RNA–Protein interactions for RNA: ENST00000490710.1

PTK7-217, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-217ENST00000490710 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
PTK7-217ENST00000490710 KANK4Q5T7N3 995 aaPredicted RBP24.55■■□□□ 1.52
PTK7-217ENST00000490710 PREX2Q70Z35 1606 aa24.54■■□□□ 1.52
PTK7-217ENST00000490710 ARHGAP5Q13017 1502 aa24.53■■□□□ 1.52
PTK7-217ENST00000490710 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
PTK7-217ENST00000490710 GPATCH8Q9UKJ3 1502 aaKnown RBP24.52■■□□□ 1.52
PTK7-217ENST00000490710 NCOA2Q15596 1464 aa24.5■■□□□ 1.51
PTK7-217ENST00000490710 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
PTK7-217ENST00000490710 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
PTK7-217ENST00000490710 DENND4BO75064 1496 aaPredicted RBP24.45■■□□□ 1.51
PTK7-217ENST00000490710 ADGRL1O94910 1474 aa24.45■■□□□ 1.51
PTK7-217ENST00000490710 SCAPERQ9BY12 1400 aa24.44■■□□□ 1.5
PTK7-217ENST00000490710 RAPGEF3O95398 923 aa24.43■■□□□ 1.5
PTK7-217ENST00000490710 ZNF777Q9ULD5 760 aaPredicted RBP24.42■■□□□ 1.5
PTK7-217ENST00000490710 RICTORQ6R327 1708 aa24.41■■□□□ 1.5
PTK7-217ENST00000490710 FRMPD1Q5SYB0 1578 aa24.37■■□□□ 1.49
PTK7-217ENST00000490710 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
PTK7-217ENST00000490710 ABCC1P33527 1531 aa24.36■■□□□ 1.49
PTK7-217ENST00000490710 PLEKHH2Q8IVE3 1493 aa24.36■■□□□ 1.49
PTK7-217ENST00000490710 POGZQ7Z3K3 1410 aa24.35■■□□□ 1.49
PTK7-217ENST00000490710 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
PTK7-217ENST00000490710 MYOM3Q5VTT5 1437 aa24.33■■□□□ 1.49
PTK7-217ENST00000490710 ARHGEF12Q9NZN5 1544 aa24.32■■□□□ 1.48
PTK7-217ENST00000490710 ZNF518AQ6AHZ1 1483 aa24.32■■□□□ 1.48
PTK7-217ENST00000490710 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
PTK7-217ENST00000490710 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
PTK7-217ENST00000490710 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.48
PTK7-217ENST00000490710 AFAP1Q8N556 730 aa24.3■■□□□ 1.48
PTK7-217ENST00000490710 ZNF644Q9H582 1327 aaPredicted RBP24.3■■□□□ 1.48
PTK7-217ENST00000490710 TRAPPC8Q9Y2L5 1435 aa24.28■■□□□ 1.48
PTK7-217ENST00000490710 MAGI2Q86UL8 1455 aa24.28■■□□□ 1.48
PTK7-217ENST00000490710 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
PTK7-217ENST00000490710 KDM5CP41229 1560 aa24.26■■□□□ 1.47
PTK7-217ENST00000490710 CAMSAP2Q08AD1 1489 aa24.26■■□□□ 1.47
PTK7-217ENST00000490710 RSPH4AQ5TD94 716 aa24.24■■□□□ 1.47
PTK7-217ENST00000490710 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
PTK7-217ENST00000490710 MBD5Q9P267 1494 aa24.22■■□□□ 1.47
PTK7-217ENST00000490710 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
PTK7-217ENST00000490710 ZFYVE16Q7Z3T8 1539 aa24.21■■□□□ 1.47
PTK7-217ENST00000490710 MLH3Q9UHC1 1453 aa24.21■■□□□ 1.47
PTK7-217ENST00000490710 HECW2Q9P2P5 1572 aa24.2■■□□□ 1.46
PTK7-217ENST00000490710 FGD6Q6ZV73 1430 aa24.19■■□□□ 1.46
PTK7-217ENST00000490710 ARHGEF40Q8TER5 1519 aa24.19■■□□□ 1.46
PTK7-217ENST00000490710 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
PTK7-217ENST00000490710 PTPN23Q9H3S7 1636 aa24.18■■□□□ 1.46
PTK7-217ENST00000490710 SPAG9O60271 1321 aaKnown RBP24.18■■□□□ 1.46
PTK7-217ENST00000490710 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
PTK7-217ENST00000490710 CCDC141Q6ZP82 1450 aa24.15■■□□□ 1.46
PTK7-217ENST00000490710 KIDINS220Q9ULH0 1771 aa24.15■■□□□ 1.46
PTK7-217ENST00000490710 ATP10AO60312 1499 aa24.14■■□□□ 1.46
PTK7-217ENST00000490710 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
PTK7-217ENST00000490710 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
PTK7-217ENST00000490710 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
PTK7-217ENST00000490710 RTEL1-TNFRSF6BF6WH68 1400 aa24.1■■□□□ 1.45
PTK7-217ENST00000490710 ATP7AQ04656 1500 aa24.1■■□□□ 1.45
PTK7-217ENST00000490710 INO80Q9ULG1 1556 aaPredicted RBP24.1■■□□□ 1.45
PTK7-217ENST00000490710 DIP2CQ9Y2E4 1556 aa24.1■■□□□ 1.45
PTK7-217ENST00000490710 ABCA6Q8N139 1617 aa24.09■■□□□ 1.45
PTK7-217ENST00000490710 C9orf84Q5VXU9 1444 aa24.09■■□□□ 1.45
PTK7-217ENST00000490710 ARID4BQ4LE39 1312 aaPredicted RBP24.07■■□□□ 1.44
PTK7-217ENST00000490710 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
PTK7-217ENST00000490710 REREQ9P2R6 1566 aa24.05■■□□□ 1.44
PTK7-217ENST00000490710 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
PTK7-217ENST00000490710 MAST1Q9Y2H9 1570 aa24.03■■□□□ 1.44
PTK7-217ENST00000490710 ABCC5O15440 1437 aa24.03■■□□□ 1.44
PTK7-217ENST00000490710 ADGBQ8N7X0 1667 aa24.02■■□□□ 1.44
PTK7-217ENST00000490710 DAPK1P53355 1430 aa24.01■■□□□ 1.43
PTK7-217ENST00000490710 SIGLEC1Q9BZZ2 1709 aa24.01■■□□□ 1.43
PTK7-217ENST00000490710 KDM4FA0A1W2PPD8 638 aa24.01■■□□□ 1.43
PTK7-217ENST00000490710 CROCC2H7BZ55 1655 aa24■■□□□ 1.43
PTK7-217ENST00000490710 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
PTK7-217ENST00000490710 A2MP01023 1474 aa23.99■■□□□ 1.43
PTK7-217ENST00000490710 BCORL1Q5H9F3 1711 aa23.98■■□□□ 1.43
PTK7-217ENST00000490710 SHANK2Q9UPX8 1470 aa23.98■■□□□ 1.43
PTK7-217ENST00000490710 AGLP35573 1532 aa23.98■■□□□ 1.43
PTK7-217ENST00000490710 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
PTK7-217ENST00000490710 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
PTK7-217ENST00000490710 ADAMTSL3P82987 1691 aa23.94■■□□□ 1.42
PTK7-217ENST00000490710 PLXNC1O60486 1568 aa23.93■■□□□ 1.42
PTK7-217ENST00000490710 MLECQ14165 292 aa23.92■■□□□ 1.42
PTK7-217ENST00000490710 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
PTK7-217ENST00000490710 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
PTK7-217ENST00000490710 RRP7BPQ9NSQ0 103 aa23.87■■□□□ 1.41
PTK7-217ENST00000490710 DUOX2Q9NRD8 1548 aa23.86■■□□□ 1.41
PTK7-217ENST00000490710 ADGRL2O95490 1459 aa23.86■■□□□ 1.41
PTK7-217ENST00000490710 NCOA1Q15788 1441 aa23.85■■□□□ 1.41
PTK7-217ENST00000490710 MADDQ8WXG6 1647 aa23.85■■□□□ 1.41
PTK7-217ENST00000490710 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
PTK7-217ENST00000490710 KIF15Q9NS87 1388 aa23.85■■□□□ 1.41
PTK7-217ENST00000490710 PTPRKQ15262 1439 aa23.84■■□□□ 1.41
PTK7-217ENST00000490710 KIF3BO15066 747 aa23.84■■□□□ 1.41
PTK7-217ENST00000490710 ITGAEP38570 1179 aa23.84■■□□□ 1.41
PTK7-217ENST00000490710 FER1L4A9Z1Z3 1794 aa23.83■■□□□ 1.41
PTK7-217ENST00000490710 GGT6Q6P531 493 aa23.81■■□□□ 1.4
PTK7-217ENST00000490710 PPP6R1Q9UPN7 881 aa23.81■■□□□ 1.4
PTK7-217ENST00000490710 EIF2AK4Q9P2K8 1649 aaKnown RBP23.81■■□□□ 1.4
PTK7-217ENST00000490710 ROCK1Q13464 1354 aa23.8■■□□□ 1.4
PTK7-217ENST00000490710 RIMS1Q86UR5 1692 aaKnown RBP23.8■■□□□ 1.4
PTK7-217ENST00000490710 ESF1Q9H501 851 aaKnown RBP23.8■■□□□ 1.4
PTK7-217ENST00000490710 ERBINQ96RT1 1412 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms