENST00000491028 ARHGAP5Q13017 1502 aa28.64■■■□□ 2.18
MCF2L-230ENST00000491028 CFAP74Q9C0B2 1584 aa28.63■■■□□ 2.17
MCF2L-230ENST00000491028 CFDP1Q9UEE9 299 aaPredicted RBP28.6■■■□□ 2.17
MCF2L-230ENST00000491028 PTPN23Q9H3S7 1636 aa28.6■■■□□ 2.17
MCF2L-230ENST00000491028 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
MCF2L-230ENST00000491028 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
MCF2L-230ENST00000491028 TCOF1Q13428 1488 aaKnown RBP28.58■■■□□ 2.17
MCF2L-230ENST00000491028 FANCAO15360 1455 aa28.57■■■□□ 2.16
MCF2L-230ENST00000491028 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
MCF2L-230ENST00000491028 TEX14Q8IWB6 1497 aa28.56■■■□□ 2.16
MCF2L-230ENST00000491028 SAMD9LQ8IVG5 1584 aa28.55■■■□□ 2.16
MCF2L-230ENST00000491028 EFCAB2Q5VUJ9 269 aa28.55■■■□□ 2.16
MCF2L-230ENST00000491028 NEO1Q92859 1461 aa28.54■■■□□ 2.16
MCF2L-230ENST00000491028 CAMSAP2Q08AD1 1489 aa28.53■■■□□ 2.16
MCF2L-230ENST00000491028 PLEKHH2Q8IVE3 1493 aa28.52■■■□□ 2.16
MCF2L-230ENST00000491028 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.51■■■□□ 2.161e-7■■□□□ 13.6
MCF2L-230ENST00000491028 ABCC1P33527 1531 aa28.49■■■□□ 2.15
MCF2L-230ENST00000491028 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
MCF2L-230ENST00000491028 AKNAQ7Z591 1439 aa28.46■■■□□ 2.15
MCF2L-230ENST00000491028 KIAA1107Q9UPP5 1409 aa28.45■■■□□ 2.15
MCF2L-230ENST00000491028 ADGRL1O94910 1474 aa28.44■■■□□ 2.14
MCF2L-230ENST00000491028 ZNF644Q9H582 1327 aaPredicted RBP28.43■■■□□ 2.14
MCF2L-230ENST00000491028 SYCP2Q9BX26 1530 aa28.43■■■□□ 2.14
MCF2L-230ENST00000491028 ARHGEF5Q12774 1597 aa28.42■■■□□ 2.14
MCF2L-230ENST00000491028 FAM50AQ14320 339 aaKnown RBP28.41■■■□□ 2.14
MCF2L-230ENST00000491028 DNMT1P26358 1616 aaKnown RBP28.4■■■□□ 2.14
MCF2L-230ENST00000491028 MBD5Q9P267 1494 aa28.38■■■□□ 2.13
MCF2L-230ENST00000491028 ARHGEF12Q9NZN5 1544 aa28.38■■■□□ 2.13
MCF2L-230ENST00000491028 SCAPERQ9BY12 1400 aa28.36■■■□□ 2.13
MCF2L-230ENST00000491028 CROCC2H7BZ55 1655 aa28.36■■■□□ 2.13
MCF2L-230ENST00000491028 TRIM26Q12899 539 aaPredicted RBP28.36■■■□□ 2.13
MCF2L-230ENST00000491028 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
MCF2L-230ENST00000491028 RSPH4AQ5TD94 716 aa28.34■■■□□ 2.13
MCF2L-230ENST00000491028 DAPK1P53355 1430 aa28.33■■■□□ 2.13
MCF2L-230ENST00000491028 DENND4BO75064 1496 aaPredicted RBP28.32■■■□□ 2.12
MCF2L-230ENST00000491028 HNRNPMP52272 730 aaKnown RBP eCLIP28.31■■■□□ 2.12
MCF2L-230ENST00000491028 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
MCF2L-230ENST00000491028 RICTORQ6R327 1708 aa28.3■■■□□ 2.12
MCF2L-230ENST00000491028 ZNF518AQ6AHZ1 1483 aa28.3■■■□□ 2.12
MCF2L-230ENST00000491028 SHANK2Q9UPX8 1470 aa28.3■■■□□ 2.12
MCF2L-230ENST00000491028 ABCC5O15440 1437 aa28.29■■■□□ 2.12
MCF2L-230ENST00000491028 TRAPPC8Q9Y2L5 1435 aa28.29■■■□□ 2.12
MCF2L-230ENST00000491028 KDM5CP41229 1560 aa28.28■■■□□ 2.12
MCF2L-230ENST00000491028 MAST1Q9Y2H9 1570 aa28.27■■■□□ 2.12
MCF2L-230ENST00000491028 FRMPD1Q5SYB0 1578 aa28.25■■■□□ 2.11
MCF2L-230ENST00000491028 ADGBQ8N7X0 1667 aa28.24■■■□□ 2.11
MCF2L-230ENST00000491028 KDM6BO15054 1643 aa28.22■■■□□ 2.11
MCF2L-230ENST00000491028 INO80Q9ULG1 1556 aaPredicted RBP28.21■■■□□ 2.11
MCF2L-230ENST00000491028 C9orf84Q5VXU9 1444 aa28.21■■■□□ 2.11
MCF2L-230ENST00000491028 ZMYM4Q5VZL5 1548 aa28.21■■■□□ 2.11
MCF2L-230ENST00000491028 PTPRKQ15262 1439 aa28.2■■■□□ 2.11
MCF2L-230ENST00000491028 TSPY4P0CV99 314 aa28.2■■■□□ 2.1
MCF2L-230ENST00000491028 TSPY10P0CW01 314 aa28.2■■■□□ 2.1
MCF2L-230ENST00000491028 HECW2Q9P2P5 1572 aa28.2■■■□□ 2.1
MCF2L-230ENST00000491028 COL17A1Q9UMD9 1497 aaPredicted RBP28.19■■■□□ 2.1
MCF2L-230ENST00000491028 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
MCF2L-230ENST00000491028 ZFYVE16Q7Z3T8 1539 aa28.18■■■□□ 2.1
MCF2L-230ENST00000491028 ITGAEP38570 1179 aa28.18■■■□□ 2.1
MCF2L-230ENST00000491028 AFAP1Q8N556 730 aa28.18■■■□□ 2.1
MCF2L-230ENST00000491028 ADGRL2O95490 1459 aa28.18■■■□□ 2.1
MCF2L-230ENST00000491028 MLH3Q9UHC1 1453 aa28.16■■■□□ 2.1
MCF2L-230ENST00000491028 ATP7AQ04656 1500 aa28.16■■■□□ 2.1
MCF2L-230ENST00000491028 PLXNC1O60486 1568 aa28.16■■■□□ 2.1
MCF2L-230ENST00000491028 RAPGEF3O95398 923 aa28.15■■■□□ 2.1
MCF2L-230ENST00000491028 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
MCF2L-230ENST00000491028 ROCK1Q13464 1354 aa28.14■■■□□ 2.1
MCF2L-230ENST00000491028 KIDINS220Q9ULH0 1771 aa28.14■■■□□ 2.09
MCF2L-230ENST00000491028 MAGI2Q86UL8 1455 aa28.13■■■□□ 2.09
MCF2L-230ENST00000491028 ANKRD30AQ9BXX3 1397 aa28.11■■■□□ 2.09
MCF2L-230ENST00000491028 NCOA1Q15788 1441 aa28.09■■■□□ 2.09
MCF2L-230ENST00000491028 GCC2Q8IWJ2 1684 aa28.08■■■□□ 2.09
MCF2L-230ENST00000491028 CHIC2Q9UKJ5 165 aa28.08■■■□□ 2.09
MCF2L-230ENST00000491028 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
MCF2L-230ENST00000491028 ABCA6Q8N139 1617 aa28.06■■■□□ 2.08
MCF2L-230ENST00000491028 HFM1A2PYH4 1435 aa28.05■■■□□ 2.08
MCF2L-230ENST00000491028 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
MCF2L-230ENST00000491028 DIP2CQ9Y2E4 1556 aa28.03■■■□□ 2.08
MCF2L-230ENST00000491028 ARHGEF40Q8TER5 1519 aa28.03■■■□□ 2.08
MCF2L-230ENST00000491028 KIF15Q9NS87 1388 aa28.02■■■□□ 2.08
MCF2L-230ENST00000491028 MYT1LQ9UL68 1186 aa28.02■■■□□ 2.08
MCF2L-230ENST00000491028 DUOX2Q9NRD8 1548 aa28.01■■■□□ 2.07
MCF2L-230ENST00000491028 NAIPQ13075 1403 aa28■■■□□ 2.07
MCF2L-230ENST00000491028 YEATS2Q9ULM3 1422 aa27.99■■■□□ 2.07
MCF2L-230ENST00000491028 RRP7BPQ9NSQ0 103 aa27.97■■■□□ 2.07
MCF2L-230ENST00000491028 REREQ9P2R6 1566 aa27.97■■■□□ 2.07
MCF2L-230ENST00000491028 A2MP01023 1474 aa27.95■■■□□ 2.06
MCF2L-230ENST00000491028 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
MCF2L-230ENST00000491028 SETD5Q9C0A6 1442 aa27.93■■■□□ 2.06
MCF2L-230ENST00000491028 ATP10AO60312 1499 aa27.93■■■□□ 2.06
MCF2L-230ENST00000491028 ANKRD50Q9ULJ7 1429 aa27.92■■■□□ 2.06
MCF2L-230ENST00000491028 EIF2AK4Q9P2K8 1649 aaKnown RBP27.92■■■□□ 2.06
MCF2L-230ENST00000491028 DHX29Q7Z478 1369 aaKnown RBP27.91■■■□□ 2.06
MCF2L-230ENST00000491028 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.06
MCF2L-230ENST00000491028 RAB3GAP2Q9H2M9 1393 aa27.85■■■□□ 2.05
MCF2L-230ENST00000491028 AGLP35573 1532 aa27.84■■■□□ 2.05
MCF2L-230ENST00000491028 ACIN1Q9UKV3 1341 aaKnown RBP27.82■■■□□ 2.04
MCF2L-230ENST00000491028 HRCP23327 699 aa27.81■■■□□ 2.04
MCF2L-230ENST00000491028 UNC13BO14795 1591 aa27.8■■■□□ 2.04
MCF2L-230ENST00000491028 DEPDC5O75140 1603 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms