RNA–Protein interactions for RNA: ENST00000490544.1

C9orf43-203, Transcript of chromosome 9 open reading frame 43, humanhuman

TSL 3

Gene C9orf43, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-203ENST00000490544 ARAP3Q8WWN8 1544 aa24.45■■□□□ 1.51
C9orf43-203ENST00000490544 AKNAQ7Z591 1439 aa24.44■■□□□ 1.5
C9orf43-203ENST00000490544 PHLDB1Q86UU1 1377 aa24.43■■□□□ 1.5
C9orf43-203ENST00000490544 ITSN2Q9NZM3 1697 aa24.41■■□□□ 1.5
C9orf43-203ENST00000490544 APLP2Q06481 763 aa24.41■■□□□ 1.5
C9orf43-203ENST00000490544 RICTORQ6R327 1708 aa24.41■■□□□ 1.5
C9orf43-203ENST00000490544 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
C9orf43-203ENST00000490544 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
C9orf43-203ENST00000490544 CCNB3Q8WWL7 1395 aa24.38■■□□□ 1.49
C9orf43-203ENST00000490544 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
C9orf43-203ENST00000490544 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
C9orf43-203ENST00000490544 RAPGEF3O95398 923 aa24.37■■□□□ 1.49
C9orf43-203ENST00000490544 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
C9orf43-203ENST00000490544 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
C9orf43-203ENST00000490544 GPATCH8Q9UKJ3 1502 aaKnown RBP24.34■■□□□ 1.49
C9orf43-203ENST00000490544 HECW2Q9P2P5 1572 aa24.33■■□□□ 1.49
C9orf43-203ENST00000490544 ZNF777Q9ULD5 760 aaPredicted RBP24.33■■□□□ 1.49
C9orf43-203ENST00000490544 SCAPERQ9BY12 1400 aa24.33■■□□□ 1.49
C9orf43-203ENST00000490544 SAMD9LQ8IVG5 1584 aa24.31■■□□□ 1.48
C9orf43-203ENST00000490544 ABCC1P33527 1531 aa24.3■■□□□ 1.48
C9orf43-203ENST00000490544 KANK4Q5T7N3 995 aaPredicted RBP24.3■■□□□ 1.48
C9orf43-203ENST00000490544 POGZQ7Z3K3 1410 aa24.29■■□□□ 1.48
C9orf43-203ENST00000490544 CFDP1Q9UEE9 299 aaPredicted RBP24.28■■□□□ 1.48
C9orf43-203ENST00000490544 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
C9orf43-203ENST00000490544 ZMYM4Q5VZL5 1548 aa24.25■■□□□ 1.47
C9orf43-203ENST00000490544 ARHGEF40Q8TER5 1519 aa24.24■■□□□ 1.47
C9orf43-203ENST00000490544 ZNF518AQ6AHZ1 1483 aa24.23■■□□□ 1.47
C9orf43-203ENST00000490544 ZFYVE16Q7Z3T8 1539 aa24.22■■□□□ 1.47
C9orf43-203ENST00000490544 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
C9orf43-203ENST00000490544 MYT1LQ9UL68 1186 aa24.2■■□□□ 1.46
C9orf43-203ENST00000490544 KDM5CP41229 1560 aa24.19■■□□□ 1.46
C9orf43-203ENST00000490544 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
C9orf43-203ENST00000490544 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
C9orf43-203ENST00000490544 AFAP1Q8N556 730 aa24.17■■□□□ 1.46
C9orf43-203ENST00000490544 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
C9orf43-203ENST00000490544 ZNF644Q9H582 1327 aaPredicted RBP24.15■■□□□ 1.46
C9orf43-203ENST00000490544 HNRNPMP52272 730 aaKnown RBP eCLIP24.15■■□□□ 1.46
C9orf43-203ENST00000490544 YEATS2Q9ULM3 1422 aa24.15■■□□□ 1.46
C9orf43-203ENST00000490544 MAGI2Q86UL8 1455 aa24.14■■□□□ 1.46
C9orf43-203ENST00000490544 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
C9orf43-203ENST00000490544 ABCA6Q8N139 1617 aa24.11■■□□□ 1.45
C9orf43-203ENST00000490544 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
C9orf43-203ENST00000490544 KIDINS220Q9ULH0 1771 aa24.1■■□□□ 1.45
C9orf43-203ENST00000490544 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
C9orf43-203ENST00000490544 SIGLEC1Q9BZZ2 1709 aa24.09■■□□□ 1.45
C9orf43-203ENST00000490544 DIP2CQ9Y2E4 1556 aa24.08■■□□□ 1.44
C9orf43-203ENST00000490544 PPARGC1BQ86YN6 1023 aaKnown RBP24.07■■□□□ 1.44
C9orf43-203ENST00000490544 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
C9orf43-203ENST00000490544 MLH3Q9UHC1 1453 aa24.06■■□□□ 1.44
C9orf43-203ENST00000490544 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
C9orf43-203ENST00000490544 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
C9orf43-203ENST00000490544 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
C9orf43-203ENST00000490544 MIA2Q96PC5 1412 aa24.04■■□□□ 1.44
C9orf43-203ENST00000490544 FBXO41Q8TF61 875 aa24.04■■□□□ 1.44
C9orf43-203ENST00000490544 ATP10AO60312 1499 aa24.04■■□□□ 1.44
C9orf43-203ENST00000490544 BCORL1Q5H9F3 1711 aa24.04■■□□□ 1.44
C9orf43-203ENST00000490544 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
C9orf43-203ENST00000490544 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
C9orf43-203ENST00000490544 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
C9orf43-203ENST00000490544 ARHGEF5Q12774 1597 aa24.02■■□□□ 1.44
C9orf43-203ENST00000490544 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
C9orf43-203ENST00000490544 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
C9orf43-203ENST00000490544 CROCC2H7BZ55 1655 aa23.97■■□□□ 1.43
C9orf43-203ENST00000490544 ADAMTSL3P82987 1691 aa23.95■■□□□ 1.43
C9orf43-203ENST00000490544 MADDQ8WXG6 1647 aa23.95■■□□□ 1.43
C9orf43-203ENST00000490544 FER1L4A9Z1Z3 1794 aa23.95■■□□□ 1.42
C9orf43-203ENST00000490544 REREQ9P2R6 1566 aa23.95■■□□□ 1.42
C9orf43-203ENST00000490544 MLECQ14165 292 aa23.94■■□□□ 1.42
C9orf43-203ENST00000490544 RIMS1Q86UR5 1692 aaKnown RBP23.93■■□□□ 1.42
C9orf43-203ENST00000490544 TCOF1Q13428 1488 aaKnown RBP23.92■■□□□ 1.42
C9orf43-203ENST00000490544 RSPH4AQ5TD94 716 aa23.91■■□□□ 1.42
C9orf43-203ENST00000490544 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
C9orf43-203ENST00000490544 TSPY4P0CV99 314 aa23.9■■□□□ 1.42
C9orf43-203ENST00000490544 TSPY10P0CW01 314 aa23.9■■□□□ 1.42
C9orf43-203ENST00000490544 FAM50AQ14320 339 aaKnown RBP23.9■■□□□ 1.42
C9orf43-203ENST00000490544 MAST1Q9Y2H9 1570 aa23.89■■□□□ 1.41
C9orf43-203ENST00000490544 A2MP01023 1474 aa23.88■■□□□ 1.41
C9orf43-203ENST00000490544 RTEL1-TNFRSF6BF6WH68 1400 aa23.88■■□□□ 1.41
C9orf43-203ENST00000490544 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
C9orf43-203ENST00000490544 DAPK1P53355 1430 aa23.84■■□□□ 1.41
C9orf43-203ENST00000490544 AGLP35573 1532 aa23.84■■□□□ 1.41
C9orf43-203ENST00000490544 ABCC5O15440 1437 aa23.83■■□□□ 1.4
C9orf43-203ENST00000490544 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
C9orf43-203ENST00000490544 PTPRMP28827 1452 aa23.81■■□□□ 1.4
C9orf43-203ENST00000490544 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
C9orf43-203ENST00000490544 CHIC2Q9UKJ5 165 aa23.76■■□□□ 1.39
C9orf43-203ENST00000490544 ESF1Q9H501 851 aaKnown RBP23.75■■□□□ 1.39
C9orf43-203ENST00000490544 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
C9orf43-203ENST00000490544 DHX29Q7Z478 1369 aaKnown RBP23.75■■□□□ 1.39
C9orf43-203ENST00000490544 ITGAEP38570 1179 aa23.72■■□□□ 1.39
C9orf43-203ENST00000490544 GGT6Q6P531 493 aa23.72■■□□□ 1.39
C9orf43-203ENST00000490544 DUOX2Q9NRD8 1548 aa23.72■■□□□ 1.39
C9orf43-203ENST00000490544 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
C9orf43-203ENST00000490544 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
C9orf43-203ENST00000490544 RRP7BPQ9NSQ0 103 aa23.71■■□□□ 1.39
C9orf43-203ENST00000490544 C3P01024 1663 aa23.7■■□□□ 1.39
C9orf43-203ENST00000490544 ANKRD30AQ9BXX3 1397 aa23.7■■□□□ 1.38
C9orf43-203ENST00000490544 KIF3BO15066 747 aa23.7■■□□□ 1.38
C9orf43-203ENST00000490544 MROH2AA6NES4 1674 aa23.67■■□□□ 1.38
C9orf43-203ENST00000490544 RRBP1Q9P2E9 1410 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms