RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 ADAMTSL3P82987 1691 aa29.66■■■□□ 2.34
COL9A2-209ENST00000490132 ARHGAP5Q13017 1502 aa29.66■■■□□ 2.34
COL9A2-209ENST00000490132 EFCAB2Q5VUJ9 269 aa29.65■■■□□ 2.34
COL9A2-209ENST00000490132 BCORL1Q5H9F3 1711 aa29.64■■■□□ 2.34
COL9A2-209ENST00000490132 ZFYVE16Q7Z3T8 1539 aa29.63■■■□□ 2.33
COL9A2-209ENST00000490132 PREX2Q70Z35 1606 aa29.63■■■□□ 2.33
COL9A2-209ENST00000490132 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
COL9A2-209ENST00000490132 YEATS2Q9ULM3 1422 aa29.62■■■□□ 2.33
COL9A2-209ENST00000490132 SIGLEC1Q9BZZ2 1709 aa29.6■■■□□ 2.33
COL9A2-209ENST00000490132 MAGI2Q86UL8 1455 aa29.6■■■□□ 2.33
COL9A2-209ENST00000490132 CDC42BPAQ5VT25 1732 aa29.59■■■□□ 2.33
COL9A2-209ENST00000490132 ARID4BQ4LE39 1312 aaPredicted RBP29.55■■■□□ 2.32
COL9A2-209ENST00000490132 MADDQ8WXG6 1647 aa29.55■■■□□ 2.32
COL9A2-209ENST00000490132 KDM5CP41229 1560 aa29.52■■■□□ 2.32
COL9A2-209ENST00000490132 ZNF518AQ6AHZ1 1483 aa29.52■■■□□ 2.32
COL9A2-209ENST00000490132 HECW2Q9P2P5 1572 aa29.52■■■□□ 2.32
COL9A2-209ENST00000490132 PTPRMP28827 1452 aa29.51■■■□□ 2.31
COL9A2-209ENST00000490132 ABCC1P33527 1531 aa29.5■■■□□ 2.31
COL9A2-209ENST00000490132 ITSN2Q9NZM3 1697 aa29.49■■■□□ 2.31
COL9A2-209ENST00000490132 ARHGEF12Q9NZN5 1544 aa29.47■■■□□ 2.31
COL9A2-209ENST00000490132 LOC105371045A0A1W2PR82 267 aa29.46■■■□□ 2.31
COL9A2-209ENST00000490132 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
COL9A2-209ENST00000490132 RIMS1Q86UR5 1692 aaKnown RBP29.46■■■□□ 2.31
COL9A2-209ENST00000490132 GPATCH8Q9UKJ3 1502 aaKnown RBP29.45■■■□□ 2.3
COL9A2-209ENST00000490132 ATP10AO60312 1499 aa29.44■■■□□ 2.3
COL9A2-209ENST00000490132 C9orf84Q5VXU9 1444 aa29.43■■■□□ 2.3
COL9A2-209ENST00000490132 TRAPPC8Q9Y2L5 1435 aa29.43■■■□□ 2.3
COL9A2-209ENST00000490132 SAMD9LQ8IVG5 1584 aa29.42■■■□□ 2.3
COL9A2-209ENST00000490132 MTUS2Q5JR59 1369 aa29.41■■■□□ 2.3
COL9A2-209ENST00000490132 DIP2CQ9Y2E4 1556 aa29.39■■■□□ 2.3
COL9A2-209ENST00000490132 EHBP1L1Q8N3D4 1523 aa29.39■■■□□ 2.3
COL9A2-209ENST00000490132 ABCA6Q8N139 1617 aa29.38■■■□□ 2.29
COL9A2-209ENST00000490132 MLH3Q9UHC1 1453 aa29.37■■■□□ 2.29
COL9A2-209ENST00000490132 FER1L4A9Z1Z3 1794 aa29.36■■■□□ 2.29
COL9A2-209ENST00000490132 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
COL9A2-209ENST00000490132 MLECQ14165 292 aa29.34■■■□□ 2.29
COL9A2-209ENST00000490132 CCNB3Q8WWL7 1395 aa29.34■■■□□ 2.29
COL9A2-209ENST00000490132 TIAM1Q13009 1591 aa29.34■■■□□ 2.29
COL9A2-209ENST00000490132 ZNF777Q9ULD5 760 aaPredicted RBP29.33■■■□□ 2.29
COL9A2-209ENST00000490132 KIDINS220Q9ULH0 1771 aa29.33■■■□□ 2.29
COL9A2-209ENST00000490132 REREQ9P2R6 1566 aa29.32■■■□□ 2.28
COL9A2-209ENST00000490132 MYT1LQ9UL68 1186 aa29.31■■■□□ 2.28
COL9A2-209ENST00000490132 VPS8Q8N3P4 1428 aa29.29■■■□□ 2.28
COL9A2-209ENST00000490132 CFDP1Q9UEE9 299 aaPredicted RBP29.28■■■□□ 2.28
COL9A2-209ENST00000490132 KIAA1107Q9UPP5 1409 aa29.25■■■□□ 2.27
COL9A2-209ENST00000490132 PLEKHH2Q8IVE3 1493 aa29.24■■■□□ 2.27
COL9A2-209ENST00000490132 HNRNPMP52272 730 aaKnown RBP eCLIP29.24■■■□□ 2.27
COL9A2-209ENST00000490132 SUPT6HQ7KZ85 1726 aaKnown RBP29.23■■■□□ 2.27
COL9A2-209ENST00000490132 LMTK3Q96Q04 1460 aa29.21■■■□□ 2.27
COL9A2-209ENST00000490132 AGLP35573 1532 aa29.2■■■□□ 2.27
COL9A2-209ENST00000490132 PLPPR3Q6T4P5 718 aa29.2■■■□□ 2.26
COL9A2-209ENST00000490132 NCOA2Q15596 1464 aa29.2■■■□□ 2.26
COL9A2-209ENST00000490132 INO80Q9ULG1 1556 aaPredicted RBP29.19■■■□□ 2.26
COL9A2-209ENST00000490132 ZNF644Q9H582 1327 aaPredicted RBP29.18■■■□□ 2.26
COL9A2-209ENST00000490132 ATP7AQ04656 1500 aa29.17■■■□□ 2.26
COL9A2-209ENST00000490132 SPAG9O60271 1321 aaKnown RBP29.17■■■□□ 2.26
COL9A2-209ENST00000490132 LRRC9Q6ZRR7 1453 aa29.13■■■□□ 2.25
COL9A2-209ENST00000490132 MBD5Q9P267 1494 aa29.13■■■□□ 2.25
COL9A2-209ENST00000490132 MAP3K1Q13233 1512 aa29.1■■■□□ 2.25
COL9A2-209ENST00000490132 PLXNC1O60486 1568 aa29.08■■■□□ 2.25
COL9A2-209ENST00000490132 CEBPAP49715 358 aaPredicted RBP29.07■■■□□ 2.24
COL9A2-209ENST00000490132 CAMSAP2Q08AD1 1489 aa29.07■■■□□ 2.24
COL9A2-209ENST00000490132 C3P01024 1663 aa29.05■■■□□ 2.24
COL9A2-209ENST00000490132 KANK4Q5T7N3 995 aaPredicted RBP29.04■■■□□ 2.24
COL9A2-209ENST00000490132 A2MP01023 1474 aa29.04■■■□□ 2.24
COL9A2-209ENST00000490132 ADGBQ8N7X0 1667 aa29.03■■■□□ 2.24
COL9A2-209ENST00000490132 PREX1Q8TCU6 1659 aa29.03■■■□□ 2.24
COL9A2-209ENST00000490132 HSPA2P54652 639 aa29.01■■■□□ 2.23
COL9A2-209ENST00000490132 CCDC141Q6ZP82 1450 aa29■■■□□ 2.23
COL9A2-209ENST00000490132 RTEL1-TNFRSF6BF6WH68 1400 aa28.98■■■□□ 2.23
COL9A2-209ENST00000490132 SETD1BQ9UPS6 1966 aaKnown RBP28.98■■■□□ 2.23
COL9A2-209ENST00000490132 CNTLNQ9NXG0 1405 aa28.96■■■□□ 2.23
COL9A2-209ENST00000490132 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
COL9A2-209ENST00000490132 MROH2AA6NES4 1674 aa28.95■■■□□ 2.22
COL9A2-209ENST00000490132 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
COL9A2-209ENST00000490132 CLTCQ00610 1675 aaKnown RBP28.91■■■□□ 2.22
COL9A2-209ENST00000490132 MYOM3Q5VTT5 1437 aa28.9■■■□□ 2.22
COL9A2-209ENST00000490132 UHRF1BP1Q6BDS2 1440 aa28.88■■■□□ 2.21
COL9A2-209ENST00000490132 RSPH4AQ5TD94 716 aa28.88■■■□□ 2.21
COL9A2-209ENST00000490132 DHX29Q7Z478 1369 aaKnown RBP28.87■■■□□ 2.21
COL9A2-209ENST00000490132 MIA2Q96PC5 1412 aa28.86■■■□□ 2.21
COL9A2-209ENST00000490132 GGT6Q6P531 493 aa28.85■■■□□ 2.21
COL9A2-209ENST00000490132 ILDR1Q86SU0 546 aaPredicted RBP28.84■■■□□ 2.21
COL9A2-209ENST00000490132 ZMYM3Q14202 1370 aa28.84■■■□□ 2.21
COL9A2-209ENST00000490132 MAST1Q9Y2H9 1570 aa28.82■■■□□ 2.2
COL9A2-209ENST00000490132 APLP2Q06481 763 aa28.81■■■□□ 2.2
COL9A2-209ENST00000490132 STRCQ7RTU9 1775 aa28.8■■■□□ 2.2
COL9A2-209ENST00000490132 NPATQ14207 1427 aa28.79■■■□□ 2.2
COL9A2-209ENST00000490132 TSPY4P0CV99 314 aa28.78■■■□□ 2.2
COL9A2-209ENST00000490132 TSPY10P0CW01 314 aa28.78■■■□□ 2.2
COL9A2-209ENST00000490132 KIF3BO15066 747 aa28.75■■■□□ 2.19
COL9A2-209ENST00000490132 PPP6R1Q9UPN7 881 aa28.75■■■□□ 2.19
COL9A2-209ENST00000490132 PTPN23Q9H3S7 1636 aa28.75■■■□□ 2.19
COL9A2-209ENST00000490132 PTPRKQ15262 1439 aa28.74■■■□□ 2.19
COL9A2-209ENST00000490132 CROCC2H7BZ55 1655 aa28.71■■■□□ 2.19
COL9A2-209ENST00000490132 MYO3AQ8NEV4 1616 aa28.71■■■□□ 2.19
COL9A2-209ENST00000490132 KDM5DQ9BY66 1539 aa28.69■■■□□ 2.18
COL9A2-209ENST00000490132 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
COL9A2-209ENST00000490132 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
COL9A2-209ENST00000490132 ZNF142P52746 1687 aaPredicted RBP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms