RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 POGZQ7Z3K3 1410 aa27.41■■□□□ 1.98
SRGAP3-209ENST00000490889 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
SRGAP3-209ENST00000490889 RIMS1Q86UR5 1692 aaKnown RBP27.41■■□□□ 1.98
SRGAP3-209ENST00000490889 TROQ12816 1431 aaPredicted RBP27.39■■□□□ 1.97
SRGAP3-209ENST00000490889 MAGI2Q86UL8 1455 aa27.38■■□□□ 1.97
SRGAP3-209ENST00000490889 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
SRGAP3-209ENST00000490889 EFCAB2Q5VUJ9 269 aa27.33■■□□□ 1.97
SRGAP3-209ENST00000490889 PCF11O94913 1555 aaKnown RBP27.33■■□□□ 1.97
SRGAP3-209ENST00000490889 LMTK3Q96Q04 1460 aa27.32■■□□□ 1.96
SRGAP3-209ENST00000490889 CLIP1P30622 1438 aa27.29■■□□□ 1.96
SRGAP3-209ENST00000490889 ARHGAP5Q13017 1502 aa27.29■■□□□ 1.96
SRGAP3-209ENST00000490889 CASKIN1Q8WXD9 1431 aa27.27■■□□□ 1.96
SRGAP3-209ENST00000490889 MLECQ14165 292 aa27.26■■□□□ 1.95
SRGAP3-209ENST00000490889 CDC42BPBQ9Y5S2 1711 aa27.26■■□□□ 1.95
SRGAP3-209ENST00000490889 ATP10AO60312 1499 aa27.25■■□□□ 1.95
SRGAP3-209ENST00000490889 FER1L4A9Z1Z3 1794 aa27.25■■□□□ 1.95
SRGAP3-209ENST00000490889 KDM5CP41229 1560 aa27.24■■□□□ 1.95
SRGAP3-209ENST00000490889 PLPPR3Q6T4P5 718 aa27.24■■□□□ 1.95
SRGAP3-209ENST00000490889 C9orf84Q5VXU9 1444 aa27.24■■□□□ 1.95
SRGAP3-209ENST00000490889 ZNF518AQ6AHZ1 1483 aa27.23■■□□□ 1.95
SRGAP3-209ENST00000490889 CCDC18Q5T9S5 1454 aa27.22■■□□□ 1.95
SRGAP3-209ENST00000490889 PREX2Q70Z35 1606 aa27.21■■□□□ 1.95
SRGAP3-209ENST00000490889 AFAP1Q8N556 730 aa27.21■■□□□ 1.95
SRGAP3-209ENST00000490889 ARHGEF12Q9NZN5 1544 aa27.21■■□□□ 1.95
SRGAP3-209ENST00000490889 HSPA2P54652 639 aa27.16■■□□□ 1.94
SRGAP3-209ENST00000490889 FYCO1Q9BQS8 1478 aa27.16■■□□□ 1.94
SRGAP3-209ENST00000490889 DIP2CQ9Y2E4 1556 aa27.16■■□□□ 1.94
SRGAP3-209ENST00000490889 ABCC1P33527 1531 aa27.16■■□□□ 1.94
SRGAP3-209ENST00000490889 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
SRGAP3-209ENST00000490889 ABCA6Q8N139 1617 aa27.13■■□□□ 1.93
SRGAP3-209ENST00000490889 TRAPPC8Q9Y2L5 1435 aa27.13■■□□□ 1.93
SRGAP3-209ENST00000490889 ITSN2Q9NZM3 1697 aa27.12■■□□□ 1.93
SRGAP3-209ENST00000490889 MLH3Q9UHC1 1453 aa27.1■■□□□ 1.93
SRGAP3-209ENST00000490889 REREQ9P2R6 1566 aa27.09■■□□□ 1.93
SRGAP3-209ENST00000490889 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
SRGAP3-209ENST00000490889 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
SRGAP3-209ENST00000490889 FBXO41Q8TF61 875 aa27.05■■□□□ 1.92
SRGAP3-209ENST00000490889 KIDINS220Q9ULH0 1771 aa27.03■■□□□ 1.92
SRGAP3-209ENST00000490889 SAMD9LQ8IVG5 1584 aa27.02■■□□□ 1.92
SRGAP3-209ENST00000490889 PREX1Q8TCU6 1659 aa27.01■■□□□ 1.92
SRGAP3-209ENST00000490889 GPATCH8Q9UKJ3 1502 aaKnown RBP27.01■■□□□ 1.91
SRGAP3-209ENST00000490889 AGLP35573 1532 aa27■■□□□ 1.91
SRGAP3-209ENST00000490889 SYCP2Q9BX26 1530 aa26.97■■□□□ 1.91
SRGAP3-209ENST00000490889 ZNF777Q9ULD5 760 aaPredicted RBP26.96■■□□□ 1.91
SRGAP3-209ENST00000490889 C3P01024 1663 aa26.94■■□□□ 1.9
SRGAP3-209ENST00000490889 HNRNPMP52272 730 aaKnown RBP eCLIP26.9■■□□□ 1.9
SRGAP3-209ENST00000490889 UHRF1BP1Q6BDS2 1440 aa26.88■■□□□ 1.89
SRGAP3-209ENST00000490889 MTUS2Q5JR59 1369 aa26.87■■□□□ 1.89
SRGAP3-209ENST00000490889 STRCQ7RTU9 1775 aa26.87■■□□□ 1.89
SRGAP3-209ENST00000490889 CCNB3Q8WWL7 1395 aa26.86■■□□□ 1.89
SRGAP3-209ENST00000490889 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
SRGAP3-209ENST00000490889 KIAA1107Q9UPP5 1409 aa26.86■■□□□ 1.89
SRGAP3-209ENST00000490889 SPAG9O60271 1321 aaKnown RBP26.86■■□□□ 1.89
SRGAP3-209ENST00000490889 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
SRGAP3-209ENST00000490889 SETD1BQ9UPS6 1966 aaKnown RBP26.85■■□□□ 1.89
SRGAP3-209ENST00000490889 ATP7AQ04656 1500 aa26.85■■□□□ 1.89
SRGAP3-209ENST00000490889 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
SRGAP3-209ENST00000490889 PLEKHH2Q8IVE3 1493 aa26.83■■□□□ 1.89
SRGAP3-209ENST00000490889 CEP162Q5TB80 1403 aa26.82■■□□□ 1.88
SRGAP3-209ENST00000490889 SUPT6HQ7KZ85 1726 aaKnown RBP26.82■■□□□ 1.88
SRGAP3-209ENST00000490889 EHBP1L1Q8N3D4 1523 aa26.81■■□□□ 1.88
SRGAP3-209ENST00000490889 ESF1Q9H501 851 aaKnown RBP26.81■■□□□ 1.88
SRGAP3-209ENST00000490889 PLXNC1O60486 1568 aa26.8■■□□□ 1.88
SRGAP3-209ENST00000490889 CNTLNQ9NXG0 1405 aa26.8■■□□□ 1.88
SRGAP3-209ENST00000490889 CERKQ8TCT0 537 aa26.79■■□□□ 1.88
SRGAP3-209ENST00000490889 ZNF644Q9H582 1327 aaPredicted RBP26.78■■□□□ 1.88
SRGAP3-209ENST00000490889 MROH2AA6NES4 1674 aa26.77■■□□□ 1.88
SRGAP3-209ENST00000490889 A2MP01023 1474 aa26.76■■□□□ 1.87
SRGAP3-209ENST00000490889 MBD5Q9P267 1494 aa26.74■■□□□ 1.87
SRGAP3-209ENST00000490889 CLTCQ00610 1675 aaKnown RBP26.72■■□□□ 1.87
SRGAP3-209ENST00000490889 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
SRGAP3-209ENST00000490889 NPATQ14207 1427 aa26.69■■□□□ 1.86
SRGAP3-209ENST00000490889 DMRT2Q9Y5R5 561 aa26.69■■□□□ 1.86
SRGAP3-209ENST00000490889 ADGBQ8N7X0 1667 aa26.69■■□□□ 1.86
SRGAP3-209ENST00000490889 PTPRTO14522 1441 aa26.66■■□□□ 1.86
SRGAP3-209ENST00000490889 NCOA2Q15596 1464 aa26.66■■□□□ 1.86
SRGAP3-209ENST00000490889 NCOA1Q15788 1441 aa26.65■■□□□ 1.86
SRGAP3-209ENST00000490889 GGT6Q6P531 493 aa26.64■■□□□ 1.86
SRGAP3-209ENST00000490889 RTEL1-TNFRSF6BF6WH68 1400 aa26.62■■□□□ 1.85
SRGAP3-209ENST00000490889 CAMSAP1Q5T5Y3 1602 aa26.61■■□□□ 1.85
SRGAP3-209ENST00000490889 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
SRGAP3-209ENST00000490889 CAMSAP2Q08AD1 1489 aa26.61■■□□□ 1.85
SRGAP3-209ENST00000490889 MYO3AQ8NEV4 1616 aa26.61■■□□□ 1.85
SRGAP3-209ENST00000490889 ZNF142P52746 1687 aaPredicted RBP26.58■■□□□ 1.85
SRGAP3-209ENST00000490889 CCDC141Q6ZP82 1450 aa26.58■■□□□ 1.85
SRGAP3-209ENST00000490889 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
SRGAP3-209ENST00000490889 LTBP4Q8N2S1 1624 aa26.57■■□□□ 1.84
SRGAP3-209ENST00000490889 DHX29Q7Z478 1369 aaKnown RBP26.57■■□□□ 1.84
SRGAP3-209ENST00000490889 VPS8Q8N3P4 1428 aa26.55■■□□□ 1.84
SRGAP3-209ENST00000490889 CEP170BQ9Y4F5 1589 aaPredicted RBP26.54■■□□□ 1.84
SRGAP3-209ENST00000490889 PPP6R1Q9UPN7 881 aa26.53■■□□□ 1.84
SRGAP3-209ENST00000490889 LRRC9Q6ZRR7 1453 aa26.52■■□□□ 1.84
SRGAP3-209ENST00000490889 NCKAP5LQ9HCH0 1330 aa26.51■■□□□ 1.83
SRGAP3-209ENST00000490889 ARHGEF5Q12774 1597 aa26.5■■□□□ 1.83
SRGAP3-209ENST00000490889 PLA2R1Q13018 1463 aa26.48■■□□□ 1.83
SRGAP3-209ENST00000490889 KIF3BO15066 747 aa26.47■■□□□ 1.83
SRGAP3-209ENST00000490889 RSPH4AQ5TD94 716 aa26.46■■□□□ 1.83
SRGAP3-209ENST00000490889 TCOF1Q13428 1488 aaKnown RBP26.46■■□□□ 1.83
SRGAP3-209ENST00000490889 KDM5DQ9BY66 1539 aa26.44■■□□□ 1.82
SRGAP3-209ENST00000490889 KANK4Q5T7N3 995 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms