RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 FRMPD1Q5SYB0 1578 aa30.32■■■□□ 2.44
EPHB4-207ENST00000489808 GPATCH8Q9UKJ3 1502 aaKnown RBP30.27■■■□□ 2.44
EPHB4-207ENST00000489808 POGZQ7Z3K3 1410 aa30.26■■■□□ 2.43
EPHB4-207ENST00000489808 AFAP1Q8N556 730 aa30.26■■■□□ 2.43
EPHB4-207ENST00000489808 CCNB3Q8WWL7 1395 aa30.25■■■□□ 2.43
EPHB4-207ENST00000489808 RICTORQ6R327 1708 aa30.23■■■□□ 2.43
EPHB4-207ENST00000489808 CFDP1Q9UEE9 299 aaPredicted RBP30.23■■■□□ 2.43
EPHB4-207ENST00000489808 ZNF777Q9ULD5 760 aaPredicted RBP30.23■■■□□ 2.43
EPHB4-207ENST00000489808 CDC42BPBQ9Y5S2 1711 aa30.21■■■□□ 2.43
EPHB4-207ENST00000489808 MAGI2Q86UL8 1455 aa30.2■■■□□ 2.43
EPHB4-207ENST00000489808 PREX2Q70Z35 1606 aa30.19■■■□□ 2.42
EPHB4-207ENST00000489808 EHBP1L1Q8N3D4 1523 aa30.19■■■□□ 2.42
EPHB4-207ENST00000489808 ZMYM4Q5VZL5 1548 aa30.18■■■□□ 2.42
EPHB4-207ENST00000489808 YEATS2Q9ULM3 1422 aa30.16■■■□□ 2.42
EPHB4-207ENST00000489808 ARID4BQ4LE39 1312 aaPredicted RBP30.16■■■□□ 2.42
EPHB4-207ENST00000489808 ZNF518AQ6AHZ1 1483 aa30.15■■■□□ 2.42
EPHB4-207ENST00000489808 ARHGEF12Q9NZN5 1544 aa30.15■■■□□ 2.42
EPHB4-207ENST00000489808 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
EPHB4-207ENST00000489808 CDC42BPAQ5VT25 1732 aa30.14■■■□□ 2.42
EPHB4-207ENST00000489808 KANK4Q5T7N3 995 aaPredicted RBP30.14■■■□□ 2.42
EPHB4-207ENST00000489808 TRAPPC8Q9Y2L5 1435 aa30.13■■■□□ 2.41
EPHB4-207ENST00000489808 HNRNPMP52272 730 aaKnown RBP eCLIP30.13■■■□□ 2.41
EPHB4-207ENST00000489808 MAP3K1Q13233 1512 aa30.12■■■□□ 2.41
EPHB4-207ENST00000489808 ZFYVE16Q7Z3T8 1539 aa30.12■■■□□ 2.41
EPHB4-207ENST00000489808 MYT1LQ9UL68 1186 aa30.11■■■□□ 2.41
EPHB4-207ENST00000489808 LRRC9Q6ZRR7 1453 aa30.11■■■□□ 2.41
EPHB4-207ENST00000489808 APLP2Q06481 763 aa30.1■■■□□ 2.41
EPHB4-207ENST00000489808 ABCC1P33527 1531 aa30.1■■■□□ 2.41
EPHB4-207ENST00000489808 ARHGEF40Q8TER5 1519 aa30.1■■■□□ 2.41
EPHB4-207ENST00000489808 NCOA2Q15596 1464 aa30.08■■■□□ 2.41
EPHB4-207ENST00000489808 KIAA1107Q9UPP5 1409 aa30.07■■■□□ 2.4
EPHB4-207ENST00000489808 ZNF644Q9H582 1327 aaPredicted RBP30.07■■■□□ 2.4
EPHB4-207ENST00000489808 ATP10AO60312 1499 aa30.06■■■□□ 2.4
EPHB4-207ENST00000489808 KDM5CP41229 1560 aa30.05■■■□□ 2.4
EPHB4-207ENST00000489808 SAMD9LQ8IVG5 1584 aa30.04■■■□□ 2.4
EPHB4-207ENST00000489808 PLEKHH2Q8IVE3 1493 aa30.04■■■□□ 2.4
EPHB4-207ENST00000489808 MLH3Q9UHC1 1453 aa30.04■■■□□ 2.4
EPHB4-207ENST00000489808 SUPT6HQ7KZ85 1726 aaKnown RBP30■■■□□ 2.39
EPHB4-207ENST00000489808 SPAG9O60271 1321 aaKnown RBP29.98■■■□□ 2.39
EPHB4-207ENST00000489808 C9orf84Q5VXU9 1444 aa29.98■■■□□ 2.39
EPHB4-207ENST00000489808 SYCP2Q9BX26 1530 aa29.98■■■□□ 2.39
EPHB4-207ENST00000489808 ITSN2Q9NZM3 1697 aa29.97■■■□□ 2.39
EPHB4-207ENST00000489808 MLECQ14165 292 aa29.95■■■□□ 2.39
EPHB4-207ENST00000489808 HECW2Q9P2P5 1572 aa29.94■■■□□ 2.38
EPHB4-207ENST00000489808 MBD5Q9P267 1494 aa29.93■■■□□ 2.38
EPHB4-207ENST00000489808 ADAMTSL3P82987 1691 aa29.91■■■□□ 2.38
EPHB4-207ENST00000489808 RSPH4AQ5TD94 716 aa29.91■■■□□ 2.38
EPHB4-207ENST00000489808 BCORL1Q5H9F3 1711 aa29.91■■■□□ 2.38
EPHB4-207ENST00000489808 SIGLEC1Q9BZZ2 1709 aa29.88■■■□□ 2.37
EPHB4-207ENST00000489808 DIP2CQ9Y2E4 1556 aa29.87■■■□□ 2.37
EPHB4-207ENST00000489808 PTPRMP28827 1452 aa29.86■■■□□ 2.37
EPHB4-207ENST00000489808 KIDINS220Q9ULH0 1771 aa29.84■■■□□ 2.37
EPHB4-207ENST00000489808 CAMSAP2Q08AD1 1489 aa29.83■■■□□ 2.37
EPHB4-207ENST00000489808 MYOM3Q5VTT5 1437 aa29.83■■■□□ 2.37
EPHB4-207ENST00000489808 ABCA6Q8N139 1617 aa29.82■■■□□ 2.36
EPHB4-207ENST00000489808 MIA2Q96PC5 1412 aa29.82■■■□□ 2.36
EPHB4-207ENST00000489808 REREQ9P2R6 1566 aa29.81■■■□□ 2.36
EPHB4-207ENST00000489808 RTEL1-TNFRSF6BF6WH68 1400 aa29.79■■■□□ 2.36
EPHB4-207ENST00000489808 MADDQ8WXG6 1647 aa29.79■■■□□ 2.36
EPHB4-207ENST00000489808 ATP7AQ04656 1500 aa29.78■■■□□ 2.36
EPHB4-207ENST00000489808 TSPY4P0CV99 314 aa29.78■■■□□ 2.36
EPHB4-207ENST00000489808 TSPY10P0CW01 314 aa29.78■■■□□ 2.36
EPHB4-207ENST00000489808 AGLP35573 1532 aa29.77■■■□□ 2.36
EPHB4-207ENST00000489808 CCDC141Q6ZP82 1450 aa29.76■■■□□ 2.35
EPHB4-207ENST00000489808 INO80Q9ULG1 1556 aaPredicted RBP29.73■■■□□ 2.35
EPHB4-207ENST00000489808 PLPPR3Q6T4P5 718 aa29.72■■■□□ 2.35
EPHB4-207ENST00000489808 A2MP01023 1474 aa29.72■■■□□ 2.35
EPHB4-207ENST00000489808 ARHGEF5Q12774 1597 aa29.69■■■□□ 2.34
EPHB4-207ENST00000489808 RIMS1Q86UR5 1692 aaKnown RBP29.68■■■□□ 2.34
EPHB4-207ENST00000489808 DHX29Q7Z478 1369 aaKnown RBP29.67■■■□□ 2.34
EPHB4-207ENST00000489808 ESF1Q9H501 851 aaKnown RBP29.67■■■□□ 2.34
EPHB4-207ENST00000489808 CEBPAP49715 358 aaPredicted RBP29.66■■■□□ 2.34
EPHB4-207ENST00000489808 FGD6Q6ZV73 1430 aa29.64■■■□□ 2.34
EPHB4-207ENST00000489808 GGT6Q6P531 493 aa29.63■■■□□ 2.33
EPHB4-207ENST00000489808 PLXNC1O60486 1568 aa29.6■■■□□ 2.33
EPHB4-207ENST00000489808 FER1L4A9Z1Z3 1794 aa29.59■■■□□ 2.33
EPHB4-207ENST00000489808 PPP6R1Q9UPN7 881 aa29.59■■■□□ 2.33
EPHB4-207ENST00000489808 TCOF1Q13428 1488 aaKnown RBP29.57■■■□□ 2.32
EPHB4-207ENST00000489808 ABCC5O15440 1437 aa29.57■■■□□ 2.32
EPHB4-207ENST00000489808 KIF3BO15066 747 aa29.57■■■□□ 2.32
EPHB4-207ENST00000489808 PTPN23Q9H3S7 1636 aa29.56■■■□□ 2.32
EPHB4-207ENST00000489808 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
EPHB4-207ENST00000489808 ADGBQ8N7X0 1667 aa29.56■■■□□ 2.32
EPHB4-207ENST00000489808 CNTLNQ9NXG0 1405 aa29.55■■■□□ 2.32
EPHB4-207ENST00000489808 FAM50AQ14320 339 aaKnown RBP29.52■■■□□ 2.32
EPHB4-207ENST00000489808 MAST1Q9Y2H9 1570 aa29.52■■■□□ 2.32
EPHB4-207ENST00000489808 ZMYM3Q14202 1370 aa29.51■■■□□ 2.31
EPHB4-207ENST00000489808 DAPK1P53355 1430 aa29.49■■■□□ 2.31
EPHB4-207ENST00000489808 RRP7BPQ9NSQ0 103 aa29.47■■■□□ 2.31
EPHB4-207ENST00000489808 LMTK3Q96Q04 1460 aa29.47■■■□□ 2.31
EPHB4-207ENST00000489808 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
EPHB4-207ENST00000489808 SHANK2Q9UPX8 1470 aa29.44■■■□□ 2.3
EPHB4-207ENST00000489808 HSPA2P54652 639 aa29.42■■■□□ 2.3
EPHB4-207ENST00000489808 WASHC2CQ9Y4E1 1318 aa29.41■■■□□ 2.3
EPHB4-207ENST00000489808 KIF15Q9NS87 1388 aa29.4■■■□□ 2.3
EPHB4-207ENST00000489808 DNMT1P26358 1616 aaKnown RBP29.4■■■□□ 2.3
EPHB4-207ENST00000489808 ANKRD30AQ9BXX3 1397 aa29.38■■■□□ 2.29
EPHB4-207ENST00000489808 C3P01024 1663 aa29.37■■■□□ 2.29
EPHB4-207ENST00000489808 DUOX2Q9NRD8 1548 aa29.37■■■□□ 2.29
EPHB4-207ENST00000489808 NPATQ14207 1427 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms