RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
CRNKL1-203ENST00000490258 POTEEQ6S8J3 1075 aa8.16□□□□□ -1.1
CRNKL1-203ENST00000490258 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
CRNKL1-203ENST00000490258 IFFO2Q5TF58 517 aa8.09□□□□□ -1.11
CRNKL1-203ENST00000490258 EFCAB3Q8N7B9 438 aa8.09□□□□□ -1.11
CRNKL1-203ENST00000490258 NUDT7P0C024 238 aa8.07□□□□□ -1.12
CRNKL1-203ENST00000490258 KCTD12Q96CX2 325 aaKnown RBP8.07□□□□□ -1.12
CRNKL1-203ENST00000490258 ARHGAP33O14559 1287 aa8.06□□□□□ -1.12
CRNKL1-203ENST00000490258 KLHL34Q8N239 644 aa8.06□□□□□ -1.12
CRNKL1-203ENST00000490258 LHX6Q9UPM6 363 aa8.06□□□□□ -1.12
CRNKL1-203ENST00000490258 HRO43593 1189 aa8.05□□□□□ -1.12
CRNKL1-203ENST00000490258 Q6ZNB5 142 aa8.05□□□□□ -1.12
CRNKL1-203ENST00000490258 A0A0G2JS52 829 aa8.04□□□□□ -1.12
CRNKL1-203ENST00000490258 TK2O00142 265 aa8.04□□□□□ -1.12
CRNKL1-203ENST00000490258 PTPN5P54829 565 aa7.98□□□□□ -1.13
CRNKL1-203ENST00000490258 MS4A4AQ96JQ5 239 aa7.98□□□□□ -1.13
CRNKL1-203ENST00000490258 STAC3Q96MF2 364 aa7.98□□□□□ -1.13
CRNKL1-203ENST00000490258 SOX12O15370 315 aa7.97□□□□□ -1.13
CRNKL1-203ENST00000490258 VASPP50552 380 aaPredicted RBP7.97□□□□□ -1.13
CRNKL1-203ENST00000490258 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
CRNKL1-203ENST00000490258 DMRTA1Q5VZB9 504 aa7.96□□□□□ -1.14
CRNKL1-203ENST00000490258 PCDHGA4Q9Y5G9 962 aa7.96□□□□□ -1.14
CRNKL1-203ENST00000490258 PSDA5PKW4 1024 aaPredicted RBP7.95□□□□□ -1.14
CRNKL1-203ENST00000490258 PSEN2P49810 448 aa7.93□□□□□ -1.14
CRNKL1-203ENST00000490258 SLC34A2O95436 690 aa7.92□□□□□ -1.14
CRNKL1-203ENST00000490258 CIZ1Q9ULV3 898 aaPredicted RBP7.91□□□□□ -1.14
CRNKL1-203ENST00000490258 PHF8Q9UPP1 1060 aa7.91□□□□□ -1.14
CRNKL1-203ENST00000490258 IFNLR1Q8IU57 520 aaPredicted RBP7.9□□□□□ -1.14
CRNKL1-203ENST00000490258 KIF3CO14782 793 aa7.89□□□□□ -1.15
CRNKL1-203ENST00000490258 C2orf72A6NCS6 295 aa7.87□□□□□ -1.15
CRNKL1-203ENST00000490258 LCE2BO14633 110 aa7.86□□□□□ -1.15
CRNKL1-203ENST00000490258 LAPTM4AQ15012 233 aa7.85□□□□□ -1.15
CRNKL1-203ENST00000490258 TRAF7Q6Q0C0 670 aa7.85□□□□□ -1.15
CRNKL1-203ENST00000490258 THSD4Q6ZMP0 1018 aa7.85□□□□□ -1.15
CRNKL1-203ENST00000490258 VPS9D1Q9Y2B5 631 aa7.82□□□□□ -1.16
CRNKL1-203ENST00000490258 KDM4FA0A1W2PPD8 638 aa7.81□□□□□ -1.16
CRNKL1-203ENST00000490258 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
CRNKL1-203ENST00000490258 SPOCK2Q92563 424 aa7.8□□□□□ -1.16
CRNKL1-203ENST00000490258 KCNH8Q96L42 1107 aa7.8□□□□□ -1.16
CRNKL1-203ENST00000490258 KCNK17Q96T54 332 aa7.79□□□□□ -1.16
CRNKL1-203ENST00000490258 NLRP6P59044 892 aa7.78□□□□□ -1.16
CRNKL1-203ENST00000490258 TRIM41Q8WV44 630 aa7.77□□□□□ -1.17
CRNKL1-203ENST00000490258 WNT2BQ93097 391 aa7.77□□□□□ -1.17
CRNKL1-203ENST00000490258 GOLGA8CPA6NN73 597 aa7.76□□□□□ -1.17
CRNKL1-203ENST00000490258 FBXO22Q8NEZ5 403 aa7.76□□□□□ -1.17
CRNKL1-203ENST00000490258 GFRA3O60609 400 aa7.75□□□□□ -1.17
CRNKL1-203ENST00000490258 ITGBL1O95965 494 aaPredicted RBP7.75□□□□□ -1.17
CRNKL1-203ENST00000490258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.74□□□□□ -1.17
CRNKL1-203ENST00000490258 ZFP91Q96JP5 570 aaPredicted RBP7.74□□□□□ -1.17
CRNKL1-203ENST00000490258 BHMG1C9JSJ3 638 aaPredicted RBP7.73□□□□□ -1.17
CRNKL1-203ENST00000490258 TMC2Q8TDI7 906 aa7.73□□□□□ -1.17
CRNKL1-203ENST00000490258 SLC4A5Q9BY07 1137 aa7.73□□□□□ -1.17
CRNKL1-203ENST00000490258 ZNF787Q6DD87 383 aa7.72□□□□□ -1.17
CRNKL1-203ENST00000490258 PTCD2Q8WV60 388 aaKnown RBP7.72□□□□□ -1.17
CRNKL1-203ENST00000490258 ZNF775Q96BV0 537 aaPredicted RBP7.71□□□□□ -1.18
CRNKL1-203ENST00000490258 RIOK3O14730 519 aaKnown RBP7.7□□□□□ -1.18
CRNKL1-203ENST00000490258 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
CRNKL1-203ENST00000490258 VGFO15240 615 aaPredicted RBP7.68□□□□□ -1.18
CRNKL1-203ENST00000490258 NRG2O14511 850 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-203ENST00000490258 RNF25Q96BH1 459 aaPredicted RBP7.64□□□□□ -1.19
CRNKL1-203ENST00000490258 KCNC4Q03721 635 aa7.63□□□□□ -1.19
CRNKL1-203ENST00000490258 MFRPQ9BY79 579 aa7.63□□□□□ -1.19
CRNKL1-203ENST00000490258 TBC1D12O60347 775 aa7.62□□□□□ -1.19
CRNKL1-203ENST00000490258 ZBED2Q9BTP6 218 aa7.62□□□□□ -1.19
CRNKL1-203ENST00000490258 NBPF3Q9H094 633 aa7.62□□□□□ -1.19
CRNKL1-203ENST00000490258 BCL2L12Q9HB09 334 aa7.62□□□□□ -1.19
CRNKL1-203ENST00000490258 PKD2Q13563 968 aa7.6□□□□□ -1.19
CRNKL1-203ENST00000490258 PTPREP23469 700 aa7.58□□□□□ -1.2
CRNKL1-203ENST00000490258 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
CRNKL1-203ENST00000490258 ZNF454Q8N9F8 522 aa7.58□□□□□ -1.2
CRNKL1-203ENST00000490258 ANKK1Q8NFD2 765 aa7.58□□□□□ -1.2
CRNKL1-203ENST00000490258 BCL11BQ9C0K0 894 aaPredicted RBP7.57□□□□□ -1.2
CRNKL1-203ENST00000490258 PLPP6Q8IY26 295 aa7.55□□□□□ -1.2
CRNKL1-203ENST00000490258 BCAMP50895 628 aa7.54□□□□□ -1.2
CRNKL1-203ENST00000490258 FOXK1P85037 733 aa7.54□□□□□ -1.2
CRNKL1-203ENST00000490258 PRKD2Q9BZL6 878 aa7.54□□□□□ -1.2
CRNKL1-203ENST00000490258 STK24Q9Y6E0 443 aa7.53□□□□□ -1.2
CRNKL1-203ENST00000490258 SOWAHBA6NEL2 793 aa7.51□□□□□ -1.21
CRNKL1-203ENST00000490258 LOC100996750A0A140TA64 210 aa7.5□□□□□ -1.21
CRNKL1-203ENST00000490258 FOSBP53539 338 aa7.5□□□□□ -1.21
CRNKL1-203ENST00000490258 KRTAP4-6Q9BYQ5 205 aa7.5□□□□□ -1.21
CRNKL1-203ENST00000490258 WBP1LQ9NX94 342 aa7.49□□□□□ -1.21
CRNKL1-203ENST00000490258 TAOK2Q9UL54 1235 aa7.49□□□□□ -1.21
CRNKL1-203ENST00000490258 RABGEF1Q9UJ41 708 aa7.48□□□□□ -1.21
CRNKL1-203ENST00000490258 V9GY48 417 aaPredicted RBP7.48□□□□□ -1.21
CRNKL1-203ENST00000490258 RGL2O15211 777 aa7.47□□□□□ -1.21
CRNKL1-203ENST00000490258 PDZRN3Q9UPQ7 1066 aa7.47□□□□□ -1.21
CRNKL1-203ENST00000490258 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
CRNKL1-203ENST00000490258 DSG2Q14126 1118 aa7.45□□□□□ -1.22
CRNKL1-203ENST00000490258 LAPTM4BQ86VI4 370 aa7.45□□□□□ -1.22
CRNKL1-203ENST00000490258 OXER1Q8TDS5 423 aa7.45□□□□□ -1.22
CRNKL1-203ENST00000490258 PPP1R37O75864 691 aa7.44□□□□□ -1.22
CRNKL1-203ENST00000490258 TREML4Q6UXN2 200 aa7.44□□□□□ -1.22
CRNKL1-203ENST00000490258 ADAM33Q9BZ11 813 aa7.44□□□□□ -1.22
CRNKL1-203ENST00000490258 LCE2AQ5TA79 106 aaPredicted RBP7.43□□□□□ -1.22
CRNKL1-203ENST00000490258 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
CRNKL1-203ENST00000490258 ZFRQ96KR1 1074 aaKnown RBP7.43□□□□□ -1.22
CRNKL1-203ENST00000490258 STK25O00506 426 aa7.42□□□□□ -1.22
CRNKL1-203ENST00000490258 ECM2O94769 699 aaPredicted RBP7.42□□□□□ -1.22
CRNKL1-203ENST00000490258 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms