RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 ZBTB22O15209 634 aa21.72■■□□□ 1.07
SFXN4-208ENST00000490417 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
SFXN4-208ENST00000490417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
SFXN4-208ENST00000490417 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
SFXN4-208ENST00000490417 FANCAO15360 1455 aa21.7■■□□□ 1.06
SFXN4-208ENST00000490417 EFCAB2Q5VUJ9 269 aa21.68■■□□□ 1.06
SFXN4-208ENST00000490417 PLCH2O75038 1416 aa21.67■■□□□ 1.06
SFXN4-208ENST00000490417 CEP162Q5TB80 1403 aa21.67■■□□□ 1.06
SFXN4-208ENST00000490417 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
SFXN4-208ENST00000490417 KIF14Q15058 1648 aa21.66■■□□□ 1.06
SFXN4-208ENST00000490417 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
SFXN4-208ENST00000490417 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
SFXN4-208ENST00000490417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.65■■□□□ 1.06
SFXN4-208ENST00000490417 FOXD4L1Q9NU39 408 aa21.65■■□□□ 1.06
SFXN4-208ENST00000490417 DENND4BO75064 1496 aaPredicted RBP21.64■■□□□ 1.06
SFXN4-208ENST00000490417 TTC37Q6PGP7 1564 aa21.64■■□□□ 1.05
SFXN4-208ENST00000490417 KDM4FA0A1W2PPD8 638 aa21.61■■□□□ 1.05
SFXN4-208ENST00000490417 LOC105371045A0A1W2PR82 267 aa21.6■■□□□ 1.05
SFXN4-208ENST00000490417 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
SFXN4-208ENST00000490417 MYO5CQ9NQX4 1742 aa21.58■■□□□ 1.04
SFXN4-208ENST00000490417 SCAPERQ9BY12 1400 aa21.55■■□□□ 1.04
SFXN4-208ENST00000490417 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
SFXN4-208ENST00000490417 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
SFXN4-208ENST00000490417 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
SFXN4-208ENST00000490417 ARID4BQ4LE39 1312 aaPredicted RBP21.53■■□□□ 1.04
SFXN4-208ENST00000490417 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.04
SFXN4-208ENST00000490417 POGZQ7Z3K3 1410 aa21.49■■□□□ 1.03
SFXN4-208ENST00000490417 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
SFXN4-208ENST00000490417 RICTORQ6R327 1708 aa21.47■■□□□ 1.03
SFXN4-208ENST00000490417 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
SFXN4-208ENST00000490417 CCNB3Q8WWL7 1395 aa21.47■■□□□ 1.03
SFXN4-208ENST00000490417 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
SFXN4-208ENST00000490417 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
SFXN4-208ENST00000490417 CFDP1Q9UEE9 299 aaPredicted RBP21.45■■□□□ 1.02
SFXN4-208ENST00000490417 VPS8Q8N3P4 1428 aa21.45■■□□□ 1.02
SFXN4-208ENST00000490417 ZNF777Q9ULD5 760 aaPredicted RBP21.44■■□□□ 1.02
SFXN4-208ENST00000490417 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
SFXN4-208ENST00000490417 PREX2Q70Z35 1606 aa21.43■■□□□ 1.02
SFXN4-208ENST00000490417 APLP2Q06481 763 aa21.42■■□□□ 1.02
SFXN4-208ENST00000490417 EHBP1L1Q8N3D4 1523 aa21.42■■□□□ 1.02
SFXN4-208ENST00000490417 ARHGEF40Q8TER5 1519 aa21.42■■□□□ 1.02
SFXN4-208ENST00000490417 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
SFXN4-208ENST00000490417 CDC42BPBQ9Y5S2 1711 aa21.4■■□□□ 1.02
SFXN4-208ENST00000490417 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.02
SFXN4-208ENST00000490417 PLEKHH2Q8IVE3 1493 aa21.39■■□□□ 1.02
SFXN4-208ENST00000490417 ATP10AO60312 1499 aa21.37■■□□□ 1.01
SFXN4-208ENST00000490417 CDC42BPAQ5VT25 1732 aa21.36■■□□□ 1.01
SFXN4-208ENST00000490417 YEATS2Q9ULM3 1422 aa21.35■■□□□ 1.01
SFXN4-208ENST00000490417 ABCC1P33527 1531 aa21.34■■□□□ 1.01
SFXN4-208ENST00000490417 C9orf84Q5VXU9 1444 aa21.34■■□□□ 1.01
SFXN4-208ENST00000490417 KIAA1107Q9UPP5 1409 aa21.33■■□□□ 1.01
SFXN4-208ENST00000490417 MLH3Q9UHC1 1453 aa21.32■■□□□ 1
SFXN4-208ENST00000490417 KDM5CP41229 1560 aa21.32■■□□□ 1
SFXN4-208ENST00000490417 TIAM1Q13009 1591 aa21.31■■□□□ 1
SFXN4-208ENST00000490417 MAP3K1Q13233 1512 aa21.3■■□□□ 1
SFXN4-208ENST00000490417 SUPT6HQ7KZ85 1726 aaKnown RBP21.3■■□□□ 1
SFXN4-208ENST00000490417 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
SFXN4-208ENST00000490417 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
SFXN4-208ENST00000490417 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
SFXN4-208ENST00000490417 ITSN2Q9NZM3 1697 aa21.29■■□□□ 1
SFXN4-208ENST00000490417 HNRNPMP52272 730 aaKnown RBP eCLIP21.29■■□□□ 1
SFXN4-208ENST00000490417 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
SFXN4-208ENST00000490417 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
SFXN4-208ENST00000490417 U3KPZ7 1027 aaPredicted RBP21.28■■□□□ 1
SFXN4-208ENST00000490417 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
SFXN4-208ENST00000490417 MYCNP04198 464 aaPredicted RBP21.27■■□□□ 1
SFXN4-208ENST00000490417 MLECQ14165 292 aa21.27■■□□□ 1
SFXN4-208ENST00000490417 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
SFXN4-208ENST00000490417 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
SFXN4-208ENST00000490417 LRRC9Q6ZRR7 1453 aa21.26■□□□□ 0.99
SFXN4-208ENST00000490417 SAMD9LQ8IVG5 1584 aa21.26■□□□□ 0.99
SFXN4-208ENST00000490417 PTPRMP28827 1452 aa21.26■□□□□ 0.99
SFXN4-208ENST00000490417 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
SFXN4-208ENST00000490417 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
SFXN4-208ENST00000490417 REREQ9P2R6 1566 aa21.21■□□□□ 0.99
SFXN4-208ENST00000490417 MADDQ8WXG6 1647 aa21.2■□□□□ 0.98
SFXN4-208ENST00000490417 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
SFXN4-208ENST00000490417 TSPY4P0CV99 314 aa21.18■□□□□ 0.98
SFXN4-208ENST00000490417 TSPY10P0CW01 314 aa21.18■□□□□ 0.98
SFXN4-208ENST00000490417 ZNF644Q9H582 1327 aaPredicted RBP21.18■□□□□ 0.98
SFXN4-208ENST00000490417 KANK4Q5T7N3 995 aaPredicted RBP21.17■□□□□ 0.98
SFXN4-208ENST00000490417 AGLP35573 1532 aa21.16■□□□□ 0.98
SFXN4-208ENST00000490417 KIDINS220Q9ULH0 1771 aa21.15■□□□□ 0.98
SFXN4-208ENST00000490417 ABCA6Q8N139 1617 aa21.15■□□□□ 0.98
SFXN4-208ENST00000490417 ATP7AQ04656 1500 aa21.14■□□□□ 0.98
SFXN4-208ENST00000490417 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
SFXN4-208ENST00000490417 RIMS1Q86UR5 1692 aaKnown RBP21.14■□□□□ 0.97
SFXN4-208ENST00000490417 CAMSAP2Q08AD1 1489 aa21.13■□□□□ 0.97
SFXN4-208ENST00000490417 MIA2Q96PC5 1412 aa21.13■□□□□ 0.97
SFXN4-208ENST00000490417 RNF39Q9H2S5 420 aa21.13■□□□□ 0.97
SFXN4-208ENST00000490417 CCDC141Q6ZP82 1450 aa21.13■□□□□ 0.97
SFXN4-208ENST00000490417 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
SFXN4-208ENST00000490417 FER1L4A9Z1Z3 1794 aa21.11■□□□□ 0.97
SFXN4-208ENST00000490417 MYOM3Q5VTT5 1437 aa21.11■□□□□ 0.97
SFXN4-208ENST00000490417 A2MP01023 1474 aa21.1■□□□□ 0.97
SFXN4-208ENST00000490417 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
SFXN4-208ENST00000490417 CNTLNQ9NXG0 1405 aa21.09■□□□□ 0.97
SFXN4-208ENST00000490417 INO80Q9ULG1 1556 aaPredicted RBP21.08■□□□□ 0.97
SFXN4-208ENST00000490417 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
SFXN4-208ENST00000490417 ADGBQ8N7X0 1667 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms