RNA–Protein interactions for RNA: ENST00000489917.1

SPATA9-206, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,046 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-206ENST00000489917 SNPHO15079 494 aa10.04□□□□□ -0.8
SPATA9-206ENST00000489917 LCE2DQ5TA82 110 aaPredicted RBP10.04□□□□□ -0.8
SPATA9-206ENST00000489917 SPRYD3Q8NCJ5 442 aa10.04□□□□□ -0.8
SPATA9-206ENST00000489917 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
SPATA9-206ENST00000489917 PAXIP1Q6ZW49 1069 aaPredicted RBP10.01□□□□□ -0.81
SPATA9-206ENST00000489917 TMC2Q8TDI7 906 aa10.01□□□□□ -0.81
SPATA9-206ENST00000489917 CFAP44Q96MT7 982 aa10.01□□□□□ -0.81
SPATA9-206ENST00000489917 POTEMA6NI47 508 aa10□□□□□ -0.81
SPATA9-206ENST00000489917 ST18O60284 1047 aa10□□□□□ -0.81
SPATA9-206ENST00000489917 HOXB3P14651 431 aaPredicted RBP10□□□□□ -0.81
SPATA9-206ENST00000489917 POTEGQ6S5H5 508 aa9.98□□□□□ -0.81
SPATA9-206ENST00000489917 GPHNQ9NQX3 736 aaPredicted RBP9.97□□□□□ -0.81
SPATA9-206ENST00000489917 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
SPATA9-206ENST00000489917 CRISPLD2Q9H0B8 497 aa9.96□□□□□ -0.82
SPATA9-206ENST00000489917 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
SPATA9-206ENST00000489917 NCKAP5LQ9HCH0 1330 aa9.95□□□□□ -0.82
SPATA9-206ENST00000489917 FOXK1P85037 733 aa9.93□□□□□ -0.82
SPATA9-206ENST00000489917 DSG2Q14126 1118 aa9.93□□□□□ -0.82
SPATA9-206ENST00000489917 PDE4AP27815 886 aa9.92□□□□□ -0.82
SPATA9-206ENST00000489917 ZNF710Q8N1W2 664 aa9.92□□□□□ -0.82
SPATA9-206ENST00000489917 RIMBP2O15034 1052 aa9.9□□□□□ -0.82
SPATA9-206ENST00000489917 PLPP6Q8IY26 295 aa9.9□□□□□ -0.82
SPATA9-206ENST00000489917 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
SPATA9-206ENST00000489917 MARVELD3Q96A59 401 aa9.88□□□□□ -0.83
SPATA9-206ENST00000489917 ZSWIM6Q9HCJ5 1215 aa9.88□□□□□ -0.83
SPATA9-206ENST00000489917 SLC34A2O95436 690 aa9.87□□□□□ -0.83
SPATA9-206ENST00000489917 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
SPATA9-206ENST00000489917 PPP1R15BQ5SWA1 713 aa9.87□□□□□ -0.83
SPATA9-206ENST00000489917 GPR153Q6NV75 609 aa9.87□□□□□ -0.83
SPATA9-206ENST00000489917 MFSD10Q14728 455 aa9.86□□□□□ -0.83
SPATA9-206ENST00000489917 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
SPATA9-206ENST00000489917 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
SPATA9-206ENST00000489917 EMP3P54852 163 aa9.84□□□□□ -0.83
SPATA9-206ENST00000489917 KHSRPQ92945 711 aaKnown RBP eCLIP9.83□□□□□ -0.84
SPATA9-206ENST00000489917 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
SPATA9-206ENST00000489917 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
SPATA9-206ENST00000489917 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
SPATA9-206ENST00000489917 PTCD2Q8WV60 388 aaKnown RBP9.81□□□□□ -0.84
SPATA9-206ENST00000489917 TSHZ2Q9NRE2 1034 aa9.81□□□□□ -0.84
SPATA9-206ENST00000489917 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
SPATA9-206ENST00000489917 NUDT7P0C024 238 aa9.78□□□□□ -0.84
SPATA9-206ENST00000489917 POTEB3A0JP26 581 aa9.77□□□□□ -0.85
SPATA9-206ENST00000489917 POTEBQ6S5H4 581 aa9.77□□□□□ -0.85
SPATA9-206ENST00000489917 OXER1Q8TDS5 423 aa9.77□□□□□ -0.85
SPATA9-206ENST00000489917 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
SPATA9-206ENST00000489917 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
SPATA9-206ENST00000489917 ERBB3P21860 1342 aa9.76□□□□□ -0.85
SPATA9-206ENST00000489917 CDAN1Q8IWY9 1227 aa9.75□□□□□ -0.85
SPATA9-206ENST00000489917 EMILIN3Q9NT22 766 aa9.75□□□□□ -0.85
SPATA9-206ENST00000489917 KDM4FA0A1W2PPD8 638 aa9.74□□□□□ -0.85
SPATA9-206ENST00000489917 TBC1D12O60347 775 aa9.74□□□□□ -0.85
SPATA9-206ENST00000489917 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
SPATA9-206ENST00000489917 ZNF316A6NFI3 1004 aaPredicted RBP9.72□□□□□ -0.85
SPATA9-206ENST00000489917 VARS2Q5ST30 1063 aaKnown RBP9.72□□□□□ -0.85
SPATA9-206ENST00000489917 WDR70Q9NW82 654 aa9.71□□□□□ -0.86
SPATA9-206ENST00000489917 LHX6Q9UPM6 363 aa9.71□□□□□ -0.86
SPATA9-206ENST00000489917 MAP3K9P80192 1104 aa9.68□□□□□ -0.86
SPATA9-206ENST00000489917 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
SPATA9-206ENST00000489917 E2F4Q16254 413 aa9.67□□□□□ -0.86
SPATA9-206ENST00000489917 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
SPATA9-206ENST00000489917 EVI5O60447 810 aa9.66□□□□□ -0.86
SPATA9-206ENST00000489917 DPYSL4O14531 572 aa9.65□□□□□ -0.86
SPATA9-206ENST00000489917 ZNF687Q8N1G0 1237 aa9.64□□□□□ -0.87
SPATA9-206ENST00000489917 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
SPATA9-206ENST00000489917 KRTAP3-3Q9BYR6 98 aa9.62□□□□□ -0.87
SPATA9-206ENST00000489917 KRTAP3-2Q9BYR7 98 aa9.62□□□□□ -0.87
SPATA9-206ENST00000489917 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
SPATA9-206ENST00000489917 ARIH1Q9Y4X5 557 aaPredicted RBP9.59□□□□□ -0.87
SPATA9-206ENST00000489917 ZNF454Q8N9F8 522 aa9.58□□□□□ -0.88
SPATA9-206ENST00000489917 FOSBP53539 338 aa9.57□□□□□ -0.88
SPATA9-206ENST00000489917 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
SPATA9-206ENST00000489917 POTEEQ6S8J3 1075 aa9.57□□□□□ -0.88
SPATA9-206ENST00000489917 PDIA6Q15084 440 aa9.56□□□□□ -0.88
SPATA9-206ENST00000489917 KCNV2Q8TDN2 545 aa9.56□□□□□ -0.88
SPATA9-206ENST00000489917 JPH4Q96JJ6 628 aa9.56□□□□□ -0.88
SPATA9-206ENST00000489917 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
SPATA9-206ENST00000489917 AXIN2Q9Y2T1 843 aa9.55□□□□□ -0.88
SPATA9-206ENST00000489917 SPDYE16A6NNV3 312 aaPredicted RBP9.53□□□□□ -0.88
SPATA9-206ENST00000489917 PBX2P40425 430 aa9.53□□□□□ -0.88
SPATA9-206ENST00000489917 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
SPATA9-206ENST00000489917 PTGER2P43116 358 aa9.52□□□□□ -0.89
SPATA9-206ENST00000489917 SPNS2Q8IVW8 549 aa9.52□□□□□ -0.89
SPATA9-206ENST00000489917 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
SPATA9-206ENST00000489917 ARHGAP33O14559 1287 aa9.51□□□□□ -0.89
SPATA9-206ENST00000489917 PHF14O94880 888 aa9.51□□□□□ -0.89
SPATA9-206ENST00000489917 DDX12PQ92771 950 aa9.51□□□□□ -0.89
SPATA9-206ENST00000489917 ZDHHC16Q969W1 377 aa9.51□□□□□ -0.89
SPATA9-206ENST00000489917 PSEN2P49810 448 aa9.5□□□□□ -0.89
SPATA9-206ENST00000489917 P3H3Q8IVL6 736 aa9.5□□□□□ -0.89
SPATA9-206ENST00000489917 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
SPATA9-206ENST00000489917 ADAM33Q9BZ11 813 aa9.5□□□□□ -0.89
SPATA9-206ENST00000489917 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
SPATA9-206ENST00000489917 LSM11P83369 360 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPATA9-206ENST00000489917 TYW1BQ6NUM6 668 aa9.48□□□□□ -0.89
SPATA9-206ENST00000489917 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
SPATA9-206ENST00000489917 ANKRD13DQ6ZTN6 518 aa9.47□□□□□ -0.89
SPATA9-206ENST00000489917 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
SPATA9-206ENST00000489917 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
SPATA9-206ENST00000489917 EPAS1Q99814 870 aa9.46□□□□□ -0.9
SPATA9-206ENST00000489917 PTPREP23469 700 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms