RNA–Protein interactions for RNA: ENST00000490914.1

SSB-211, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-211ENST00000490914 ZNF710Q8N1W2 664 aa13.51□□□□□ -0.25
SSB-211ENST00000490914 DOK7Q18PE1 504 aa13.5□□□□□ -0.25
SSB-211ENST00000490914 DNAJC5Q9H3Z4 198 aa13.5□□□□□ -0.25
SSB-211ENST00000490914 DCAF8L2P0C7V8 631 aa13.47□□□□□ -0.25
SSB-211ENST00000490914 C2orf72A6NCS6 295 aa13.46□□□□□ -0.25
SSB-211ENST00000490914 KIF3CO14782 793 aa13.46□□□□□ -0.25
SSB-211ENST00000490914 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
SSB-211ENST00000490914 RIMBP2O15034 1052 aa13.44□□□□□ -0.26
SSB-211ENST00000490914 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
SSB-211ENST00000490914 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
SSB-211ENST00000490914 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
SSB-211ENST00000490914 HS3ST6Q96QI5 342 aa13.42□□□□□ -0.26
SSB-211ENST00000490914 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
SSB-211ENST00000490914 TMC2Q8TDI7 906 aa13.37□□□□□ -0.27
SSB-211ENST00000490914 ZSWIM6Q9HCJ5 1215 aa13.35□□□□□ -0.27
SSB-211ENST00000490914 ERBB3P21860 1342 aa13.34□□□□□ -0.27
SSB-211ENST00000490914 GTPBP6O43824 516 aaPredicted RBP13.33□□□□□ -0.28
SSB-211ENST00000490914 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
SSB-211ENST00000490914 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.281e-7■■□□□ 13.1
SSB-211ENST00000490914 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
SSB-211ENST00000490914 RYDENQ9NUL5 291 aaKnown RBP13.31□□□□□ -0.28
SSB-211ENST00000490914 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
SSB-211ENST00000490914 SPNS2Q8IVW8 549 aa13.28□□□□□ -0.28
SSB-211ENST00000490914 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
SSB-211ENST00000490914 KRTAP3-3Q9BYR6 98 aa13.26□□□□□ -0.29
SSB-211ENST00000490914 KRTAP3-2Q9BYR7 98 aa13.26□□□□□ -0.29
SSB-211ENST00000490914 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SSB-211ENST00000490914 DSG2Q14126 1118 aa13.24□□□□□ -0.29
SSB-211ENST00000490914 SLC34A2O95436 690 aa13.23□□□□□ -0.29
SSB-211ENST00000490914 FOXK1P85037 733 aa13.23□□□□□ -0.29
SSB-211ENST00000490914 PLPP6Q8IY26 295 aa13.22□□□□□ -0.29
SSB-211ENST00000490914 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
SSB-211ENST00000490914 MMRN1Q13201 1228 aa13.21□□□□□ -0.29
SSB-211ENST00000490914 NUDT7P0C024 238 aa13.2□□□□□ -0.3
SSB-211ENST00000490914 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
SSB-211ENST00000490914 NCKAP5LQ9HCH0 1330 aa13.17□□□□□ -0.3
SSB-211ENST00000490914 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
SSB-211ENST00000490914 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
SSB-211ENST00000490914 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
SSB-211ENST00000490914 BBXQ8WY36 941 aaPredicted RBP13.13□□□□□ -0.31
SSB-211ENST00000490914 LHX6Q9UPM6 363 aa13.12□□□□□ -0.31
SSB-211ENST00000490914 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
SSB-211ENST00000490914 CADPS2Q86UW7 1296 aa13.1□□□□□ -0.31
SSB-211ENST00000490914 KDM4FA0A1W2PPD8 638 aa13.09□□□□□ -0.31
SSB-211ENST00000490914 PDE4AP27815 886 aa13.09□□□□□ -0.31
SSB-211ENST00000490914 LARP6Q9BRS8 491 aaKnown RBP13.07□□□□□ -0.32
SSB-211ENST00000490914 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
SSB-211ENST00000490914 OXER1Q8TDS5 423 aa13.04□□□□□ -0.32
SSB-211ENST00000490914 MFSD10Q14728 455 aa13.02□□□□□ -0.33
SSB-211ENST00000490914 DDX27Q96GQ7 796 aaKnown RBP13.02□□□□□ -0.33
SSB-211ENST00000490914 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
SSB-211ENST00000490914 TBC1D12O60347 775 aa13□□□□□ -0.33
SSB-211ENST00000490914 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
SSB-211ENST00000490914 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
SSB-211ENST00000490914 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
SSB-211ENST00000490914 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.96□□□□□ -0.33
SSB-211ENST00000490914 PBX2P40425 430 aa12.94□□□□□ -0.34
SSB-211ENST00000490914 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.34
SSB-211ENST00000490914 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SSB-211ENST00000490914 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
SSB-211ENST00000490914 EMILIN3Q9NT22 766 aa12.93□□□□□ -0.34
SSB-211ENST00000490914 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
SSB-211ENST00000490914 PAXIP1Q6ZW49 1069 aaPredicted RBP12.92□□□□□ -0.34
SSB-211ENST00000490914 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
SSB-211ENST00000490914 PTGER2P43116 358 aa12.89□□□□□ -0.35
SSB-211ENST00000490914 PPP4R3BQ5MIZ7 849 aa12.88□□□□□ -0.35
SSB-211ENST00000490914 EVI5O60447 810 aa12.87□□□□□ -0.35
SSB-211ENST00000490914 ARHGAP33O14559 1287 aa12.86□□□□□ -0.35
SSB-211ENST00000490914 PSEN2P49810 448 aa12.86□□□□□ -0.35
SSB-211ENST00000490914 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
SSB-211ENST00000490914 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
SSB-211ENST00000490914 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
SSB-211ENST00000490914 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
SSB-211ENST00000490914 CAMK2BQ13554 666 aa12.83□□□□□ -0.36
SSB-211ENST00000490914 FOSBP53539 338 aa12.82□□□□□ -0.36
SSB-211ENST00000490914 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
SSB-211ENST00000490914 ADGRD1Q6QNK2 874 aa12.78□□□□□ -0.36
SSB-211ENST00000490914 DPYSL4O14531 572 aa12.77□□□□□ -0.37
SSB-211ENST00000490914 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
SSB-211ENST00000490914 BCL2L12Q9HB09 334 aa12.76□□□□□ -0.37
SSB-211ENST00000490914 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
SSB-211ENST00000490914 ADAM33Q9BZ11 813 aa12.73□□□□□ -0.37
SSB-211ENST00000490914 TK2O00142 265 aa12.72□□□□□ -0.37
SSB-211ENST00000490914 ZDHHC16Q969W1 377 aa12.72□□□□□ -0.37
SSB-211ENST00000490914 PCDHGA10Q9Y5H3 936 aa12.71□□□□□ -0.37
SSB-211ENST00000490914 HRO43593 1189 aa12.7□□□□□ -0.38
SSB-211ENST00000490914 PTPREP23469 700 aa12.68□□□□□ -0.38
SSB-211ENST00000490914 TSHZ2Q9NRE2 1034 aa12.67□□□□□ -0.38
SSB-211ENST00000490914 E2F4Q16254 413 aa12.66□□□□□ -0.38
SSB-211ENST00000490914 VPS9D1Q9Y2B5 631 aa12.66□□□□□ -0.38
SSB-211ENST00000490914 PHF14O94880 888 aa12.65□□□□□ -0.38
SSB-211ENST00000490914 WDR70Q9NW82 654 aa12.65□□□□□ -0.38
SSB-211ENST00000490914 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
SSB-211ENST00000490914 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
SSB-211ENST00000490914 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
SSB-211ENST00000490914 DDX12PQ92771 950 aa12.62□□□□□ -0.39
SSB-211ENST00000490914 PDIA6Q15084 440 aa12.61□□□□□ -0.39
SSB-211ENST00000490914 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
SSB-211ENST00000490914 COL9A1P20849 921 aa12.6□□□□□ -0.39
SSB-211ENST00000490914 FBXW7Q969H0 707 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms