RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 ZMYM4Q5VZL5 1548 aa25.87■■□□□ 1.73
ARHGEF39-206ENST00000490970 POGZQ7Z3K3 1410 aa25.87■■□□□ 1.73
ARHGEF39-206ENST00000490970 YEATS2Q9ULM3 1422 aa25.87■■□□□ 1.73
ARHGEF39-206ENST00000490970 CEP162Q5TB80 1403 aa25.85■■□□□ 1.73
ARHGEF39-206ENST00000490970 ZFYVE16Q7Z3T8 1539 aa25.84■■□□□ 1.73
ARHGEF39-206ENST00000490970 LOC105371045A0A1W2PR82 267 aa25.84■■□□□ 1.73
ARHGEF39-206ENST00000490970 ADAMTSL3P82987 1691 aa25.83■■□□□ 1.73
ARHGEF39-206ENST00000490970 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.72
ARHGEF39-206ENST00000490970 MAGI2Q86UL8 1455 aa25.82■■□□□ 1.72
ARHGEF39-206ENST00000490970 BCORL1Q5H9F3 1711 aa25.81■■□□□ 1.72
ARHGEF39-206ENST00000490970 AFAP1Q8N556 730 aa25.81■■□□□ 1.72
ARHGEF39-206ENST00000490970 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
ARHGEF39-206ENST00000490970 PTPRMP28827 1452 aa25.77■■□□□ 1.72
ARHGEF39-206ENST00000490970 SIGLEC1Q9BZZ2 1709 aa25.75■■□□□ 1.71
ARHGEF39-206ENST00000490970 CDC42BPAQ5VT25 1732 aa25.74■■□□□ 1.71
ARHGEF39-206ENST00000490970 MADDQ8WXG6 1647 aa25.74■■□□□ 1.71
ARHGEF39-206ENST00000490970 ZNF518AQ6AHZ1 1483 aa25.74■■□□□ 1.71
ARHGEF39-206ENST00000490970 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
ARHGEF39-206ENST00000490970 MLECQ14165 292 aa25.73■■□□□ 1.71
ARHGEF39-206ENST00000490970 MYT1LQ9UL68 1186 aa25.73■■□□□ 1.71
ARHGEF39-206ENST00000490970 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
ARHGEF39-206ENST00000490970 ATP10AO60312 1499 aa25.72■■□□□ 1.71
ARHGEF39-206ENST00000490970 ZNF777Q9ULD5 760 aaPredicted RBP25.72■■□□□ 1.71
ARHGEF39-206ENST00000490970 MTUS2Q5JR59 1369 aa25.71■■□□□ 1.71
ARHGEF39-206ENST00000490970 KDM5CP41229 1560 aa25.7■■□□□ 1.71
ARHGEF39-206ENST00000490970 GPATCH8Q9UKJ3 1502 aaKnown RBP25.7■■□□□ 1.7
ARHGEF39-206ENST00000490970 TRAPPC8Q9Y2L5 1435 aa25.7■■□□□ 1.7
ARHGEF39-206ENST00000490970 ABCC1P33527 1531 aa25.69■■□□□ 1.7
ARHGEF39-206ENST00000490970 C9orf84Q5VXU9 1444 aa25.67■■□□□ 1.7
ARHGEF39-206ENST00000490970 RIMS1Q86UR5 1692 aaKnown RBP25.66■■□□□ 1.7
ARHGEF39-206ENST00000490970 ITSN2Q9NZM3 1697 aa25.65■■□□□ 1.7
ARHGEF39-206ENST00000490970 PLPPR3Q6T4P5 718 aa25.65■■□□□ 1.7
ARHGEF39-206ENST00000490970 CCNB3Q8WWL7 1395 aa25.65■■□□□ 1.7
ARHGEF39-206ENST00000490970 CFDP1Q9UEE9 299 aaPredicted RBP25.64■■□□□ 1.7
ARHGEF39-206ENST00000490970 MLH3Q9UHC1 1453 aa25.63■■□□□ 1.69
ARHGEF39-206ENST00000490970 SAMD9LQ8IVG5 1584 aa25.63■■□□□ 1.69
ARHGEF39-206ENST00000490970 HNRNPMP52272 730 aaKnown RBP eCLIP25.62■■□□□ 1.69
ARHGEF39-206ENST00000490970 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
ARHGEF39-206ENST00000490970 EHBP1L1Q8N3D4 1523 aa25.59■■□□□ 1.69
ARHGEF39-206ENST00000490970 ABCA6Q8N139 1617 aa25.58■■□□□ 1.69
ARHGEF39-206ENST00000490970 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.68
ARHGEF39-206ENST00000490970 FER1L4A9Z1Z3 1794 aa25.55■■□□□ 1.68
ARHGEF39-206ENST00000490970 VPS8Q8N3P4 1428 aa25.54■■□□□ 1.68
ARHGEF39-206ENST00000490970 KIDINS220Q9ULH0 1771 aa25.54■■□□□ 1.68
ARHGEF39-206ENST00000490970 TIAM1Q13009 1591 aa25.54■■□□□ 1.68
ARHGEF39-206ENST00000490970 ZNF644Q9H582 1327 aaPredicted RBP25.54■■□□□ 1.68
ARHGEF39-206ENST00000490970 KIAA1107Q9UPP5 1409 aa25.53■■□□□ 1.68
ARHGEF39-206ENST00000490970 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
ARHGEF39-206ENST00000490970 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
ARHGEF39-206ENST00000490970 REREQ9P2R6 1566 aa25.52■■□□□ 1.68
ARHGEF39-206ENST00000490970 NCOA2Q15596 1464 aa25.48■■□□□ 1.67
ARHGEF39-206ENST00000490970 CEBPAP49715 358 aaPredicted RBP25.48■■□□□ 1.67
ARHGEF39-206ENST00000490970 LMTK3Q96Q04 1460 aa25.47■■□□□ 1.67
ARHGEF39-206ENST00000490970 AGLP35573 1532 aa25.46■■□□□ 1.67
ARHGEF39-206ENST00000490970 SUPT6HQ7KZ85 1726 aaKnown RBP25.46■■□□□ 1.67
ARHGEF39-206ENST00000490970 ATP7AQ04656 1500 aa25.42■■□□□ 1.66
ARHGEF39-206ENST00000490970 MBD5Q9P267 1494 aa25.42■■□□□ 1.66
ARHGEF39-206ENST00000490970 HSPA2P54652 639 aa25.42■■□□□ 1.66
ARHGEF39-206ENST00000490970 LRRC9Q6ZRR7 1453 aa25.41■■□□□ 1.66
ARHGEF39-206ENST00000490970 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
ARHGEF39-206ENST00000490970 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
ARHGEF39-206ENST00000490970 ESF1Q9H501 851 aaKnown RBP25.39■■□□□ 1.66
ARHGEF39-206ENST00000490970 A2MP01023 1474 aa25.35■■□□□ 1.65
ARHGEF39-206ENST00000490970 MAP3K1Q13233 1512 aa25.35■■□□□ 1.65
ARHGEF39-206ENST00000490970 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
ARHGEF39-206ENST00000490970 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
ARHGEF39-206ENST00000490970 RTEL1-TNFRSF6BF6WH68 1400 aa25.3■■□□□ 1.64
ARHGEF39-206ENST00000490970 C3P01024 1663 aa25.3■■□□□ 1.64
ARHGEF39-206ENST00000490970 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
ARHGEF39-206ENST00000490970 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
ARHGEF39-206ENST00000490970 GGT6Q6P531 493 aa25.29■■□□□ 1.64
ARHGEF39-206ENST00000490970 APLP2Q06481 763 aa25.28■■□□□ 1.64
ARHGEF39-206ENST00000490970 ILDR1Q86SU0 546 aaPredicted RBP25.28■■□□□ 1.64
ARHGEF39-206ENST00000490970 CNTLNQ9NXG0 1405 aa25.28■■□□□ 1.64
ARHGEF39-206ENST00000490970 ADGBQ8N7X0 1667 aa25.27■■□□□ 1.64
ARHGEF39-206ENST00000490970 PREX1Q8TCU6 1659 aa25.27■■□□□ 1.64
ARHGEF39-206ENST00000490970 SETD1BQ9UPS6 1966 aaKnown RBP25.24■■□□□ 1.63
ARHGEF39-206ENST00000490970 DHX29Q7Z478 1369 aaKnown RBP25.24■■□□□ 1.63
ARHGEF39-206ENST00000490970 UHRF1BP1Q6BDS2 1440 aa25.23■■□□□ 1.63
ARHGEF39-206ENST00000490970 ZMYM3Q14202 1370 aa25.23■■□□□ 1.63
ARHGEF39-206ENST00000490970 MYOM3Q5VTT5 1437 aa25.22■■□□□ 1.63
ARHGEF39-206ENST00000490970 TSPY4P0CV99 314 aa25.22■■□□□ 1.63
ARHGEF39-206ENST00000490970 TSPY10P0CW01 314 aa25.22■■□□□ 1.63
ARHGEF39-206ENST00000490970 ARHGEF5Q12774 1597 aa25.22■■□□□ 1.63
ARHGEF39-206ENST00000490970 CLTCQ00610 1675 aaKnown RBP25.2■■□□□ 1.62
ARHGEF39-206ENST00000490970 MIA2Q96PC5 1412 aa25.19■■□□□ 1.62
ARHGEF39-206ENST00000490970 MROH2AA6NES4 1674 aa25.18■■□□□ 1.62
ARHGEF39-206ENST00000490970 KIF3BO15066 747 aa25.18■■□□□ 1.62
ARHGEF39-206ENST00000490970 PPP6R1Q9UPN7 881 aa25.16■■□□□ 1.62
ARHGEF39-206ENST00000490970 NPATQ14207 1427 aa25.12■■□□□ 1.61
ARHGEF39-206ENST00000490970 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
ARHGEF39-206ENST00000490970 MAST1Q9Y2H9 1570 aa25.09■■□□□ 1.61
ARHGEF39-206ENST00000490970 STRCQ7RTU9 1775 aa25.08■■□□□ 1.61
ARHGEF39-206ENST00000490970 PTPN23Q9H3S7 1636 aa25.05■■□□□ 1.6
ARHGEF39-206ENST00000490970 WASHC2CQ9Y4E1 1318 aa25.05■■□□□ 1.6
ARHGEF39-206ENST00000490970 DMRT2Q9Y5R5 561 aa25.04■■□□□ 1.6
ARHGEF39-206ENST00000490970 FBXO41Q8TF61 875 aa25.03■■□□□ 1.6
ARHGEF39-206ENST00000490970 ABCC5O15440 1437 aa25.03■■□□□ 1.6
ARHGEF39-206ENST00000490970 FGD6Q6ZV73 1430 aa25.03■■□□□ 1.6
ARHGEF39-206ENST00000490970 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms