RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 ZMYM4Q5VZL5 1548 aa16.81■□□□□ 0.28
NINJ1-205ENST00000490564 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
NINJ1-205ENST00000490564 ARHGEF40Q8TER5 1519 aa16.8■□□□□ 0.28
NINJ1-205ENST00000490564 SIGLEC1Q9BZZ2 1709 aa16.77■□□□□ 0.28
NINJ1-205ENST00000490564 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
NINJ1-205ENST00000490564 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
NINJ1-205ENST00000490564 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.27
NINJ1-205ENST00000490564 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
NINJ1-205ENST00000490564 MAGI2Q86UL8 1455 aa16.74■□□□□ 0.27
NINJ1-205ENST00000490564 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
NINJ1-205ENST00000490564 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
NINJ1-205ENST00000490564 ABCC1P33527 1531 aa16.73■□□□□ 0.27
NINJ1-205ENST00000490564 KDM5CP41229 1560 aa16.72■□□□□ 0.27
NINJ1-205ENST00000490564 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
NINJ1-205ENST00000490564 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
NINJ1-205ENST00000490564 VPS8Q8N3P4 1428 aa16.71■□□□□ 0.27
NINJ1-205ENST00000490564 MTUS2Q5JR59 1369 aa16.71■□□□□ 0.27
NINJ1-205ENST00000490564 ZNF518AQ6AHZ1 1483 aa16.71■□□□□ 0.27
NINJ1-205ENST00000490564 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
NINJ1-205ENST00000490564 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
NINJ1-205ENST00000490564 SAMD9LQ8IVG5 1584 aa16.69■□□□□ 0.26
NINJ1-205ENST00000490564 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
NINJ1-205ENST00000490564 HECW2Q9P2P5 1572 aa16.68■□□□□ 0.26
NINJ1-205ENST00000490564 ARHGEF12Q9NZN5 1544 aa16.68■□□□□ 0.26
NINJ1-205ENST00000490564 SUPT6HQ7KZ85 1726 aaKnown RBP16.67■□□□□ 0.26
NINJ1-205ENST00000490564 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.26
NINJ1-205ENST00000490564 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
NINJ1-205ENST00000490564 TRAPPC8Q9Y2L5 1435 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 MLH3Q9UHC1 1453 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 MAP3K1Q13233 1512 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 SYCP2Q9BX26 1530 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
NINJ1-205ENST00000490564 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
NINJ1-205ENST00000490564 ATP10AO60312 1499 aa16.62■□□□□ 0.25
NINJ1-205ENST00000490564 AFAP1Q8N556 730 aa16.62■□□□□ 0.25
NINJ1-205ENST00000490564 REREQ9P2R6 1566 aa16.62■□□□□ 0.25
NINJ1-205ENST00000490564 KIDINS220Q9ULH0 1771 aa16.61■□□□□ 0.25
NINJ1-205ENST00000490564 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
NINJ1-205ENST00000490564 ARID4BQ4LE39 1312 aaPredicted RBP16.6■□□□□ 0.25
NINJ1-205ENST00000490564 KIAA1107Q9UPP5 1409 aa16.6■□□□□ 0.25
NINJ1-205ENST00000490564 NCOA2Q15596 1464 aa16.6■□□□□ 0.25
NINJ1-205ENST00000490564 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
NINJ1-205ENST00000490564 RIMS1Q86UR5 1692 aaKnown RBP16.59■□□□□ 0.25
NINJ1-205ENST00000490564 CFDP1Q9UEE9 299 aaPredicted RBP16.59■□□□□ 0.25
NINJ1-205ENST00000490564 PTPRMP28827 1452 aa16.59■□□□□ 0.25
NINJ1-205ENST00000490564 FER1L4A9Z1Z3 1794 aa16.59■□□□□ 0.25
NINJ1-205ENST00000490564 ZNF777Q9ULD5 760 aaPredicted RBP16.58■□□□□ 0.24
NINJ1-205ENST00000490564 INO80Q9ULG1 1556 aaPredicted RBP16.56■□□□□ 0.24
NINJ1-205ENST00000490564 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
NINJ1-205ENST00000490564 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
NINJ1-205ENST00000490564 MYT1LQ9UL68 1186 aa16.53■□□□□ 0.24
NINJ1-205ENST00000490564 AGLP35573 1532 aa16.53■□□□□ 0.24
NINJ1-205ENST00000490564 MBD5Q9P267 1494 aa16.53■□□□□ 0.24
NINJ1-205ENST00000490564 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
NINJ1-205ENST00000490564 CAMSAP2Q08AD1 1489 aa16.51■□□□□ 0.23
NINJ1-205ENST00000490564 KANK4Q5T7N3 995 aaPredicted RBP16.51■□□□□ 0.23
NINJ1-205ENST00000490564 ADGBQ8N7X0 1667 aa16.5■□□□□ 0.23
NINJ1-205ENST00000490564 SPAG9O60271 1321 aaKnown RBP16.49■□□□□ 0.23
NINJ1-205ENST00000490564 PLXNC1O60486 1568 aa16.48■□□□□ 0.23
NINJ1-205ENST00000490564 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
NINJ1-205ENST00000490564 MLECQ14165 292 aa16.48■□□□□ 0.23
NINJ1-205ENST00000490564 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
NINJ1-205ENST00000490564 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
NINJ1-205ENST00000490564 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
NINJ1-205ENST00000490564 APLP2Q06481 763 aa16.44■□□□□ 0.22
NINJ1-205ENST00000490564 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
NINJ1-205ENST00000490564 A2MP01023 1474 aa16.43■□□□□ 0.22
NINJ1-205ENST00000490564 RSPH4AQ5TD94 716 aa16.42■□□□□ 0.22
NINJ1-205ENST00000490564 C3P01024 1663 aa16.42■□□□□ 0.22
NINJ1-205ENST00000490564 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
NINJ1-205ENST00000490564 MAST1Q9Y2H9 1570 aa16.41■□□□□ 0.22
NINJ1-205ENST00000490564 LMTK3Q96Q04 1460 aa16.4■□□□□ 0.22
NINJ1-205ENST00000490564 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
NINJ1-205ENST00000490564 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
NINJ1-205ENST00000490564 CROCC2H7BZ55 1655 aa16.38■□□□□ 0.21
NINJ1-205ENST00000490564 CLTCQ00610 1675 aaKnown RBP16.37■□□□□ 0.21
NINJ1-205ENST00000490564 CNTLNQ9NXG0 1405 aa16.36■□□□□ 0.21
NINJ1-205ENST00000490564 PLPPR3Q6T4P5 718 aa16.35■□□□□ 0.21
NINJ1-205ENST00000490564 DHX29Q7Z478 1369 aaKnown RBP16.35■□□□□ 0.21
NINJ1-205ENST00000490564 TCOF1Q13428 1488 aaKnown RBP16.34■□□□□ 0.21
NINJ1-205ENST00000490564 TSPY4P0CV99 314 aa16.33■□□□□ 0.2
NINJ1-205ENST00000490564 TSPY10P0CW01 314 aa16.33■□□□□ 0.2
NINJ1-205ENST00000490564 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
NINJ1-205ENST00000490564 FGD6Q6ZV73 1430 aa16.33■□□□□ 0.2
NINJ1-205ENST00000490564 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
NINJ1-205ENST00000490564 CEBPAP49715 358 aaPredicted RBP16.32■□□□□ 0.2
NINJ1-205ENST00000490564 SETD1BQ9UPS6 1966 aaKnown RBP16.32■□□□□ 0.2
NINJ1-205ENST00000490564 EIF2AK4Q9P2K8 1649 aaKnown RBP16.3■□□□□ 0.2
NINJ1-205ENST00000490564 SHANK2Q9UPX8 1470 aa16.3■□□□□ 0.2
NINJ1-205ENST00000490564 FAM135AQ9P2D6 1515 aa16.29■□□□□ 0.2
NINJ1-205ENST00000490564 PPP6R1Q9UPN7 881 aa16.29■□□□□ 0.2
NINJ1-205ENST00000490564 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
NINJ1-205ENST00000490564 GGT6Q6P531 493 aa16.28■□□□□ 0.2
NINJ1-205ENST00000490564 ABCC5O15440 1437 aa16.28■□□□□ 0.2
NINJ1-205ENST00000490564 ZMYM3Q14202 1370 aa16.27■□□□□ 0.2
NINJ1-205ENST00000490564 DAPK1P53355 1430 aa16.27■□□□□ 0.19
NINJ1-205ENST00000490564 UHRF1BP1Q6BDS2 1440 aa16.27■□□□□ 0.19
NINJ1-205ENST00000490564 NPATQ14207 1427 aa16.26■□□□□ 0.19
NINJ1-205ENST00000490564 KDM5DQ9BY66 1539 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms